ClinVar Miner

List of variants studied for amino acid metabolism disease by Rady Children's Institute for Genomic Medicine, Rady Children's Hospital San Diego

Included ClinVar conditions (436):
Minimum submission review status: Collection method:
Minimum conflict level:
ClinVar version:
Total variants: 56
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HGVS dbSNP gnomAD frequency
NM_001370658.1(BTD):c.1270G>C (p.Asp424His) rs13078881 0.03225
NM_000016.6(ACADM):c.985A>G (p.Lys329Glu) rs77931234 0.00363
NM_183050.4(BCKDHB):c.832G>A (p.Gly278Ser) rs386834233 0.00061
NM_001002755.4(NFU1):c.622G>T (p.Gly208Cys) rs374514431 0.00012
NM_000254.3(MTR):c.3518C>T (p.Pro1173Leu) rs121913578 0.00009
NM_001352514.2(HLCS):c.1974dup (p.Val659fs) rs767533946 0.00009
NM_006623.4(PHGDH):c.1468G>A (p.Val490Met) rs121907987 0.00006
NM_000255.4(MMUT):c.850G>T (p.Gly284Ter) rs761477436 0.00004
NM_000018.4(ACADVL):c.1097G>A (p.Arg366His) rs112406105 0.00003
NM_000170.3(GLDC):c.911C>T (p.Pro304Leu) rs1207147043 0.00003
NM_001370658.1(BTD):c.1147T>G (p.Phe383Val) rs104893686 0.00002
NM_000170.3(GLDC):c.2614A>T (p.Lys872Ter) rs1430968530 0.00001
NM_000170.3(GLDC):c.505T>C (p.Ser169Pro) rs1356375715 0.00001
NM_000255.4(MMUT):c.322C>T (p.Arg108Cys) rs121918257 0.00001
NM_000481.4(AMT):c.958C>T (p.Arg320Cys) rs866625610 0.00001
NM_000531.6(OTC):c.847G>C (p.Gly283Arg) rs2068530349 0.00001
NM_000709.4(BCKDHA):c.1234G>A (p.Val412Met) rs398123490 0.00001
NM_001352514.2(HLCS):c.2182G>A (p.Gly728Ser) rs119103230 0.00001
NM_002860.4(ALDH18A1):c.88+1G>A rs556267618 0.00001
NM_012213.3(MLYCD):c.8G>A (p.Gly3Asp) rs121908081 0.00001
NM_054012.4(ASS1):c.910C>T (p.Arg304Trp) rs121908642 0.00001
NM_183050.4(BCKDHB):c.410C>T (p.Ala137Val) rs776631396 0.00001
NM_000048.4(ASL):c.571C>G (p.Arg191Gly) rs143508372
NM_000116.5(TAFAZZIN):c.811C>T (p.Gln271Ter) rs1298362744
NM_000170.3(GLDC):c.1545G>C (p.Arg515Ser) rs121964976
NM_000170.3(GLDC):c.2690G>A (p.Trp897Ter)
NM_000170.3(GLDC):c.846_847del (p.Arg282fs)
NM_000255.4(MMUT):c.1160C>A (p.Thr387Lys)
NM_000255.4(MMUT):c.2114T>G (p.Ile705Arg) rs772888575
NM_000255.4(MMUT):c.671_678dup (p.Val227fs) rs758008398
NM_000282.4(PCCA):c.1899+4_1899+7del rs794727334
NM_000481.4(AMT):c.16del (p.Ser6fs) rs1553638907
NM_000481.4(AMT):c.695_696+21del rs1553638457
NM_000481.4(AMT):c.797T>C (p.Leu266Pro) rs2049051428
NM_000531.6(OTC):c.275G>A (p.Arg92Gln) rs66550389
NM_000531.6(OTC):c.386G>A (p.Arg129His) rs66656800
NM_000531.6(OTC):c.437C>A (p.Ser146Ter)
NM_000531.6(OTC):c.604C>T (p.His202Tyr) rs72558408
NM_000531.6(OTC):c.607T>C (p.Ser203Pro)
NM_000531.6(OTC):c.608C>T (p.Ser203Phe) rs72558410
NM_000532.5(PCCB):c.990dup (p.Glu331Ter) rs786200983
NM_000687.4(AHCY):c.106C>T (p.Arg36Trp)
NM_000687.4(AHCY):c.142G>A (p.Ala48Thr)
NM_001127222.2(CACNA1A):c.5393C>T (p.Ser1798Leu) rs1064794261
NM_001258392.3(CLPB):c.455+1G>A rs1856507751
NM_001271.4(CHD2):c.2636C>T (p.Ala879Val) rs1555442813
NM_001271.4(CHD2):c.2670C>G (p.Asn890Lys)
NM_001271.4(CHD2):c.3937C>T (p.Arg1313Ter) rs1555444702
NM_001271.4(CHD2):c.4909C>T (p.Arg1637Ter) rs864309547
NM_004975.4(KCNB1):c.587T>G (p.Ile196Ser)
NM_004975.4(KCNB1):c.629C>T (p.Thr210Met) rs1555889162
NM_006721.4(ADK):c.642_645del (p.Ser215fs)
NM_006721.4(ADK):c.916C>T (p.Gln306Ter)
NM_014252.4(SLC25A15):c.95C>G (p.Thr32Arg) rs121908536
NM_032861.4(SERAC1):c.1339C>T (p.Arg447Ter)
NM_054012.4(ASS1):c.774-2A>G rs1588496214

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