ClinVar Miner

List of variants studied for osteogenesis imperfecta by Neuberg Centre For Genomic Medicine, NCGM

Included ClinVar conditions (108):
Minimum submission review status: Collection method:
Minimum conflict level:
ClinVar version:
Total variants: 48
Download table as spreadsheet
HGVS dbSNP gnomAD frequency
NM_015909.4(NBAS):c.2012T>G (p.Phe671Cys) rs143212851 0.00017
NM_000089.4(COL1A2):c.1246G>A (p.Val416Ile) rs550867796 0.00003
NM_000089.4(COL1A2):c.3019G>A (p.Asp1007Asn) rs779934676 0.00002
NM_015909.4(NBAS):c.4222C>T (p.Arg1408Cys) rs369879081 0.00001
NM_182943.3(PLOD2):c.1855C>T (p.Arg619Cys) rs759871520 0.00001
NM_182943.3(PLOD2):c.1856G>A (p.Arg619His) rs121434461 0.00001
NM_000088.4(COL1A1):c.1238G>C (p.Gly413Ala) rs72648325
NM_000088.4(COL1A1):c.1243C>T (p.Arg415Ter) rs72648326
NM_000088.4(COL1A1):c.1516-5A>G
NM_000088.4(COL1A1):c.2155G>A (p.Gly719Ser) rs72651645
NM_000088.4(COL1A1):c.4323T>A (p.Asp1441Glu)
NM_000088.4(COL1A1):c.590G>T (p.Gly197Val) rs72667028
NM_000088.4(COL1A1):c.757C>T (p.Arg253Ter) rs72645318
NM_000088.4(COL1A1):c.859G>A (p.Gly287Ser) rs72645340
NM_000089.4(COL1A2):c.1406G>C (p.Gly469Ala) rs72658119
NM_000089.4(COL1A2):c.1576G>A (p.Gly526Arg) rs72658129
NM_000089.4(COL1A2):c.1577G>T (p.Gly526Val)
NM_000089.4(COL1A2):c.2035G>A (p.Gly679Ser) rs1584325552
NM_000089.4(COL1A2):c.2404G>A (p.Gly802Ser)
NM_000089.4(COL1A2):c.2835+1G>A rs72659310
NM_000089.4(COL1A2):c.3304G>A (p.Gly1102Ser) rs67768540
NM_001235.5(SERPINH1):c.1244G>A (p.Arg415Gln)
NM_002335.4(LRP5):c.3028-1G>A
NM_002335.4(LRP5):c.346G>A (p.Asp116Asn)
NM_002335.4(LRP5):c.527T>A (p.Ile176Asn)
NM_002615.7(SERPINF1):c.252T>G (p.Ser84Arg)
NM_002615.7(SERPINF1):c.786G>C (p.Lys262Asn)
NM_003052.5(SLC34A1):c.1052G>A (p.Gly351Glu)
NM_003052.5(SLC34A1):c.596A>C (p.Asn199Thr)
NM_005430.4(WNT1):c.506dup (p.Cys170fs) rs779969402
NM_006371.5(CRTAP):c.1016dup (p.Tyr340fs)
NM_006371.5(CRTAP):c.444C>G (p.Tyr148Ter) rs972668240
NM_007055.4(POLR3A):c.3325del (p.Leu1109fs)
NM_015909.4(NBAS):c.3577A>G (p.Met1193Val)
NM_015909.4(NBAS):c.6237-3C>G
NM_015909.4(NBAS):c.6840G>A (p.Thr2280=) rs776597537
NM_021939.4(FKBP10):c.1034del (p.Pro345fs)
NM_021939.4(FKBP10):c.1619_1623delinsT (p.Gly540fs)
NM_021939.4(FKBP10):c.21dup (p.Ser8fs) rs782271121
NM_022356.4(P3H1):c.1346-1G>C rs886042897
NM_022356.4(P3H1):c.1383_1389dup (p.Lys464fs)
NM_022356.4(P3H1):c.1667del (p.Asp556fs) rs2124093521
NM_022356.4(P3H1):c.1915-1G>A rs2124077667
NM_022356.4(P3H1):c.2024G>A (p.Trp675Ter)
NM_022356.4(P3H1):c.2065C>T (p.Gln689Ter)
NM_022356.4(P3H1):c.2174_2177del (p.Leu725fs) rs1570452214
NM_022356.4(P3H1):c.572del (p.Gly191fs)
NM_152281.3(GORAB):c.1A>G (p.Met1Val)

The information on this website is not intended for direct diagnostic use or medical decision-making without review by a genetics professional. Individuals should not change their health behavior solely on the basis of information contained on this website. Neither the University of Utah nor the National Institutes of Health independently verfies the submitted information. If you have questions about the information contained on this website, please see a health care professional.