ClinVar Miner

List of variants studied for cranial nerve neuropathy by Centre for Mendelian Genomics, University Medical Centre Ljubljana

Included ClinVar conditions (197):
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Total variants: 63
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HGVS dbSNP gnomAD frequency
NM_001098.3(ACO2):c.719G>C (p.Gly240Ala) rs141878785 0.00064
NM_000372.5(TYR):c.1037-7T>A rs61754381 0.00051
NM_000372.5(TYR):c.1352A>G (p.Tyr451Cys) rs376823382 0.00022
NM_033409.4(SLC52A3):c.58A>C (p.Ile20Leu) rs148387972 0.00010
NM_025114.4(CEP290):c.4723A>T (p.Lys1575Ter) rs137852834 0.00009
NM_153704.6(TMEM67):c.1843T>C (p.Cys615Arg) rs201893408 0.00009
NM_000180.4(GUCY2D):c.1315G>A (p.Gly439Arg) rs140638938 0.00006
NM_000372.5(TYR):c.1A>G (p.Met1Val) rs28940881 0.00006
NM_000153.4(GALC):c.850G>A (p.Gly284Ser) rs377274761 0.00003
NM_001379500.1(COL18A1):c.929-2A>G rs765919785 0.00003
NM_017777.4(MKS1):c.1476T>G (p.Cys492Trp) rs137853105 0.00003
NM_000372.5(TYR):c.265T>C (p.Cys89Arg) rs28940877 0.00002
NM_001042492.3(NF1):c.4330A>G (p.Lys1444Glu) rs137854550 0.00002
NM_006796.3(AFG3L2):c.2030T>C (p.Leu677Pro) rs778455371 0.00002
NM_153704.6(TMEM67):c.1321C>T (p.Arg441Cys) rs752362727 0.00002
NM_153704.6(TMEM67):c.514C>T (p.Arg172Ter) rs765468645 0.00002
NM_000089.4(COL1A2):c.280-7T>C rs750868020 0.00001
NM_000273.3(GPR143):c.947G>A (p.Cys316Tyr) rs1348263627 0.00001
NM_001039348.3(EFEMP1):c.1189T>C (p.Tyr397His) rs1553348960 0.00001
NM_001042492.3(NF1):c.1987G>A (p.Gly663Arg) rs140653372 0.00001
NM_001042492.3(NF1):c.2041C>T (p.Arg681Ter) rs768638173 0.00001
NM_001098.3(ACO2):c.76C>T (p.Leu26=) rs1057518832 0.00001
NM_001822.7(CHN1):c.962G>C (p.Arg321Thr) rs202153128 0.00001
NM_017777.4(MKS1):c.1166-2A>C rs1488635637 0.00001
NM_198525.3(KIF7):c.434A>C (p.Tyr145Ser) rs758361736 0.00001
GRCh37/hg19 15q11.2-13.1(chr15:23810397-29213787)
GRCh37/hg19 17p11.2(chr17:16936603-18184130)
GRCh37/hg19 17p13.3(chr17:2339561-2826073)
GRCh37/hg19 1q21.1-21.2(chr1:146618988-147824207)
GRCh37/hg19 6p24.1-23(chr6:12536624-13968949)
GRCh37/hg19 7q36.3(chr7:156333296-156556779)
GRCh37/hg19 7q36.3(chr7:156656444-156866708)
GRCh37/hg19 9q31.3(chr9:111624558-111812725)
NC_012920.1:m.11443A>C rs1556423952
NM_000153.4(GALC):c.196G>A (p.Ala66Thr) rs1057518843
NM_000180.4(GUCY2D):c.129_134del (p.Leu44_Leu45del) rs552184470
NM_000266.4(NDP):c.314C>T (p.Ala105Val) rs1057518836
NM_000273.3(GPR143):c.12_36del (p.Leu6fs) rs1057518787
NM_000274.4(OAT):c.875A>G (p.Lys292Arg) rs1057518927
NM_000539.3(RHO):c.891C>G (p.Ser297Arg) rs142285818
NM_001032221.6(STXBP1):c.364C>T (p.Arg122Ter) rs794727792
NM_001042492.3(NF1):c.1721+3A>G rs1057518904
NM_001098.3(ACO2):c.2253dup (p.Ile752fs) rs2066653512
NM_001098.3(ACO2):c.75C>T (p.Val25=) rs1057518833
NM_001127222.2(CACNA1A):c.5419G>T (p.Ala1807Ser) rs1555736565
NM_001184880.2(PCDH19):c.1091dup (p.Tyr366fs) rs758946412
NM_001349338.3(FOXP1):c.1396C>G (p.Pro466Ala) rs1057518926
NM_001367721.1(CASK):c.2236+1delinsAT rs1555975523
NM_001367721.1(CASK):c.2521-2A>G rs398122845
NM_001372066.1(TFAP2A):c.1043_1044del (p.Lys348fs) rs1554110735
NM_001379110.1(SLC9A6):c.1190C>A (p.Ala397Glu) rs1556619324
NM_001379500.1(COL18A1):c.3448C>T (p.Arg1150Ter) rs1057518802
NM_001999.4(FBN2):c.7663A>G (p.Thr2555Ala) rs1765343397
NM_002547.3(OPHN1):c.746T>C (p.Leu249Pro) rs1057518963
NM_003072.5(SMARCA4):c.1358C>T (p.Thr453Ile) rs1057518862
NM_006940.6(SOX5):c.482-2A>C rs1057518845
NM_015100.4(POGZ):c.2771del (p.Pro924fs) rs1553212868
NM_015335.5(MED13L):c.1971del (p.Asp657fs) rs1555247805
NM_019098.5(CNGB3):c.819_826del (p.Arg274fs) rs775796581
NM_021728.4(OTX2):c.191_193delinsGG (p.Leu64fs) rs1555350397
NM_025114.4(CEP290):c.2941C>T (p.Gln981Ter) rs1057518822
NM_153704.6(TMEM67):c.2418_2423dup (p.805_806MN[3]) rs1554558365
m.3700G>A rs397515508

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