ClinVar Miner

List of variants studied for central nervous system malformation by Victorian Clinical Genetics Services, Murdoch Childrens Research Institute

Included ClinVar conditions (163):
Minimum submission review status: Collection method:
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ClinVar version:
Total variants: 65
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HGVS dbSNP gnomAD frequency
NM_207346.3(TSEN54):c.409A>C (p.Ile137Leu) rs11559205 0.09934
NM_016042.4(EXOSC3):c.395A>C (p.Asp132Ala) rs141138948 0.00048
NM_015631.6(TCTN3):c.283A>C (p.Thr95Pro) rs749447795 0.00024
NM_001378615.1(CC2D2A):c.4667A>T (p.Asp1556Val) rs201502401 0.00020
NM_020320.5(RARS2):c.754T>A (p.Tyr252Asn) rs140692271 0.00018
NM_016111.4(TELO2):c.1100G>T (p.Cys367Phe) rs202020308 0.00016
NM_020320.5(RARS2):c.1026G>A (p.Met342Ile) rs34647222 0.00014
NM_005559.4(LAMA1):c.485G>A (p.Arg162His) rs759415734 0.00011
NM_015631.6(TCTN3):c.1774C>G (p.Leu592Val) rs375708075 0.00007
NM_001044385.3(TMEM237):c.52C>T (p.Arg18Ter) rs199469707 0.00006
NM_016111.4(TELO2):c.392G>A (p.Gly131Asp) rs187225056 0.00006
NM_020320.5(RARS2):c.35A>G (p.Gln12Arg) rs147391618 0.00006
NM_001519.4(BRF1):c.1693G>T (p.Ala565Ser) rs188142316 0.00004
NM_015272.5(RPGRIP1L):c.3707G>A (p.Arg1236His) rs1410635948 0.00002
NM_033026.6(PCLO):c.6916A>G (p.Lys2306Glu) rs747750190 0.00002
NM_003611.3(OFD1):c.1030C>T (p.Arg344Ter) rs758903488 0.00001
NM_004958.4(MTOR):c.1081T>A (p.Cys361Ser) rs778914291 0.00001
NM_004958.4(MTOR):c.5431C>T (p.Arg1811Cys) rs1258909652 0.00001
NM_000435.3(NOTCH3):c.6405_6406del (p.Leu2137fs)
NM_001044385.3(TMEM237):c.1066dup (p.Gln356fs) rs751952525
NM_001080522.2(CC2D2A):c.3289delG rs386833751
NM_001134831.2(AHI1):c.1420del (p.Ile474fs) rs1369440486
NM_001134831.2(AHI1):c.1829G>C (p.Arg610Pro) rs374009466
NM_001134831.2(AHI1):c.2036+6T>G rs2128037867
NM_001134831.2(AHI1):c.2501C>T (p.Ala834Val) rs529407899
NM_001135146.2(SLC39A8):c.16_28del (p.Ala6fs)
NM_001367721.1(CASK):c.1665G>A (p.Met555Ile) rs2147155700
NM_001368809.2(AMPD2):c.1198C>T (p.Gln400Ter) rs1011286644
NM_001368809.2(AMPD2):c.2327del (p.Ile776fs) rs1651209606
NM_001378615.1(CC2D2A):c.2010G>C (p.Glu670Asp) rs763596840
NM_001378615.1(CC2D2A):c.2710G>T (p.Glu904Ter)
NM_001378615.1(CC2D2A):c.4256del (p.Gly1419fs) rs772110399
NM_001378615.1(CC2D2A):c.438+1G>T rs1453265480
NM_001378615.1(CC2D2A):c.4465_4468del (p.Asp1489fs) rs797045437
NM_001759.4(CCND2):c.559C>G (p.Leu187Val)
NM_001759.4(CCND2):c.808A>T (p.Lys270Ter) rs587777619
NM_002547.3(OPHN1):c.1202-1G>A rs2147456067
NM_004958.4(MTOR):c.1060T>A (p.Ser354Thr)
NM_004958.4(MTOR):c.1256A>G (p.His419Arg)
NM_004958.4(MTOR):c.1951G>C (p.Val651Leu)
NM_004958.4(MTOR):c.5062C>T (p.Pro1688Ser) rs2100477232
NM_004958.4(MTOR):c.5930C>A (p.Thr1977Lys) rs587777893
NM_004958.4(MTOR):c.7253T>C (p.Leu2418Pro)
NM_004958.4(MTOR):c.7534G>C (p.Asp2512His)
NM_005027.4(PIK3R2):c.1117G>A (p.Gly373Arg) rs587776934
NM_005465.7(AKT3):c.1393C>T (p.Arg465Trp) rs587776935
NM_005559.4(LAMA1):c.4024G>C (p.Val1342Leu) rs2144110328
NM_005559.4(LAMA1):c.6333dup (p.Gln2112fs)
NM_005559.4(LAMA1):c.7603G>A (p.Gly2535Ser)
NM_005559.4(LAMA1):c.9160T>C (p.Phe3054Leu)
NM_006218.4(PIK3CA):c.1132T>C (p.Cys378Arg) rs1724507777
NM_006218.4(PIK3CA):c.2137A>G (p.Ile713Val)
NM_006218.4(PIK3CA):c.263G>A (p.Arg88Gln) rs121913287
NM_014008.5(CCDC22):c.142G>A (p.Ala48Thr)
NM_014008.5(CCDC22):c.319C>T (p.Arg107Cys)
NM_014008.5(CCDC22):c.622G>A (p.Glu208Lys) rs2147938135
NM_014233.4(UBTF):c.628G>A (p.Glu210Lys) rs1555582065
NM_015272.5(RPGRIP1L):c.530-1G>C rs2151325787
NM_015631.6(TCTN3):c.322G>T (p.Asp108Tyr) rs2139767280
NM_016042.4(EXOSC3):c.2T>G (p.Met1Arg)
NM_016042.4(EXOSC3):c.703G>A (p.Gly235Arg)
NM_016464.5(TMEM138):c.274A>C (p.Ser92Arg) rs1858145836
NM_020320.5(RARS2):c.1511+3A>G rs886061821
NM_020320.5(RARS2):c.25A>G (p.Ile9Val)
NM_025114.4(CEP290):c.7282_7286dup (p.Tyr2429Ter) rs2136546576

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