ClinVar Miner

List of variants reported as likely benign for Noonan syndrome by Fulgent Genetics, Fulgent Genetics

Included ClinVar conditions (47):
Minimum submission review status: Collection method:
Minimum conflict level:
ClinVar version:
Total variants: 81
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HGVS dbSNP gnomAD frequency
NM_006939.4(SOS2):c.3489+19C>T rs149825446 0.00700
NM_005633.4(SOS1):c.345+15C>T rs75937422 0.00374
NM_005633.4(SOS1):c.2997T>C (p.Asn999=) rs145364368 0.00366
NM_004333.6(BRAF):c.1141-19C>T rs71645959 0.00360
NM_005633.4(SOS1):c.2673+14T>C rs183998234 0.00249
NM_005633.4(SOS1):c.570C>T (p.Asp190=) rs55980502 0.00233
NM_005633.4(SOS1):c.3081+13A>G rs189695571 0.00209
NM_005633.4(SOS1):c.3032A>G (p.Asn1011Ser) rs8192671 0.00164
NM_033360.4(KRAS):c.5-18A>G rs200189105 0.00100
NM_002834.5(PTPN11):c.526-17T>C rs375184329 0.00096
NM_005633.4(SOS1):c.2238T>C (p.Asn746=) rs75877625 0.00084
NM_005633.4(SOS1):c.73C>T (p.Pro25Ser) rs139592595 0.00080
NM_004333.6(BRAF):c.981-20C>T rs374896031 0.00066
NM_002834.5(PTPN11):c.1658C>T (p.Thr553Met) rs148176616 0.00048
NM_002834.5(PTPN11):c.1379+20C>T rs184743462 0.00047
NM_004333.6(BRAF):c.2127+3A>G rs371976102 0.00043
NM_006939.4(SOS2):c.1521G>T (p.Glu507Asp) rs141604342 0.00041
NM_002834.5(PTPN11):c.643-6dup rs758889732 0.00030
NM_004985.5(KRAS):c.24A>G (p.Val8=) rs147406419 0.00025
NM_002755.4(MAP2K1):c.237C>T (p.Gly79=) rs148656020 0.00024
NM_004333.6(BRAF):c.240+18A>G rs368584855 0.00017
NM_004333.6(BRAF):c.1860+16A>G rs368859030 0.00015
NM_002834.5(PTPN11):c.1746C>T (p.Asn582=) rs397516800 0.00013
NM_033360.4(KRAS):c.90C>T (p.Asp30=) rs113623140 0.00013
NM_002834.5(PTPN11):c.1224+15G>A rs373271861 0.00012
NM_002834.5(PTPN11):c.558G>T (p.Arg186=) rs200920312 0.00011
NM_005633.4(SOS1):c.3357C>T (p.Thr1119=) rs373319212 0.00011
NM_006939.4(SOS2):c.1263T>C (p.Asn421=) rs369267864 0.00011
NM_004333.6(BRAF):c.1993-11T>C rs750297886 0.00009
NM_004333.6(BRAF):c.399A>G (p.Ser133=) rs397507463 0.00009
NM_006939.4(SOS2):c.2120A>G (p.Glu707Gly) rs369462490 0.00008
NM_004333.6(BRAF):c.1694+13C>T rs368578780 0.00007
NM_002834.5(PTPN11):c.392A>G (p.Lys131Arg) rs397516805 0.00006
NM_002834.5(PTPN11):c.616T>C (p.Leu206=) rs78376169 0.00006
NM_004333.6(BRAF):c.504+19C>T rs780617193 0.00006
NM_033360.4(KRAS):c.4+5G>A rs201789109 0.00006
NM_002834.5(PTPN11):c.14+11C>A rs1486505121 0.00004
NM_002880.4(RAF1):c.435G>A (p.Thr145=) rs371565419 0.00004
NM_004333.6(BRAF):c.1433-5T>C rs587780861 0.00004
NM_004333.6(BRAF):c.915G>A (p.Ala305=) rs145675911 0.00004
NM_004985.5(KRAS):c.451-5652C>T rs727505314 0.00004
NM_005633.4(SOS1):c.1490G>A (p.Arg497Gln) rs371314838 0.00004
NM_005633.4(SOS1):c.1905C>T (p.Cys635=) rs762900789 0.00004
NM_004333.6(BRAF):c.1314+17T>C rs1057524397 0.00003
NM_004333.6(BRAF):c.2128-10_2128-9insC rs758588300 0.00003
NM_004333.6(BRAF):c.2136C>T (p.Ala712=) rs377165711 0.00003
NM_002834.5(PTPN11):c.1551G>A (p.Ala517=) rs727504377 0.00002
NM_002834.5(PTPN11):c.327T>G (p.Ser109=) rs1039250039 0.00002
NM_002834.5(PTPN11):c.519C>G (p.Arg173=) rs767425313 0.00002
NM_002880.4(RAF1):c.1113T>C (p.Asp371=) rs146668293 0.00002
NM_004333.6(BRAF):c.1314+14A>G rs749502450 0.00002
NM_004333.6(BRAF):c.1433-18G>A rs763267814 0.00002
NM_005633.4(SOS1):c.984C>T (p.Gly328=) rs778223456 0.00002
NM_002755.4(MAP2K1):c.693+20T>C rs753107656 0.00001
NM_002834.5(PTPN11):c.1011G>A (p.Thr337=) rs371951288 0.00001
NM_002834.5(PTPN11):c.1047C>T (p.Asn349=) rs1222504763 0.00001
NM_002834.5(PTPN11):c.1131A>C (p.Leu377=) rs370059077 0.00001
NM_002834.5(PTPN11):c.1233G>A (p.Thr411=) rs1325353647 0.00001
NM_002834.5(PTPN11):c.1650G>A (p.Ala550=) rs374896287 0.00001
NM_002834.5(PTPN11):c.874C>T (p.Leu292=) rs930267460 0.00001
NM_004333.6(BRAF):c.1338G>A (p.Ser446=) rs765215499 0.00001
NM_004333.6(BRAF):c.1797A>G (p.Thr599=) rs1431556127 0.00001
NM_004333.6(BRAF):c.1848C>A (p.Ser616=) rs752115982 0.00001
NM_004333.6(BRAF):c.1992+15C>T rs766089848 0.00001
NM_004333.6(BRAF):c.298T>C (p.Leu100=) rs761709697 0.00001
NM_004333.6(BRAF):c.712-18T>C rs535496777 0.00001
NM_005633.4(SOS1):c.1848T>C (p.His616=) rs1344852617 0.00001
NM_005633.4(SOS1):c.2604T>C (p.Phe868=) rs756520305 0.00001
NM_002755.4(MAP2K1):c.291+14_291+20delinsTCTCACCAATCACCA rs1064795401
NM_002880.3(RAF1):c.-340_-339GA[1] rs527774250
NM_002880.4(RAF1):c.-204G>C rs547543588
NM_004333.6(BRAF):c.1206C>A (p.Pro402=) rs201758035
NM_004333.6(BRAF):c.1368G>A (p.Gln456=) rs767473452
NM_004333.6(BRAF):c.1432+17_1432+19del rs777363183
NM_004333.6(BRAF):c.1719C>A (p.Ile573=) rs2128999629
NM_004333.6(BRAF):c.1992+16G>C rs3789806
NM_004333.6(BRAF):c.2128-27_2128-19del rs761539834
NM_004985.5(KRAS):c.112-9C>T rs727504298
NM_005633.4(SOS1):c.2674-9dup rs532594344
NM_006767.4(LZTR1):c.1620T>C (p.His540=) rs141610191
NM_006939.4(SOS2):c.3540TCC[4] (p.Pro1183dup) rs765097073

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