ClinVar Miner

List of variants in gene LHX3 studied for combined pituitary hormone deficiencies, genetic form

Included ClinVar conditions (28):
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Gene type:
ClinVar version:
Total variants: 109
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HGVS dbSNP gnomAD frequency
NM_178138.6(LHX3):c.79+2007T>C rs2274115 0.71807
NM_178138.6(LHX3):c.776-90C>T rs7860634 0.55589
NM_178138.6(LHX3):c.79+1975G>A rs2274116 0.23265
NM_178138.6(LHX3):c.454+64C>T rs2274114 0.21362
NM_178138.6(LHX3):c.251+30G>A rs75290716 0.05544
NM_178138.6(LHX3):c.454+3C>T rs34356735 0.01349
NM_178138.6(LHX3):c.108G>A (p.Gln36=) rs33998096 0.01071
NM_178138.6(LHX3):c.*780C>T rs4842130 0.01058
NM_178138.6(LHX3):c.*747C>G rs146752425 0.00714
NM_178138.6(LHX3):c.*825C>A rs3739470 0.00510
NM_178138.6(LHX3):c.*637T>C rs191713062 0.00280
NM_178138.6(LHX3):c.*185T>A rs144976921 0.00202
NM_178138.6(LHX3):c.*773G>A rs148781569 0.00191
NM_178138.6(LHX3):c.79+1829G>A rs551389075 0.00185
NM_178138.6(LHX3):c.252-4G>T rs372058376 0.00165
NM_178138.6(LHX3):c.*791G>A rs12237402 0.00091
NM_178138.6(LHX3):c.79+1902C>T rs375579333 0.00087
NM_178138.6(LHX3):c.705C>G (p.Arg235=) rs138595537 0.00073
NM_178138.6(LHX3):c.920G>C (p.Arg307Pro) rs182345541 0.00073
NM_178138.6(LHX3):c.929G>C (p.Arg310Pro) rs201591640 0.00070
NM_178138.6(LHX3):c.*790C>T rs572411652 0.00068
NM_178138.6(LHX3):c.964G>A (p.Ala322Thr) rs201356862 0.00035
NM_178138.6(LHX3):c.441C>T (p.Thr147=) rs200521449 0.00024
NM_178138.6(LHX3):c.*309C>T rs1040969252 0.00020
NM_178138.6(LHX3):c.*582G>A rs879304888 0.00019
NM_178138.6(LHX3):c.*9C>T rs369623778 0.00018
NM_178138.6(LHX3):c.534C>T (p.Thr178=) rs564712080 0.00018
NM_178138.6(LHX3):c.79+1935C>G rs769912904 0.00016
NM_178138.6(LHX3):c.*437G>A rs1013764402 0.00014
NM_178138.6(LHX3):c.*456G>A rs150382420 0.00013
NM_178138.6(LHX3):c.*638G>T rs374699388 0.00012
NM_178138.6(LHX3):c.860C>T (p.Ser287Leu) rs748322395 0.00012
NM_178138.6(LHX3):c.198C>G (p.Ala66=) rs190916587 0.00010
NM_178138.6(LHX3):c.739G>A (p.Glu247Lys) rs767763626 0.00009
NM_178138.6(LHX3):c.*55G>A rs543364659 0.00008
NM_178138.6(LHX3):c.281A>T (p.Gln94Leu) rs758634719 0.00008
NM_178138.6(LHX3):c.309G>T (p.Val103=) rs766945737 0.00008
NM_178138.6(LHX3):c.776-15C>A rs376405589 0.00007
NM_178138.6(LHX3):c.251+9C>T rs569254423 0.00006
NM_178138.6(LHX3):c.79+1904C>T rs1021046718 0.00006
NM_178138.6(LHX3):c.87G>A (p.Pro29=) rs183980824 0.00006
NM_178138.6(LHX3):c.919C>A (p.Arg307=) rs145867977 0.00006
NM_178138.6(LHX3):c.94G>A (p.Ala32Thr) rs201187873 0.00006
NM_178138.6(LHX3):c.*161C>A rs886063701 0.00005
NM_178138.6(LHX3):c.*357G>A rs886063700 0.00004
NM_178138.6(LHX3):c.*517C>T rs369945393 0.00004
NM_178138.6(LHX3):c.*554C>T rs886063697 0.00004
NM_178138.6(LHX3):c.1155C>T (p.Pro385=) rs377653669 0.00004
NM_178138.6(LHX3):c.79+1862A>G rs886063705 0.00004
NM_178138.6(LHX3):c.79+1888G>A rs1188545118 0.00004
NM_178138.6(LHX3):c.93C>T (p.Cys31=) rs558712702 0.00004
NM_178138.6(LHX3):c.966C>T (p.Ala322=) rs551180434 0.00004
NM_178138.6(LHX3):c.*32G>A rs771392788 0.00003
NM_178138.6(LHX3):c.*857C>T rs886063696 0.00003
NM_178138.6(LHX3):c.413G>T (p.Arg138Leu) rs374047783 0.00003
NM_178138.6(LHX3):c.555C>A (p.His185Gln) rs760626241 0.00003
NM_178138.6(LHX3):c.79+1814G>T rs569646536 0.00003
NM_178138.6(LHX3):c.804G>C (p.Pro268=) rs771201500 0.00003
NM_178138.6(LHX3):c.993G>A (p.Gln331=) rs752480970 0.00003
NM_178138.6(LHX3):c.79+1967C>A rs759584117 0.00002
NM_178138.6(LHX3):c.*1031A>G rs569655668 0.00001
NM_178138.6(LHX3):c.*140G>A rs1181863841 0.00001
NM_178138.6(LHX3):c.*237G>A rs1252042714 0.00001
NM_178138.6(LHX3):c.*403T>C rs919677270 0.00001
NM_178138.6(LHX3):c.1024A>G (p.Thr342Ala) rs1260618703 0.00001
NM_178138.6(LHX3):c.1092C>A (p.Asn364Lys) rs886063702 0.00001
NM_178138.6(LHX3):c.145C>T (p.Arg49Cys) rs781049722 0.00001
NM_178138.6(LHX3):c.79+1933G>C rs1391957672 0.00001
NM_178138.6(LHX3):c.80-10G>A rs555766551 0.00001
NM_178138.6(LHX3):c.812G>A (p.Gly271Asp) rs758724505 0.00001
NC_000009.12:g.(?_136197325)_(136205012_?)del
NM_178138.6(LHX3):c.*1063C>T rs1564280053
NM_178138.6(LHX3):c.*31C>G rs776792156
NM_178138.6(LHX3):c.*409G>T rs886063699
NM_178138.6(LHX3):c.*501A>T rs886063698
NM_178138.6(LHX3):c.*518G>A rs545939943
NM_178138.6(LHX3):c.*570C>A rs1588623321
NM_178138.6(LHX3):c.*692C>T rs1831495899
NM_178138.6(LHX3):c.*715C>A rs1831495471
NM_178138.6(LHX3):c.*719C>T rs1831495385
NM_178138.6(LHX3):c.*956C>T rs886063695
NM_178138.6(LHX3):c.1003T>C (p.Ser335Pro)
NM_178138.6(LHX3):c.1092C>T (p.Asn364=) rs886063702
NM_178138.6(LHX3):c.112A>G (p.Ile38Val) rs1341469393
NM_178138.6(LHX3):c.133A>T (p.Lys45Ter) rs137854506
NM_178138.6(LHX3):c.214C>T (p.Arg72Ter) rs774533927
NM_178138.6(LHX3):c.251+148T>C rs1886296
NM_178138.6(LHX3):c.280C>T (p.Gln94Ter) rs2131034777
NM_178138.6(LHX3):c.287_288delinsTCCT (p.Gly96fs) rs137854504
NM_178138.6(LHX3):c.332A>G (p.Tyr111Cys) rs104894117
NM_178138.6(LHX3):c.354C>A (p.Cys118Ter)
NM_178138.6(LHX3):c.452_454+20del rs587776711
NM_178138.6(LHX3):c.581C>G (p.Thr194Arg) rs2131032901
NM_178138.6(LHX3):c.582G>C (p.Thr194=) rs759590430
NM_178138.6(LHX3):c.597C>T (p.Arg199=) rs369145566
NM_178138.6(LHX3):c.607-3_630del rs969810391
NM_178138.6(LHX3):c.622C>T (p.Arg208Cys) rs1280467564
NM_178138.6(LHX3):c.629C>T (p.Ala210Val) rs137854503
NM_178138.6(LHX3):c.672G>A (p.Trp224Ter) rs137854505
NM_178138.6(LHX3):c.737A>G (p.Gln246Arg) rs886063704
NM_178138.6(LHX3):c.79+1813G>C rs886063706
NM_178138.6(LHX3):c.79+1927G>A rs1831682631
NM_178138.6(LHX3):c.80-2A>G rs2131036410
NM_178138.6(LHX3):c.80-530_776-454del
NM_178138.6(LHX3):c.804G>A (p.Pro268=) rs771201500
NM_178138.6(LHX3):c.819C>T (p.Tyr273=) rs373923718
NM_178138.6(LHX3):c.915G>A (p.Gln305=) rs548140963
NM_178138.6(LHX3):c.93_95dup (p.Ala32dup) rs2131036367
NM_178138.6(LHX3):c.96del (p.Gly33fs) rs587776712

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