List of variants reported as likely benign for malabsorption syndrome by Illumina Laboratory Services, Illumina

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Total variants: 33

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HGVS	dbSNP	gnomAD frequency
NM_001041.4(SI):c.4026A>G (p.Thr1342=)	rs74648160	0.10127
NM_002299.4(LCT):c.1650C>G (p.Gly550=)	rs35093754	0.05209
NM_001041.4(SI):c.4841+9A>G	rs114438312	0.01984
NM_001041.4(SI):c.4044G>A (p.Thr1348=)	rs75253993	0.01823
NM_002299.4(LCT):c.2714A>G (p.Asp905Gly)	rs115690016	0.01755
NM_001041.4(SI):c.483+4C>T	rs13086543	0.01717
NM_002299.4(LCT):c.454G>A (p.Ala152Thr)	rs114525655	0.01314
NM_001041.4(SI):c.598A>G (p.Ser200Gly)	rs113903766	0.01197
NM_080669.6(SLC46A1):c.*4316C>G	rs117397871	0.01065
NM_002299.4(LCT):c.*429A>C	rs77631953	0.01053
NM_080669.6(SLC46A1):c.*2123G>C	rs7225850	0.00854
NM_002299.4(LCT):c.4777G>A (p.Val1593Met)	rs35891837	0.00726
NM_001041.4(SI):c.2887A>C (p.Arg963=)	rs113456182	0.00560
NM_080669.6(SLC46A1):c.*3120A>G	rs147971222	0.00348
NM_080669.6(SLC46A1):c.*1648G>A	rs114008979	0.00295
NM_080669.6(SLC46A1):c.756C>G (p.Val252=)	rs185900287	0.00274
NM_080669.6(SLC46A1):c.*2852C>T	rs569526091	0.00243
NM_080669.6(SLC46A1):c.642G>A (p.Leu214=)	rs145398587	0.00145
NM_080669.6(SLC46A1):c.294C>A (p.Leu98=)	rs371270310	0.00110
NM_080669.6(SLC46A1):c.*1332G>A	rs146041886	0.00101
NM_001041.4(SI):c.4268-14T>C	rs201151548	0.00041
NM_080669.6(SLC46A1):c.*1392C>A	rs141940033	0.00011
NM_080669.6(SLC46A1):c.*60G>T	rs41297121	0.00006
NM_001041.4(SI):c.*314del	rs145227457
NM_001041.4(SI):c.2244+14G>A	rs114458546
NM_001041.4(SI):c.2737-23dup	rs11452619
NM_001041.4(SI):c.2737-9dup	rs747324303
NM_002299.4(LCT):c.*442GT[1]	rs140433552
NM_002299.4(LCT):c.318C>T (p.Asp106=)	rs34307240
NM_002299.4(LCT):c.5768C>A (p.Pro1923Gln)	rs114828879
NM_002299.4(LCT):c.729C>G (p.Val243=)	rs3816088
NM_080669.6(SLC46A1):c.*4035G>A	rs569679076
NM_080669.6(SLC46A1):c.906A>G (p.Lys302=)	rs572650603

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