ClinVar Miner

List of variants studied for perceptual disorders by Center for Statistical Genetics, Columbia University

Included ClinVar conditions (765):
Minimum submission review status: Collection method:
Minimum conflict level:
ClinVar version:
Total variants: 46
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HGVS dbSNP gnomAD frequency
NM_206933.4(USH2A):c.2522C>A (p.Ser841Tyr) rs111033282 0.00569
NM_016366.3(CABP2):c.637+1G>T rs149712664 0.00102
NM_002850.4(PTPRS):c.2552G>T (p.Arg851Leu) rs199604489 0.00037
NM_000441.2(SLC26A4):c.2174_2177dup (p.Leu727fs) rs1421964916 0.00005
NM_002850.4(PTPRS):c.3343G>A (p.Ala1115Thr) rs769925793 0.00004
NM_206933.4(USH2A):c.908G>A (p.Arg303His) rs371777049 0.00004
NM_004004.6(GJB2):c.71G>A (p.Trp24Ter) rs104894396 0.00002
NM_005921.2(MAP3K1):c.548G>A (p.Arg183Gln) rs1454725137 0.00002
NM_016239.4(MYO15A):c.4108C>T (p.Arg1370Cys) rs878854411 0.00002
NM_001200.4(BMP2):c.178A>C (p.Met60Leu) rs773113395 0.00001
NM_002473.6(MYH9):c.3682G>A (p.Glu1228Lys) rs746956415 0.00001
NM_014918.5(CHSY1):c.779G>A (p.Arg260Gln) rs1280894999 0.00001
NM_016239.4(MYO15A):c.6634G>A (p.Glu2212Lys) rs371352836 0.00001
NM_177398.4(LMX1A):c.1106T>C (p.Ile369Thr) rs763320093 0.00001
Multiple alleles
NM_000260.4(MYO7A):c.4107G>T (p.Gln1369His) rs1565440220
NM_000260.4(MYO7A):c.6377del (p.Pro2126fs) rs2135798786
NM_000307.5(POU3F4):c.782C>A (p.Ser261Ter)
NM_001142966.3(GREB1L):c.347C>T (p.Thr116Ile) rs1333304296
NM_001145319.2(PLS1):c.1087C>T (p.Leu363Phe) rs1560070780
NM_001256317.3(TMPRSS3):c.205+6T>A
NM_001354604.2(MITF):c.984T>A (p.Asn328Lys)
NM_001384140.1(PCDH15):c.3285G>T (p.Leu1095=) rs374940427
NM_001384140.1(PCDH15):c.4671+1541G>T
NM_003246.4(THBS1):c.1470del (p.Ile491fs)
NM_003246.4(THBS1):c.698C>A (p.Ser233Tyr)
NM_004004.6(GJB2):c.35del (p.Gly12fs) rs80338939
NM_004604.5(STX4):c.232+6T>C
NM_005612.5(REST):c.1244G>C (p.Cys415Ser) rs2109573013
NM_006005.3(WFS1):c.2051C>T (p.Ala684Val) rs387906930
NM_006005.3(WFS1):c.2141A>G (p.Asn714Ser)
NM_006005.3(WFS1):c.2389G>A (p.Asp797Asn) rs1553879004
NM_006005.3(WFS1):c.2590G>A (p.Glu864Lys) rs74315205
NM_016239.4(MYO15A):c.1378C>T (p.Gln460Ter)
NM_016239.4(MYO15A):c.3944G>A (p.Gly1315Glu) rs878854410
NM_016239.4(MYO15A):c.4780G>C (p.Asp1594His) rs878854412
NM_016239.4(MYO15A):c.5335del (p.Leu1779fs) rs878854413
NM_016239.4(MYO15A):c.5809C>T (p.Arg1937Cys) rs749465098
NM_016239.4(MYO15A):c.6146C>A (p.Pro2049His) rs878854414
NM_016239.4(MYO15A):c.6178-2A>G rs878854415
NM_016239.4(MYO15A):c.6589C>T (p.Gln2197Ter) rs779445819
NM_016239.4(MYO15A):c.742C>G (p.Arg248Gly) rs878854409
NM_016239.4(MYO15A):c.9303+5G>A rs1555547215
NM_022124.6(CDH23):c.9585T>G (p.Tyr3195Ter)
NM_173477.5(USH1G):c.314C>T (p.Ala105Val) rs1567940507
NM_173477.5(USH1G):c.854dup (p.Ala286fs) rs1567939718

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