List of variants reported as benign for X-linked disease by Diagnostic Laboratory, Department of Genetics, University Medical Center Groningen

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Total variants: 16

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HGVS	dbSNP	gnomAD frequency
NM_001001344.3(ATP2B3):c.790+17G>C	rs2980013	0.99748
NM_001001344.3(ATP2B3):c.1473A>G (p.Gly491=)	rs3020949	0.99114
NM_001001344.3(ATP2B3):c.2326+11C>T	rs3020957	0.95109
NM_001555.5(IGSF1):c.948G>A (p.Val316=)	rs5932877	0.91610
NM_001001344.3(ATP2B3):c.2839+14G>T	rs3020959	0.88308
NM_000252.3(MTM1):c.1260+3G>A	rs222410	0.58566
NM_001555.5(IGSF1):c.1347A>G (p.Glu449=)	rs1128617	0.48301
NM_001001344.3(ATP2B3):c.2592G>C (p.Val864=)	rs2269415	0.41962
NM_001167.4(XIAP):c.1268A>C (p.Gln423Pro)	rs5956583	0.38953
NM_001555.5(IGSF1):c.2556T>C (p.Tyr852=)	rs4830219	0.36154
NM_000074.3(CD40LG):c.410-13T>C	rs3092923	0.27747
NM_001184880.2(PCDH19):c.1627C>T (p.Leu543=)	rs1953337	0.19198
NM_000074.3(CD40LG):c.148T>C (p.Leu50=)	rs1126535	0.18453
NM_001111125.3(IQSEC2):c.4408G>A (p.Ala1470Thr)	rs191886831	0.00894
NM_001001344.3(ATP2B3):c.3052-5C>T	rs189012896	0.00714
NM_007325.5(GRIA3):c.268+16757dup	rs778944548

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