ClinVar Miner

List of variants reported as likely benign for inborn disorder of glycosphingolipid and glycosylphosphatidylinositol anchor glycosylation by Illumina Laboratory Services, Illumina

Included ClinVar conditions (23):
Minimum submission review status: Collection method:
Minimum conflict level:
ClinVar version:
Total variants: 16
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HGVS dbSNP gnomAD frequency
NM_017837.3(PIGV):c.-370G>A rs71636780 0.05676
NM_032634.4(PIGO):c.*267C>G rs79276933 0.03143
NM_004278.4(PIGL):c.*254T>C rs144070256 0.00867
NM_032634.4(PIGO):c.1473G>C (p.Leu491=) rs76932500 0.00557
NM_032634.4(PIGO):c.2040G>C (p.Leu680=) rs41274877 0.00511
NM_004278.4(PIGL):c.424C>A (p.Leu142Met) rs115958467 0.00486
NM_003896.4(ST3GAL5):c.648C>T (p.Phe216=) rs149309844 0.00369
NM_032634.4(PIGO):c.2268G>A (p.Ala756=) rs149171782 0.00310
NM_032634.4(PIGO):c.-94C>A rs533921038 0.00295
NM_032634.4(PIGO):c.461C>A (p.Ala154Asp) rs142562923 0.00277
NM_003896.4(ST3GAL5):c.1036G>A (p.Val346Ile) rs145738225 0.00025
NM_017837.4(PIGV):c.473G>A (p.Ser158Asn) rs201332799 0.00014
NM_003896.4(ST3GAL5):c.*115C>T rs193077813 0.00007
NM_003896.4(ST3GAL5):c.84A>C (p.Ala28=) rs530496667 0.00001
NM_032634.4(PIGO):c.-213C>G rs547807832 0.00001
NM_032634.4(PIGO):c.714C>T (p.Gly238=) rs148186264

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