List of variants reported as benign for amyloidosis by Illumina Laboratory Services, Illumina

Minimum submission review status:		Collection method:
Minimum conflict level: Report conflict between different conditions
Show significances as they were submitted (without aggregation into standard terms)
		ClinVar version:

Total variants: 92

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HGVS	dbSNP	gnomAD frequency
NM_000239.3(LYZ):c.*178C>T	rs710794	0.89111
NM_021871.3(FGA):c.-58A>G	rs2070011	0.65406
NM_000239.3(LYZ):c.*835C>T	rs1384	0.40016
NM_021871.4(FGA):c.991A>G (p.Thr331Ala)	rs6050	0.29256
NM_000239.3(LYZ):c.*655G>T	rs8612	0.10799
NM_198252.3(GSN):c.2115T>C (p.Phe705=)	rs9102	0.07073
NM_000239.3(LYZ):c.-1C>T	rs513342	0.06603
NM_198252.3(GSN):c.1694C>T (p.Thr565Met)	rs76463933	0.05893
NM_198252.3(GSN):c.1260C>T (p.Gly420=)	rs2304393	0.05790
NM_000371.4(TTR):c.76G>A (p.Gly26Ser)	rs1800458	0.05309
NM_000239.3(LYZ):c.263C>A (p.Thr88Asn)	rs1800973	0.04360
NM_198252.3(GSN):c.232G>A (p.Ala78Thr)	rs2230287	0.03231
NM_198252.3(GSN):c.1535C>G (p.Thr512Ser)	rs77681311	0.02987
NM_198252.3(GSN):c.29A>G (p.Lys10Arg)	rs115224458	0.02654
NM_000371.4(TTR):c.*21C>A	rs12226	0.02158
NM_198252.3(GSN):c.538A>G (p.Asn180Asp)	rs11550199	0.01287
NM_000371.3(TTR):c.*345G>A	rs58172837	0.01182
NM_198252.3(GSN):c.1239A>G (p.Thr413=)	rs149375418	0.00861
NM_000239.3(LYZ):c.*461G>A	rs531233279	0.00770
NM_198252.3(GSN):c.382G>A (p.Val128Met)	rs41305623	0.00507
NM_198252.3(GSN):c.196+7C>T	rs146379508	0.00444
NM_198252.3(GSN):c.1680C>T (p.Ser560=)	rs73660439	0.00379
NM_198252.3(GSN):c.664-4A>G	rs143590302	0.00376
NM_000039.3(APOA1):c.732C>G (p.Pro244=)	rs5080	0.00368
NM_198252.3(GSN):c.1850G>T (p.Arg617Leu)	rs9696578	0.00359
NM_198252.3(GSN):c.1288C>T (p.Arg430Cys)	rs116185403	0.00357
NM_000239.3(LYZ):c.10C>G (p.Leu4Val)	rs58131341	0.00302
NM_198252.3(GSN):c.243C>T (p.Thr81=)	rs116956127	0.00302
NM_021871.4(FGA):c.1366A>G (p.Thr456Ala)	rs2070031	0.00262
NM_021871.4(FGA):c.16A>G (p.Ile6Val)	rs2070025	0.00250
NM_021871.4(FGA):c.181-14C>T	rs190703077	0.00240
NM_021871.4(FGA):c.300G>A (p.Lys100=)	rs112877216	0.00240
NM_000239.3(LYZ):c.*890T>C	rs188271229	0.00204
NM_000239.3(LYZ):c.*418C>A	rs534565279	0.00177
NM_000371.4(TTR):c.416C>T (p.Thr139Met)	rs28933981	0.00177
NM_000239.3(LYZ):c.*415G>A	rs183441118	0.00159
NM_000239.3(LYZ):c.*413G>T	rs193040437	0.00128
NM_000371.4(TTR):c.360C>T (p.Ser120=)	rs150127220	0.00128
NM_000239.3(LYZ):c.*169G>A	rs568058282	0.00126
NM_198252.3(GSN):c.1225G>A (p.Val409Met)	rs140042418	0.00103
NM_000239.3(LYZ):c.*191A>G	rs183375295	0.00101
NM_000039.3(APOA1):c.181G>A (p.Ala61Thr)	rs12718465	0.00091
NM_198252.3(GSN):c.1663G>A (p.Val555Met)	rs151208452	0.00063
NM_000039.3(APOA1):c.562G>T (p.Ala188Ser)	rs140770089	0.00058
NM_198252.3(GSN):c.1555G>A (p.Ala519Thr)	rs147554026	0.00058
NM_198252.3(GSN):c.1931C>T (p.Thr644Met)	rs144434647	0.00057
NM_021871.4(FGA):c.1417G>A (p.Asp473Asn)	rs200378626	0.00048
NM_000039.3(APOA1):c.178T>G (p.Ser60Ala)	rs199759119	0.00043
NM_198252.3(GSN):c.271C>T (p.Arg91Trp)	rs146956976	0.00041
NM_198252.3(GSN):c.1513G>A (p.Gly505Arg)	rs58750568	0.00033
NM_021871.4(FGA):c.1199C>T (p.Ser400Phe)	rs184635235	0.00031
NM_021871.4(FGA):c.244A>C (p.Thr82Pro)	rs199554805	0.00031
NM_000039.3(APOA1):c.*19C>G	rs187335584	0.00029
NM_198252.3(GSN):c.2069G>A (p.Arg690Gln)	rs141510612	0.00029
NM_198252.3(GSN):c.1563C>T (p.Ser521=)	rs140414249	0.00026
NM_198252.3(GSN):c.1098G>A (p.Val366=)	rs201325199	0.00025
NM_198252.3(GSN):c.1487A>G (p.Tyr496Cys)	rs139832048	0.00025
NM_000371.3(TTR):c.*191C>T	rs556327750	0.00023
NM_198252.3(GSN):c.-9-1967C>T	rs372837702	0.00020
NM_000371.4(TTR):c.371G>A (p.Arg124His)	rs121918095	0.00019
NM_198252.3(GSN):c.1421G>A (p.Arg474His)	rs142828669	0.00019
NM_198252.3(GSN):c.1727C>G (p.Ala576Gly)	rs567372749	0.00016
NM_198252.3(GSN):c.754-11C>T	rs374057474	0.00016
NM_198252.3(GSN):c.1191+4C>T	rs372713895	0.00014
NM_198252.3(GSN):c.1170C>T (p.Asp390=)	rs147583697	0.00013
NM_198252.3(GSN):c.1782G>A (p.Leu594=)	rs139239940	0.00012
NM_198252.3(GSN):c.2046G>A (p.Thr682=)	rs747385746	0.00011
NM_021871.4(FGA):c.*50T>G	rs369606098	0.00010
NM_021871.4(FGA):c.1072G>A (p.Gly358Arg)	rs201105899	0.00007
NM_198252.3(GSN):c.547C>T (p.Arg183Trp)	rs371175865	0.00007
NM_000039.3(APOA1):c.9T>C (p.Ala3=)	rs141383703	0.00006
NM_198252.3(GSN):c.1191+14G>A	rs377308627	0.00006
NM_198252.3(GSN):c.1423G>T (p.Val475Leu)	rs766945413	0.00005
NM_021871.4(FGA):c.1838A>G (p.His613Arg)	rs201686865	0.00004
NM_000039.3(APOA1):c.28G>A (p.Val10Met)	rs750125257	0.00003
NM_021871.4(FGA):c.1718G>A (p.Arg573His)	rs78506343	0.00003
NM_198252.3(GSN):c.1443C>T (p.Pro481=)	rs200156774	0.00003
NM_000239.3(LYZ):c.151A>T (p.Lys51Ter)	rs367682582	0.00002
NM_021871.4(FGA):c.1918C>G (p.Pro640Ala)	rs199571440	0.00002
NM_021871.4(FGA):c.450G>A (p.Gln150=)	rs368446857	0.00002
NM_021871.4(FGA):c.904C>G (p.Pro302Ala)	rs200203992	0.00002
NM_021871.4(FGA):c.1912G>A (p.Gly638Arg)	rs771429165	0.00001
NM_198252.3(GSN):c.1009C>T (p.Leu337=)	rs528161256	0.00001
NM_198252.3(GSN):c.163G>A (p.Gly55Arg)	rs556563870	0.00001
NM_198252.3(GSN):c.1874T>C (p.Ile625Thr)	rs777767455	0.00001
NM_000239.3(LYZ):c.*266G>A	rs188313797
NM_000239.3(LYZ):c.*521G>A	rs567541896
NM_000239.3(LYZ):c.415G>C (p.Val139Leu)	rs367623154
NM_021871.4(FGA):c.*133G>A	rs182736373
NM_198252.3(GSN):c.*97GT[12]	rs147410423
NM_198252.3(GSN):c.1171G>A (p.Asp391Asn)	rs142034230
NM_198252.3(GSN):c.231C>A (p.Ala77=)	rs140734150

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