List of variants reported as benign for X-linked recessive disease by Invitae

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		ClinVar version:

Total variants: 61

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HGVS	dbSNP	gnomAD frequency
NM_000240.4(MAOA):c.891G>T (p.Arg297=)	rs6323	0.71997
NM_000240.4(MAOA):c.1410T>C (p.Asp470=)	rs1137070	0.65298
NM_002351.4(SH2D1A):c.-346C>T	rs12164382	0.43694
NM_001167.4(XIAP):c.1268A>C (p.Gln423Pro)	rs5956583	0.38953
NM_000240.4(MAOA):c.385A>C (p.Arg129=)	rs1800464	0.17743
NM_000240.4(MAOA):c.306+16C>A	rs148788403	0.01100
NM_000240.4(MAOA):c.1374+19G>A	rs200078877	0.00388
NM_000240.4(MAOA):c.825G>A (p.Pro275=)	rs138703731	0.00238
NM_000240.4(MAOA):c.515G>A (p.Arg172Gln)	rs58524323	0.00220
NM_000240.4(MAOA):c.1165-13C>T	rs184965368	0.00173
NM_001167.4(XIAP):c.276T>C (p.Phe92=)	rs45575532	0.00080
NM_001167.4(XIAP):c.769C>G (p.Pro257Ala)	rs138783302	0.00068
NM_001167.4(XIAP):c.1408A>T (p.Thr470Ser)	rs143165174	0.00050
NM_001167.4(XIAP):c.309G>A (p.Thr103=)	rs140230812	0.00034
NM_002351.5(SH2D1A):c.346+3A>G	rs199706936	0.00031
NM_001167.4(XIAP):c.23G>A (p.Gly8Glu)	rs140889955	0.00024
NM_000240.4(MAOA):c.1559A>G (p.Lys520Arg)	rs1800466	0.00022
NM_001167.4(XIAP):c.455C>G (p.Thr152Ser)	rs150317928	0.00020
NM_001167.4(XIAP):c.1056+19A>T	rs769758486	0.00011
NM_001167.4(XIAP):c.1230G>A (p.Leu410=)	rs761489362	0.00010
NM_001167.4(XIAP):c.499T>C (p.Leu167=)	rs374298061	0.00009
NM_002351.5(SH2D1A):c.138-19G>A	rs370365609	0.00009
NM_001167.4(XIAP):c.1096A>G (p.Ile366Val)	rs766720607	0.00008
NM_001167.4(XIAP):c.146G>A (p.Arg49Gln)	rs770122195	0.00008
NM_001167.4(XIAP):c.962C>G (p.Ala321Gly)	rs182340753	0.00007
NM_001167.4(XIAP):c.1100-19T>G	rs28382736	0.00006
NM_001167.4(XIAP):c.1100A>G (p.Asp367Gly)	rs200273554	0.00006
NM_001167.4(XIAP):c.296A>G (p.Glu99Gly)	rs769904534	0.00006
NM_001167.4(XIAP):c.115G>T (p.Gly39Cys)	rs775237858	0.00005
NM_001167.4(XIAP):c.1194G>T (p.Gln398His)	rs776377233	0.00005
NM_001167.4(XIAP):c.1057-7G>A	rs753427928	0.00003
NM_001167.4(XIAP):c.1075A>G (p.Thr359Ala)	rs377097035	0.00003
NM_001167.4(XIAP):c.1196T>G (p.Ile399Arg)	rs753415949	0.00003
NM_001167.4(XIAP):c.1300+7A>G	rs749438405	0.00002
NM_000240.4(MAOA):c.816G>A (p.Ala272=)	rs751223564	0.00001
NM_001167.4(XIAP):c.1416A>G (p.Lys472=)	rs777650841	0.00001
NM_001167.4(XIAP):c.308C>T (p.Thr103Met)	rs749157868	0.00001
NM_001167.4(XIAP):c.915A>T (p.Gly305=)	rs755919911	0.00001
NM_002351.5(SH2D1A):c.144C>T (p.His48=)	rs765804146	0.00001
NM_002351.5(SH2D1A):c.7G>T (p.Ala3Ser)	rs148554414	0.00001
NM_000240.4(MAOA):c.1165-18T>G
NM_000240.4(MAOA):c.1263-16C>G
NM_000240.4(MAOA):c.168+11_168+15del	rs375984321
NM_001167.4(XIAP):c.1042C>T (p.Leu348Phe)
NM_001167.4(XIAP):c.1045GAG[1] (p.Glu350del)	rs199683465
NM_001167.4(XIAP):c.1056+13_1056+14del	rs1491462505
NM_001167.4(XIAP):c.1099+20A>G	rs751904914
NM_001167.4(XIAP):c.1100-8del
NM_001167.4(XIAP):c.1122T>C (p.Pro374=)
NM_001167.4(XIAP):c.1299A>G (p.Lys433=)
NM_001167.4(XIAP):c.134C>T (p.Ser45Leu)
NM_001167.4(XIAP):c.471C>T (p.Asn157=)
NM_001167.4(XIAP):c.532C>T (p.His178Tyr)
NM_001167.4(XIAP):c.807C>G (p.Ile269Met)
NM_001167.4(XIAP):c.878-5C>G	rs367801081
NM_001167.4(XIAP):c.878-5C>T	rs367801081
NM_002351.5(SH2D1A):c.201+20del
NM_002351.5(SH2D1A):c.347-32_347-28del	rs200198093
NM_002351.5(SH2D1A):c.48C>A (p.Gly16=)	rs72610640
NM_002351.5(SH2D1A):c.48C>T (p.Gly16=)	rs72610640
NM_002351.5(SH2D1A):c.84C>T (p.Ser28=)

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