ClinVar Miner

List of variants reported as pathogenic for combined pituitary hormone deficiencies, genetic form by OMIM

Included ClinVar conditions (28):
Minimum submission review status: Collection method:
Minimum conflict level:
ClinVar version:
Total variants: 107
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HGVS dbSNP gnomAD frequency
NM_000823.4(GHRHR):c.214G>T (p.Glu72Ter) rs121918117 0.00018
NM_006261.5(PROP1):c.349T>A (p.Phe117Ile) rs121917840 0.00010
NM_003865.3(HESX1):c.541A>G (p.Thr181Ala) rs28936704 0.00008
NM_000823.4(GHRHR):c.57+1G>A rs2302022 0.00007
NM_006261.5(PROP1):c.150del (p.Arg53fs) rs587776683 0.00006
NM_005149.3(TBX19):c.856C>T (p.Arg286Ter) rs74315376 0.00005
NM_006261.5(PROP1):c.358C>T (p.Arg120Cys) rs121917839 0.00005
NM_000306.4(POU1F1):c.472G>C (p.Ala158Pro) rs104893756 0.00003
NM_000823.4(GHRHR):c.431T>A (p.Leu144His) rs121918118 0.00003
NM_003865.3(HESX1):c.445G>A (p.Glu149Lys) rs104893742 0.00003
NM_006261.5(PROP1):c.217C>T (p.Arg73Cys) rs121917843 0.00003
NM_006261.5(PROP1):c.295C>T (p.Arg99Ter) rs121917844 0.00003
NM_017619.4(RNPC3):c.1420C>A (p.Pro474Thr) rs370930012 0.00003
NM_017619.4(RNPC3):c.259C>T (p.Gln87Ter) rs1332137733 0.00003
NM_021728.4(OTX2):c.698A>G (p.Asn233Ser) rs370761964 0.00003
NM_000823.4(GHRHR):c.985A>G (p.Lys329Glu) rs121918121 0.00002
NM_006261.5(PROP1):c.296G>A (p.Arg99Gln) rs137853100 0.00002
NC_000007.14:g.30963945A>C rs2128596101 0.00001
NM_000306.4(POU1F1):c.688G>A (p.Glu230Lys) rs104893764 0.00001
NM_000515.5(GH1):c.626G>A (p.Arg209His) rs137853223 0.00001
NM_000823.4(GHRHR):c.725T>G (p.Phe242Cys) rs121918119 0.00001
NM_003865.3(HESX1):c.18G>C (p.Gln6His) rs121909173 0.00001
NM_003865.3(HESX1):c.357+2T>C rs575112817 0.00001
NM_003865.3(HESX1):c.478C>T (p.Arg160Cys) rs28936702 0.00001
NM_006261.5(PROP1):c.218G>A (p.Arg73His) rs121917842 0.00001
NM_017619.4(RNPC3):c.1504C>T (p.Arg502Ter) rs918108896 0.00001
NM_033343.4(LHX4):c.250C>T (p.Arg84Cys) rs121912642 0.00001
GH1, 6.7-KB DEL
K146R
NC_000009.12:g.(?_136197325)_(136205012_?)del
NM_000061.3(BTK):c.1125T>G (p.Tyr375Ter) rs128621197
NM_000061.3(BTK):c.1625T>C (p.Leu542Pro) rs128621203
NM_000061.3(BTK):c.1750+5G>A rs864321659
NM_000306.4(POU1F1):c.143-64T>G rs1064796954
NM_000306.4(POU1F1):c.143-66T>G rs2106940833
NM_000306.4(POU1F1):c.143-68T>A rs2106940845
NM_000306.4(POU1F1):c.143-69T>G rs2106940848
NM_000306.4(POU1F1):c.143-71T>G rs2106940851
NM_000306.4(POU1F1):c.143-73T>G rs2106940853
NM_000306.4(POU1F1):c.404T>G (p.Phe135Cys) rs104893761
NM_000306.4(POU1F1):c.428G>A (p.Arg143Gln) rs104893759
NM_000306.4(POU1F1):c.433A>T (p.Lys145Ter) rs104893763
NM_000306.4(POU1F1):c.514C>T (p.Arg172Ter) rs104893754
NM_000306.4(POU1F1):c.515G>A (p.Arg172Gln) rs104893765
NM_000306.4(POU1F1):c.537C>G (p.Ser179Arg) rs104893766
NM_000306.4(POU1F1):c.577T>C (p.Trp193Arg) rs104893758
NM_000306.4(POU1F1):c.715C>T (p.Pro239Ser) rs104893762
NM_000306.4(POU1F1):c.71C>T (p.Pro24Leu) rs104893757
NM_000306.4(POU1F1):c.747del (p.Glu250fs) rs587776798
NM_000306.4(POU1F1):c.748G>T (p.Glu250Ter) rs104893760
NM_000306.4(POU1F1):c.775dup (p.Arg259fs) rs587776799
NM_000306.4(POU1F1):c.811C>T (p.Arg271Trp) rs104893755
NM_000515.5(GH1):c.172-2A>T rs863223309
NM_000515.5(GH1):c.172G>A (p.Glu58Lys) rs2144739391
NM_000515.5(GH1):c.173A>C (p.Glu58Ala) rs2144739380
NM_000515.5(GH1):c.176A>G (p.Glu59Gly) rs2144739370
NM_000515.5(GH1):c.236G>C (p.Cys79Ser) rs137853222
NM_000515.5(GH1):c.245_246del (p.Glu82fs) rs1907472729
NM_000515.5(GH1):c.291+1G>A rs71640277
NM_000515.5(GH1):c.291+1G>C rs71640277
NM_000515.5(GH1):c.291+28G>A rs863223306
NM_000515.5(GH1):c.291+29_291+46del rs2144738731
NM_000515.5(GH1):c.291+2T>C rs863223310
NM_000515.5(GH1):c.291+5G>A rs863223307
NM_000515.5(GH1):c.291+6T>C rs797044450
NM_000515.5(GH1):c.292-37_292-16del rs2509250570
NM_000515.5(GH1):c.307C>T (p.Arg103Cys) rs137853220
NM_000515.5(GH1):c.413A>G (p.Asp138Gly) rs137853221
NM_000515.5(GH1):c.456+1G>C rs797044449
NM_000515.5(GH1):c.456+1G>T rs797044449
NM_000515.5(GH1):c.456+5G>C rs863223308
NM_000515.5(GH1):c.52del (p.Leu18fs) rs2509253023
NM_000515.5(GH1):c.59G>A (p.Trp20Ter) rs137853219
NM_000823.4(GHRHR):c.665C>A (p.Ala222Glu) rs121918120
NM_002941.4(ROBO1):c.1690C>T (p.Pro564Ser) rs1229827011
NM_002941.4(ROBO1):c.719G>C (p.Cys240Ser) rs2081940708
NM_003865.3(HESX1):c.305_306dup (p.Leu103fs) rs748460226
NM_003865.3(HESX1):c.450_451del (p.Asp150fs) rs587776664
NM_003865.3(HESX1):c.525del (p.Asn178fs) rs2471733263
NM_003865.3(HESX1):c.77T>C (p.Ile26Thr) rs28936416
NM_005149.3(TBX19):c.257T>G (p.Met86Arg) rs74315378
NM_005149.3(TBX19):c.383C>T (p.Ser128Phe) rs74315377
NM_005149.3(TBX19):c.782del (p.Asn261fs) rs730880274
NM_005634.3(SOX3):c.711_731dup (p.Ala248_Ser249insAlaAlaAlaAlaAlaAlaAla) rs776775669
NM_006261.5(PROP1):c.112_124del (p.Ser38fs) rs587776682
NM_006261.5(PROP1):c.150_151del (p.Gly52fs) rs587776681
NM_006261.5(PROP1):c.263T>C (p.Phe88Ser) rs121917841
NM_006261.5(PROP1):c.301_302del (p.Leu102fs) rs193922688
NM_006261.5(PROP1):c.582G>A (p.Trp194Ter) rs121917845
NM_017619.4(RNPC3):c.1228T>G (p.Phe410Val) rs2101050974
NM_017619.4(RNPC3):c.261dup (p.Leu88fs) rs2101044148
NM_017619.4(RNPC3):c.443G>C (p.Gly148Ala) rs2101044774
NM_017619.4(RNPC3):c.613C>T (p.Arg205Ter) rs939646611
NM_033343.4(LHX4):c.1162C>A (p.Pro388Thr) rs121912644
NM_033343.4(LHX4):c.293dup (p.Thr99fs) rs587776662
NM_033343.4(LHX4):c.569T>G (p.Leu190Arg) rs121912643
NM_033343.4(LHX4):c.607-1G>C rs748268631
NM_033343.4(LHX4):c.628G>C (p.Ala210Pro) rs121912641
NM_178138.6(LHX3):c.133A>T (p.Lys45Ter) rs137854506
NM_178138.6(LHX3):c.287_288delinsTCCT (p.Gly96fs) rs137854504
NM_178138.6(LHX3):c.332A>G (p.Tyr111Cys) rs104894117
NM_178138.6(LHX3):c.452_454+20del rs587776711
NM_178138.6(LHX3):c.629C>T (p.Ala210Val) rs137854503
NM_178138.6(LHX3):c.672G>A (p.Trp224Ter) rs137854505
NM_178138.6(LHX3):c.80-530_776-454del
NM_178138.6(LHX3):c.96del (p.Gly33fs) rs587776712
SOX3, DUP

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