ClinVar Miner

List of variants studied for B cell deficiency by Genomic Medicine Center of Excellence, King Faisal Specialist Hospital and Research Centre

Included ClinVar conditions (66):
Minimum submission review status: Collection method:
Minimum conflict level:
ClinVar version:
Total variants: 47
Download table as spreadsheet
HGVS dbSNP gnomAD frequency
NM_001364905.1(LRBA):c.8077G>A (p.Ala2693Thr) rs3749574 0.21105
NM_012452.3(TNFRSF13B):c.310T>C (p.Cys104Arg) rs34557412 0.00403
NM_012092.4(ICOS):c.451G>C (p.Val151Leu) rs76778263 0.00226
NM_012452.3(TNFRSF13B):c.515G>A (p.Cys172Tyr) rs751216929 0.00020
NM_000212.3(ITGB3):c.2248C>T (p.Arg750Ter) rs121918450 0.00016
NM_001364905.1(LRBA):c.2195G>A (p.Ser732Asn) rs866092082 0.00005
NM_012452.3(TNFRSF13B):c.214C>T (p.Arg72Cys) rs375514495 0.00004
NM_203447.4(DOCK8):c.3043C>T (p.Arg1015Cys) rs369901029 0.00004
NM_001364905.1(LRBA):c.5401G>A (p.Glu1801Lys) rs199596976 0.00001
NM_000061.3(BTK):c.1566_1566+9del
NM_000061.3(BTK):c.1635T>A (p.Tyr545Ter)
NM_000061.3(BTK):c.1771dup (p.Tyr591fs)
NM_000061.3(BTK):c.763C>T (p.Arg255Ter) rs128621193
NM_000061.3(BTK):c.82C>T (p.Arg28Cys) rs1927168815
NM_000074.3(CD40LG):c.347-2A>G rs1569377237
NM_001250.6(CD40):c.256+2T>C rs774195387
NM_001282933.2(ZNF341):c.263T>C (p.Leu88Pro)
NM_001322934.2(NFKB2):c.2557C>T (p.Arg853Ter) rs397514332
NM_001364905.1(LRBA):c.1412GAG[1] (p.Gly472del)
NM_001364905.1(LRBA):c.1933C>T (p.Arg645Ter)
NM_001364905.1(LRBA):c.2351A>T (p.Tyr784Phe)
NM_001364905.1(LRBA):c.3985_3986del (p.Asp1329fs)
NM_001364905.1(LRBA):c.4759_4762del (p.Thr1587fs)
NM_001364905.1(LRBA):c.5629del (p.Val1878fs)
NM_001364905.1(LRBA):c.6624_6625del (p.Glu2208fs) rs727503779
NM_001364905.1(LRBA):c.8078C>T (p.Ala2693Val) rs562981599
NM_001364905.1(LRBA):c.894+5A>G
NM_003998.4(NFKB1):c.1753-1G>T
NM_003998.4(NFKB1):c.2240del (p.Leu747fs)
NM_005026.5(PIK3CD):c.2347+3G>A
NM_005026.5(PIK3CD):c.3061G>A (p.Glu1021Lys) rs397518423
NM_006979.3(SLC39A7):c.176_199dup (p.His66_Thr67insSerHisAlaHisGlyHisGlyHis)
NM_006979.3(SLC39A7):c.868C>T (p.Arg290Ter)
NM_012092.4(ICOS):c.451G>A (p.Val151Ile)
NM_012452.3(TNFRSF13B):c.61+1G>T rs1016142312
NM_013314.4(BLNK):c.145C>T (p.Arg49Ter)
NM_020661.4(AICDA):c.169G>A (p.Val57Met) rs786205474
NM_139276.3(STAT3):c.1309C>T (p.His437Tyr)
NM_139276.3(STAT3):c.1869G>T (p.Trp623Cys)
NM_139276.3(STAT3):c.1916C>T (p.Pro639Leu)
NM_139276.3(STAT3):c.974G>A (p.Arg325Gln)
NM_181523.3(PIK3R1):c.1568+2T>C rs780724594
NM_181523.3(PIK3R1):c.649G>A (p.Glu217Lys) rs540361957
NM_203447.4(DOCK8):c.1797+1G>T
NM_203447.4(DOCK8):c.3175dup (p.Leu1059fs)
NM_203447.4(DOCK8):c.387G>C (p.Trp129Cys)
NM_203447.4:c.-469_156+28del

The information on this website is not intended for direct diagnostic use or medical decision-making without review by a genetics professional. Individuals should not change their health behavior solely on the basis of information contained on this website. Neither the University of Utah nor the National Institutes of Health independently verfies the submitted information. If you have questions about the information contained on this website, please see a health care professional.