ClinVar Miner

List of variants studied for X-linked disease by Genomic Research Center, Shahid Beheshti University of Medical Sciences

Included ClinVar conditions (275):
Minimum submission review status: Collection method:
Minimum conflict level:
ClinVar version:
Total variants: 57
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HGVS dbSNP gnomAD frequency
NM_001399.5(EDA):c.206G>T (p.Arg69Leu) rs132630309 0.00312
NM_001110792.2(MECP2):c.626C>T (p.Thr209Met) rs61749714 0.00064
NM_001123385.2(BCOR):c.2035G>A (p.Val679Ile) rs144722432 0.00053
NM_000047.3(ARSL):c.1189G>A (p.Gly397Arg) rs201424543 0.00049
NM_033380.3(COL4A5):c.2510-33A>G rs104886358 0.00039
NM_020717.5(SHROOM4):c.436C>T (p.Arg146Trp) rs189694750 0.00022
NM_002139.4(RBMX):c.389-8T>C rs181515589 0.00011
NM_002547.3(OPHN1):c.2168A>G (p.Asp723Gly) rs374431961 0.00011
NM_020717.5(SHROOM4):c.3071T>C (p.Leu1024Pro) rs1557249087 0.00005
NM_007325.5(GRIA3):c.813G>C (p.Gln271His) rs756316953 0.00004
NM_001256789.3(CACNA1F):c.1108G>A (p.Val370Ile) rs782458308 0.00002
NM_005120.3(MED12):c.6267+166G>A rs1247198443 0.00002
NM_012216.4(MID2):c.491G>A (p.Arg164His) rs778859599 0.00002
NM_020717.5(SHROOM4):c.3955G>A (p.Glu1319Lys) rs782659789 0.00002
NM_000033.4(ABCD1):c.1452C>G (p.Pro484=) rs782546330 0.00001
NM_000166.6(GJB1):c.670C>T (p.Arg224Cys) rs1426533412 0.00001
NM_001001344.3(ATP2B3):c.3284G>A (p.Arg1095Gln) rs782067205 0.00001
NM_001110556.2(FLNA):c.546G>C (p.Gln182His) rs1557179648 0.00001
NM_001159699.2(FHL1):c.499G>A (p.Val167Met) rs1332573754 0.00001
NM_001184.4(ATR):c.3152G>A (p.Arg1051His) rs770645649 0.00001
NM_001267550.2(TTN):c.46771T>C (p.Tyr15591His) rs775496863 0.00001
NM_001320752.2(STS):c.1111A>G (p.Ile371Val) rs748174656 0.00001
NM_002547.3(OPHN1):c.215T>C (p.Ile72Thr) rs763066236 0.00001
NM_004187.5(KDM5C):c.3442G>A (p.Val1148Met) rs782205045 0.00001
NM_005120.3(MED12):c.3210-27C>T rs752463122 0.00001
NM_015107.3(PHF8):c.2258G>A (p.Arg753Gln) rs1263803925 0.00001
NM_015884.4(MBTPS2):c.529A>C (p.Ile177Leu) rs766760741 0.00001
NM_181672.3(OGT):c.349C>T (p.Arg117Cys) rs1317050680 0.00001
NM_000166.6(GJB1):c.425G>A (p.Arg142Gln) rs786204123
NM_000266.4(NDP):c.200G>T (p.Gly67Val) rs1460859456
NM_000381.4(MID1):c.757-5831A>G rs1555896387
NM_000444.6(PHEX):c.1587-1G>A rs886041839
NM_000475.5(NR0B1):c.1267del (p.His423fs) rs1569268048
NM_000489.6(ATRX):c.5968TCT[2] (p.Ser1992del) rs782391479
NM_001039591.3(USP9X):c.3304G>A (p.Ala1102Thr) rs1555927212
NM_001111125.3(IQSEC2):c.1637G>A (p.Trp546Ter) rs2074379209
NM_001111125.3(IQSEC2):c.3054G>A (p.Thr1018=) rs782748833
NM_001278116.2(L1CAM):c.2278C>T (p.Arg760Ter) rs797045673
NM_001330574.2(ZNF711):c.2210T>G (p.Leu737Arg) rs1555975302
NM_001356.5(DDX3X):c.1052G>A (p.Arg351Gln) rs1057518707
NM_001356.5(DDX3X):c.58G>T (p.Asp20Tyr) rs1569233520
NM_001367721.1(CASK):c.824G>A (p.Trp275Ter) rs1602424764
NM_001368397.1(FRMPD4):c.580G>A (p.Val194Ile) rs2060020376
NM_002578.5(PAK3):c.534AGA[4] (p.Glu182del) rs749370794
NM_004187.5(KDM5C):c.*129C>T rs1602156447
NM_004586.3(RPS6KA3):c.2185C>T (p.Arg729Trp) rs1555924331
NM_004595.5(SMS):c.13C>G (p.Arg5Gly) rs1921698887
NM_005120.3(MED12):c.6177_6191del (p.Gln2072_Gln2076del) rs767827315
NM_005120.3(MED12):c.6241CAG[7] (p.Gln2086dup) rs786200971
NM_005634.3(SOX3):c.735_737dup (p.Ala248dup) rs398124211
NM_006517.5(SLC16A2):c.1170+4_1170+7del rs1555989846
NM_006517.5(SLC16A2):c.25G>A (p.Glu9Lys) rs933036653
NM_006517.5(SLC16A2):c.667T>G (p.Tyr223Asp) rs1930457917
NM_014927.5(CNKSR2):c.1734G>A (p.Trp578Ter) rs1569261319
NM_020717.5(SHROOM4):c.2672G>T (p.Ser891Ile) rs1569546782
NM_031407.7(HUWE1):c.4639G>A (p.Val1547Met) rs1569473370
NM_144499.3(GNAT1):c.488A>C (p.Tyr163Ser) rs1559746613

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