ClinVar Miner

List of variants reported as likely pathogenic for PHGDH deficiency

Included ClinVar conditions (2):
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Total variants: 28
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HGVS dbSNP gnomAD frequency
NM_006623.4(PHGDH):c.1468G>A (p.Val490Met) rs121907987 0.00006
NM_006623.4(PHGDH):c.1129G>A (p.Gly377Ser) rs267606948 0.00002
NM_006623.4(PHGDH):c.374C>T (p.Thr125Met) rs764618040 0.00002
NM_006623.4(PHGDH):c.1030C>T (p.Arg344Ter) rs769256568 0.00001
NM_006623.4(PHGDH):c.357-1G>A rs766427173 0.00001
NM_006623.4(PHGDH):c.797C>T (p.Pro266Leu) rs775936961 0.00001
NC_000001.10:g.(?_120254418)_(120254784_120263792)del
NM_006623.4(PHGDH):c.1078+1G>A rs1224279673
NM_006623.4(PHGDH):c.1079-2A>G rs2101220673
NM_006623.4(PHGDH):c.138+1G>T
NM_006623.4(PHGDH):c.139-2A>G
NM_006623.4(PHGDH):c.1394del (p.Leu465fs)
NM_006623.4(PHGDH):c.1437_1440del (p.Pro479_Thr480insTer) rs2101225889
NM_006623.4(PHGDH):c.290+2T>C rs886041874
NM_006623.4(PHGDH):c.291-1G>A rs2101160151
NM_006623.4(PHGDH):c.2T>C (p.Met1Thr) rs951372478
NM_006623.4(PHGDH):c.356+2T>G rs1651264976
NM_006623.4(PHGDH):c.411+2T>C rs1302054606
NM_006623.4(PHGDH):c.412-1G>A
NM_006623.4(PHGDH):c.412-1G>C rs1651455730
NM_006623.4(PHGDH):c.418G>A (p.Gly140Arg) rs587777770
NM_006623.4(PHGDH):c.511-2A>G rs2101195348
NM_006623.4(PHGDH):c.643+1G>A
NM_006623.4(PHGDH):c.781G>A (p.Val261Met) rs267606947
NM_006623.4(PHGDH):c.901del (p.Val301fs) rs1571013274
NM_006623.4(PHGDH):c.945+1G>A rs758517215
NM_006623.4(PHGDH):c.945+1G>T rs758517215
NM_006623.4(PHGDH):c.946-2A>G rs1217925678

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