ClinVar Miner

List of variants reported as benign for mixed neoplasm

Included ClinVar conditions (19):
Minimum submission review status: Collection method:
Minimum conflict level:
ClinVar version:
Total variants: 140
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HGVS dbSNP gnomAD frequency
NM_024426.6(WT1):c.*602A>G rs5030320 0.45163
NM_024426.6(WT1):c.*267G>C rs5030317 0.44381
NM_004484.4(GPC3):c.1292+9706A>G rs2205704 0.35691
NM_024426.6(WT1):c.1448-49T>C rs1799937 0.34839
NM_024426.6(WT1):c.213G>T (p.Pro71=) rs2234582 0.31689
NM_024426.6(WT1):c.887+16G>A rs1799933 0.26810
NM_000059.4(BRCA2):c.1114A>C (p.Asn372His) rs144848 0.23116
NM_024426.6(WT1):c.1122A>G (p.Arg374=) rs16754 0.16617
NC_000011.10:g.32438918G>A rs6508 0.16158
NM_024426.6(WT1):c.345C>T (p.Pro115=) rs1799925 0.15374
NM_024426.6(WT1):c.*88A>G rs5030315 0.14706
NM_024426.6(WT1):c.*224A>G rs5030316 0.13669
NM_024426.6(WT1):c.609C>T (p.Asn203=) rs2234583 0.13287
NM_024426.6(WT1):c.1265-32C>A rs2234593 0.12726
NM_004484.4(GPC3):c.1500T>C (p.Asp500=) rs2314298 0.06746
NM_004484.4(GPC3):c.1626A>G (p.Ala542=) rs61754631 0.05751
NM_024426.6(WT1):c.1074A>G (p.Gln358=) rs2234590 0.04693
NM_000059.4(BRCA2):c.2971A>G (p.Asn991Asp) rs1799944 0.04357
NM_000059.4(BRCA2):c.10234A>G (p.Ile3412Val) rs1801426 0.03864
NM_000059.4(BRCA2):c.2229T>C (p.His743=) rs1801499 0.03698
NM_000059.4(BRCA2):c.865A>C (p.Asn289His) rs766173 0.03693
NM_024426.6(WT1):c.*820G>C rs1042347 0.03223
NM_024426.6(WT1):c.*1132A>T rs5030328 0.02340
NM_024426.6(WT1):c.*835A>G rs5030322 0.02303
NM_024426.6(WT1):c.662-1928_662-1927del rs71873106 0.02282
NM_000059.4(BRCA2):c.8830A>T (p.Ile2944Phe) rs4987047 0.01281
NM_000059.4(BRCA2):c.8460A>C (p.Val2820=) rs9590940 0.01220
NM_004484.4(GPC3):c.204G>A (p.Lys68=) rs61754632 0.01163
NM_000059.4(BRCA2):c.7319A>G (p.His2440Arg) rs4986860 0.00984
NM_024426.6(WT1):c.*1209A>G rs5030329 0.00900
NM_000059.4(BRCA2):c.7469T>C (p.Ile2490Thr) rs11571707 0.00868
NM_024426.6(WT1):c.*1098C>T rs5030327 0.00867
NM_000059.4(BRCA2):c.7017G>C (p.Lys2339Asn) rs45574331 0.00792
NM_000059.4(BRCA2):c.9730G>A (p.Val3244Ile) rs11571831 0.00792
NM_000059.4(BRCA2):c.5418A>G (p.Glu1806=) rs34351119 0.00791
NM_024426.6(WT1):c.785-20G>T rs5030168 0.00663
NM_024426.6(WT1):c.1114-9T>C rs5030274 0.00465
NM_000059.4(BRCA2):c.7008-62A>G rs76584943 0.00439
NM_024426.6(WT1):c.*16G>T rs2234594 0.00421
NM_024426.6(WT1):c.*903G>A rs5030325 0.00370
NM_004484.4(GPC3):c.1285G>A (p.Val429Met) rs11539789 0.00333
NM_004484.4(GPC3):c.1167-8T>C rs182950534 0.00303
NM_024426.6(WT1):c.181C>A (p.Arg61=) rs2234581 0.00270
NM_000059.4(BRCA2):c.3516G>A (p.Ser1172=) rs1799952 0.00228
NM_024426.6(WT1):c.309C>A (p.Gly103=) rs547333427 0.00197
NM_000059.4(BRCA2):c.231T>G (p.Thr77=) rs114446594 0.00191
NM_024426.6(WT1):c.123G>C (p.Pro41=) rs555140661 0.00188
NM_004484.4(GPC3):c.826G>A (p.Gly276Ser) rs141100113 0.00082
NM_004484.4(GPC3):c.1032+9C>T rs200782847 0.00069
NM_004484.4(GPC3):c.995A>G (p.Gln332Arg) rs78696048 0.00065
NM_004484.4(GPC3):c.359G>A (p.Arg120His) rs148021273 0.00052
NM_024426.6(WT1):c.1161A>G (p.Ala387=) rs141834493 0.00051
NM_004484.4(GPC3):c.660C>T (p.Ser220=) rs138450923 0.00050
NM_024426.6(WT1):c.1131T>C (p.Pro377=) rs151034312 0.00047
NM_024426.6(WT1):c.375C>T (p.Gly125=) rs776209354 0.00039
NM_024426.6(WT1):c.216G>T (p.Gln72His) rs5030135 0.00036
NM_004484.4(GPC3):c.1254C>T (p.Asn418=) rs150766741 0.00032
NM_024426.6(WT1):c.1182C>T (p.Arg394=) rs147939483 0.00027
NM_004484.4(GPC3):c.876T>C (p.Ile292=) rs61754633 0.00024
NM_000059.4(BRCA2):c.5070A>C (p.Lys1690Asn) rs56087561 0.00023
NM_024426.6(WT1):c.760C>T (p.Pro254Ser) rs2234584 0.00022
NM_004484.4(GPC3):c.889A>G (p.Arg297Gly) rs148951753 0.00019
NM_024426.6(WT1):c.193G>A (p.Gly65Arg) rs374404615 0.00019
NM_004484.4(GPC3):c.172C>T (p.Pro58Ser) rs147231796 0.00014
NM_004484.4(GPC3):c.676A>G (p.Thr226Ala) rs145141525 0.00014
NM_004484.4(GPC3):c.1033-18T>C rs368015595 0.00013
NM_004484.4(GPC3):c.1631C>T (p.Pro544Leu) rs375606908 0.00011
NM_004484.4(GPC3):c.1232G>T (p.Ser411Ile) rs139206747 0.00010
NM_024426.6(WT1):c.381C>G (p.Pro127=) rs771681406 0.00009
NM_000059.4(BRCA2):c.9501+3A>T rs61757642 0.00008
NM_004484.4(GPC3):c.1680C>T (p.Ser560=) rs748480657 0.00008
NM_004484.4(GPC3):c.1716G>C (p.Val572=) rs779688123 0.00008
NM_024426.6(WT1):c.887+14G>A rs757237600 0.00008
NM_004484.4(GPC3):c.1149C>T (p.Thr383=) rs147245792 0.00007
NM_024426.6(WT1):c.1017-9T>C rs368486676 0.00007
NM_004484.4(GPC3):c.1287G>A (p.Val429=) rs756598026 0.00006
NM_004484.4(GPC3):c.358C>T (p.Arg120Cys) rs587778392 0.00006
NM_004484.4(GPC3):c.825C>T (p.Gly275=) rs753811089 0.00006
NM_024426.6(WT1):c.696C>T (p.Ser232=) rs9332974 0.00006
NM_024426.6(WT1):c.785G>A (p.Gly262Asp) rs372225738 0.00006
NM_004484.4(GPC3):c.168C>G (p.Pro56=) rs188592483 0.00005
NM_004484.4(GPC3):c.459T>G (p.Ser153=) rs775459305 0.00005
NM_004484.4(GPC3):c.1160G>A (p.Arg387Gln) rs145280221 0.00004
NM_004484.4(GPC3):c.1632G>A (p.Pro544=) rs766482434 0.00004
NM_004484.4(GPC3):c.394A>G (p.Asn132Asp) rs143561452 0.00004
NM_004484.4(GPC3):c.648G>C (p.Met216Ile) rs752516966 0.00004
NM_004484.4(GPC3):c.972T>C (p.Phe324=) rs183678432 0.00004
NM_024426.6(WT1):c.513C>A (p.Gly171=) rs536728682 0.00004
NM_024426.6(WT1):c.965+14T>C rs369920807 0.00004
NM_004484.4(GPC3):c.1398G>A (p.Leu466=) rs745968470 0.00003
NM_004484.4(GPC3):c.1426A>G (p.Met476Val) rs200265913 0.00003
NM_004484.4(GPC3):c.1573+20C>T rs368998078 0.00003
NM_004484.4(GPC3):c.1616G>C (p.Ser539Thr) rs137858712 0.00003
NM_004484.4(GPC3):c.175+9G>A rs776234359 0.00003
NM_004484.4(GPC3):c.365C>T (p.Ala122Val) rs779679730 0.00003
NM_004484.4(GPC3):c.1002C>T (p.Val334=) rs747775536 0.00002
NM_004484.4(GPC3):c.1068A>G (p.Gln356=) rs372212269 0.00002
NM_004484.4(GPC3):c.1131T>C (p.His377=) rs367679653 0.00002
NM_004484.4(GPC3):c.1332G>A (p.Gln444=) rs771847990 0.00002
NM_004484.4(GPC3):c.485A>G (p.Asn162Ser) rs780431445 0.00002
NM_004484.4(GPC3):c.693G>A (p.Gln231=) rs768782219 0.00002
NM_004484.4(GPC3):c.897C>T (p.Tyr299=) rs200421668 0.00002
NM_004484.4(GPC3):c.1063C>T (p.Arg355Cys) rs745700691 0.00001
NM_004484.4(GPC3):c.1162A>G (p.Arg388Gly) rs199812705 0.00001
NM_004484.4(GPC3):c.1248G>A (p.Ala416=) rs201677091 0.00001
NM_004484.4(GPC3):c.1275A>G (p.Gly425=) rs749258552 0.00001
NM_004484.4(GPC3):c.1318G>A (p.Gly440Arg) rs1203009272 0.00001
NM_004484.4(GPC3):c.1641C>T (p.Asn547=) rs772217919 0.00001
NM_004484.4(GPC3):c.1683G>A (p.Pro561=) rs1302862383 0.00001
NM_004484.4(GPC3):c.171G>A (p.Val57=) rs398124166 0.00001
NM_004484.4(GPC3):c.327G>A (p.Ala109=) rs1466168469 0.00001
NM_004484.4(GPC3):c.384C>T (p.Ala128=) rs761541528 0.00001
NM_004484.4(GPC3):c.392A>G (p.Lys131Arg) rs751302717 0.00001
NM_004484.4(GPC3):c.584A>G (p.Asn195Ser) rs745317547 0.00001
NM_004484.4(GPC3):c.844A>G (p.Met282Val) rs151082475 0.00001
NM_004484.4(GPC3):c.924T>A (p.Asn308Lys) rs368928269 0.00001
NM_001448.3(GPC4):c.320-15del rs57898529
NM_004484.4(GPC3):c.1029C>T (p.Thr343=) rs890143711
NM_004484.4(GPC3):c.1167-3del rs2124430989
NM_004484.4(GPC3):c.1236T>C (p.His412=)
NM_004484.4(GPC3):c.1574-11T>C
NM_004484.4(GPC3):c.1574-7_1574-4del rs751413609
NM_004484.4(GPC3):c.251C>T (p.Thr84Ile) rs2076400566
NM_004484.4(GPC3):c.326C>T (p.Ala109Val) rs761660909
NM_004484.4(GPC3):c.338-20dup rs370737647
NM_004484.4(GPC3):c.338-5del rs370737647
NM_004484.4(GPC3):c.79CCG[6] (p.Pro31dup) rs749104500
NM_024426.6(WT1):c.*1049del rs568803808
NM_024426.6(WT1):c.*1239T>A rs534396876
NM_024426.6(WT1):c.*345G>A rs5030318
NM_024426.6(WT1):c.*864T>A rs5030323
NM_024426.6(WT1):c.*864T>G rs5030323
NM_024426.6(WT1):c.*978dup rs5030326
NM_024426.6(WT1):c.1017-12T>G
NM_024426.6(WT1):c.1017-20dup
NM_024426.6(WT1):c.1122A>C (p.Arg374=) rs16754
NM_024426.6(WT1):c.1448-10G>A rs185744719
NM_024426.6(WT1):c.543C>T (p.Arg181=) rs369870529
NM_024426.6(WT1):c.695G>C (p.Ser232Thr) rs761913397
NM_024426.6(WT1):c.888-8dup

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