ClinVar Miner

List of variants reported as benign for adenocarcinoma by Illumina Laboratory Services, Illumina

Included ClinVar conditions (109):
Minimum submission review status: Collection method:
Minimum conflict level:
ClinVar version:
Total variants: 165
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HGVS dbSNP gnomAD frequency
NM_004360.4(CDH1):c.*2047A>G rs8045438 0.98944
NM_019040.5(ELP4):c.*3208C>T rs608293 0.88020
NM_019040.5(ELP4):c.*3514_*3517dup rs397795797 0.87931
NM_004360.5(CDH1):c.48+6C>T rs3743674 0.80384
NM_019040.5(ELP4):c.*5226T>A rs1506 0.72043
NM_019040.5(ELP4):c.*2452C>T rs3026401 0.70691
NM_004360.5(CDH1):c.2076T>C (p.Ala692=) rs1801552 0.70379
NM_000245.4(MET):c.*1428G>A rs1621 0.63315
NM_019040.5(ELP4):c.*4250C>T rs12421026 0.42881
NM_000245.4(MET):c.*2240G>A rs6566 0.34157
NM_000245.4(MET):c.4092G>A (p.Pro1364=) rs41737 0.34093
NM_000245.4(MET):c.*1028A>G rs41738 0.34071
NM_000245.4(MET):c.4017G>A (p.Ala1339=) rs2023748 0.34017
NM_000245.4(MET):c.*1326A>G rs41739 0.34010
NM_000245.4(MET):c.3858C>T (p.Asp1286=) rs41736 0.33828
NM_019040.5(ELP4):c.*3703G>A rs3026398 0.22983
NM_004360.5(CDH1):c.*1120T>C rs13689 0.18034
NM_004360.5(CDH1):c.*54C>T rs1801026 0.17023
NM_000245.4(MET):c.1944A>G (p.Gln648=) rs13223756 0.16754
NM_019040.5(ELP4):c.*3998C>T rs662702 0.14929
NM_004360.5(CDH1):c.1937-13T>C rs2276330 0.09635
NM_004360.5(CDH1):c.*589C>T rs8049282 0.07789
NM_000245.4(MET):c.534C>T (p.Ser178=) rs35775721 0.07211
NM_001368894.2(PAX6):c.808-12C>T rs667773 0.05916
NM_000245.4(MET):c.*684G>A rs12540703 0.05662
NM_019040.5(ELP4):c.*2114C>G rs16922475 0.05615
NM_000245.4(MET):c.1131C>T (p.Ile377=) rs28444388 0.05590
NM_019040.5(ELP4):c.*3509A>G rs542906080 0.04927
NM_004360.5(CDH1):c.531+10G>C rs33963999 0.03907
NM_004360.5(CDH1):c.2253C>T (p.Asn751=) rs33964119 0.03869
NM_000245.4(MET):c.144G>A (p.Ala48=) rs11762213 0.03399
NM_004360.5(CDH1):c.48+5C>G rs77312180 0.03370
NM_019040.5(ELP4):c.*2673_*2674del rs141022497 0.02792
NM_019040.5(ELP4):c.*4105C>T rs73477656 0.02650
NM_000245.4(MET):c.*216C>A rs149188493 0.02223
NM_004360.5(CDH1):c.1896C>T (p.His632=) rs33969373 0.02054
NM_004360.5(CDH1):c.*621C>T rs33956791 0.02011
NM_024529.5(CDC73):c.*1267A>G rs78218016 0.01764
NM_000245.4(MET):c.1124A>G (p.Asn375Ser) rs33917957 0.01723
NM_004360.5(CDH1):c.*410A>T rs33956133 0.01714
NM_004360.5(CDH1):c.2634C>T (p.Gly878=) rs2229044 0.01638
NM_004360.5(CDH1):c.*1873G>A rs35779350 0.01533
NM_024529.5(CDC73):c.*580A>T rs191600804 0.01264
NM_001368894.2(PAX6):c.*842G>A rs115045926 0.01172
NM_024529.5(CDC73):c.*2950A>G rs144681513 0.01153
NM_024529.5(CDC73):c.*3507G>T rs151216299 0.01140
NM_000245.4(MET):c.-14-13C>T rs36080330 0.00978
NM_004360.5(CDH1):c.933C>G (p.Leu311=) rs35539711 0.00974
NM_019040.5(ELP4):c.*3851C>T rs141344418 0.00935
NM_000245.4(MET):c.2975C>T (p.Thr992Ile) rs56391007 0.00911
NM_019040.5(ELP4):c.*3994C>A rs79739975 0.00857
NM_019040.5(ELP4):c.*3425C>T rs3026399 0.00813
NM_001368894.2(PAX6):c.*417C>T rs55756603 0.00810
NM_000245.4(MET):c.1085T>C (p.Met362Thr) rs77523018 0.00742
NM_000245.4(MET):c.390C>T (p.Leu130=) rs150588908 0.00740
NM_004360.5(CDH1):c.*1835T>C rs13339481 0.00738
NM_019040.5(ELP4):c.*4172A>C rs73477658 0.00701
NM_000245.4(MET):c.948A>G (p.Ile316Met) rs35225896 0.00641
NM_004360.5(CDH1):c.*1662G>C rs33967108 0.00618
NM_004360.5(CDH1):c.*988G>A rs9282653 0.00604
NM_000245.4(MET):c.*2202G>A rs14456 0.00515
NM_024529.5(CDC73):c.1185A>G (p.Gln395=) rs116358657 0.00511
NM_000245.4(MET):c.*1987C>T rs76322625 0.00499
NM_024529.5(CDC73):c.*2304T>G rs144363422 0.00424
NM_019040.5(ELP4):c.*2740G>A rs149777109 0.00394
NM_000245.4(MET):c.*1220G>A rs139535303 0.00336
NM_000245.4(MET):c.-14-4G>A rs144126521 0.00331
NM_000245.4(MET):c.2908C>T (p.Arg970Cys) rs34589476 0.00327
NM_019040.5(ELP4):c.*3242G>A rs187705792 0.00303
NM_000245.4(MET):c.*787G>A rs143472935 0.00290
NM_000245.4(MET):c.*231T>G rs59399612 0.00287
NM_000245.4(MET):c.*1010G>T rs150534017 0.00272
NM_004360.5(CDH1):c.1680G>C (p.Thr560=) rs35741240 0.00261
NM_000245.4(MET):c.*87G>A rs41281081 0.00250
NM_004360.5(CDH1):c.345G>A (p.Thr115=) rs1801023 0.00236
NM_019040.5(ELP4):c.*3713A>T rs138881442 0.00236
NM_000245.4(MET):c.*385G>A rs181068390 0.00235
NM_019040.5(ELP4):c.*5347T>C rs117590302 0.00220
NM_024529.5(CDC73):c.*2085G>C rs150030810 0.00217
NM_019040.5(ELP4):c.*4932G>A rs181818313 0.00198
NM_024529.5(CDC73):c.*518A>G rs190433473 0.00195
NM_019040.5(ELP4):c.*2040G>C rs183115097 0.00194
NM_000245.4(MET):c.*201C>T rs1129355 0.00192
NM_019040.5(ELP4):c.*3904G>A rs3026397 0.00189
NM_000245.4(MET):c.1715G>A (p.Ser572Asn) rs199771406 0.00188
NM_000245.4(MET):c.*2100C>T rs190739281 0.00165
NM_004360.5(CDH1):c.2292C>T (p.Asp764=) rs61747636 0.00159
NM_000245.4(MET):c.*1871G>A rs139377965 0.00152
NM_000245.4(MET):c.*1224C>T rs149713628 0.00150
NM_019040.5(ELP4):c.*4974C>T rs138035131 0.00148
NM_024529.5(CDC73):c.-95G>A rs143969598 0.00133
NM_019040.5(ELP4):c.*1302T>C rs146579778 0.00120
NM_001368894.2(PAX6):c.-107C>T rs111270711 0.00117
NM_000245.4(MET):c.*656G>A rs531456758 0.00104
NM_019040.5(ELP4):c.*2525C>A rs183433948 0.00096
NM_000245.4(MET):c.*602C>T rs147343288 0.00093
NM_000245.4(MET):c.*944A>G rs565768785 0.00076
NM_019040.5(ELP4):c.*2982G>A rs191399467 0.00076
NM_001368894.2(PAX6):c.873G>A (p.Gln291=) rs149053004 0.00075
NM_000245.4(MET):c.3549C>T (p.Gly1183=) rs371165052 0.00074
NM_024529.5(CDC73):c.*3524A>G rs548190260 0.00071
NM_024529.5(CDC73):c.1032T>G (p.Val344=) rs148612206 0.00070
NM_004360.5(CDH1):c.*1693G>T rs138279201 0.00069
NM_004360.5(CDH1):c.*746C>A rs140240766 0.00069
NM_000245.4(MET):c.1039G>A (p.Ala347Thr) rs200074800 0.00068
NM_001368894.2(PAX6):c.*891G>A rs530259403 0.00065
NM_000245.4(MET):c.467C>T (p.Ser156Leu) rs56311081 0.00061
NM_019040.5(ELP4):c.*3528A>G rs143185259 0.00060
NM_000245.4(MET):c.406G>A (p.Val136Ile) rs199701987 0.00058
NM_024529.5(CDC73):c.-11G>A rs80356643 0.00056
NM_000245.4(MET):c.3523-12C>G rs186524917 0.00053
NM_004360.5(CDH1):c.1744C>T (p.Leu582=) rs1801025 0.00045
NM_000245.4(MET):c.3810C>T (p.Gly1270=) rs200865810 0.00039
NM_001368894.2(PAX6):c.1179A>C (p.Thr393=) rs143477661 0.00038
NM_001368894.2(PAX6):c.753G>A (p.Val251=) rs145329506 0.00038
NM_001368894.2(PAX6):c.*841C>T rs530931929 0.00031
NM_019040.5(ELP4):c.*1783T>G rs140971065 0.00030
NM_024529.5(CDC73):c.-10G>T rs188082584 0.00024
NM_000245.4(MET):c.4105T>C (p.Leu1369=) rs45575438 0.00021
NM_000245.4(MET):c.3522+12G>T rs200624981 0.00019
NM_024529.5(CDC73):c.*1833A>G rs150894778 0.00018
NM_000245.4(MET):c.1263C>T (p.Thr421=) rs45499391 0.00016
NM_000245.4(MET):c.4087G>A (p.Ala1363Thr) rs45578433 0.00016
NM_024529.5(CDC73):c.*2427T>C rs372585994 0.00013
NM_004360.5(CDH1):c.2451G>A (p.Ala817=) rs149450874 0.00010
NM_024529.5(CDC73):c.*2677G>A rs192018514 0.00010
NM_000245.4(MET):c.110T>C (p.Val37Ala) rs201315884 0.00009
NM_004360.5(CDH1):c.1359C>T (p.His453=) rs114861467 0.00009
NM_004360.5(CDH1):c.1888C>G (p.Leu630Val) rs2276331 0.00009
NM_004360.5(CDH1):c.894C>T (p.Ala298=) rs139110184 0.00009
NM_024529.5(CDC73):c.*1499T>A rs138503809 0.00009
NM_004360.5(CDH1):c.1020G>A (p.Thr340=) rs61747632 0.00008
NM_000245.4(MET):c.960G>A (p.Ala320=) rs191198682 0.00007
NM_004360.5(CDH1):c.1298A>G (p.Asp433Gly) rs376097289 0.00007
NM_000245.4(MET):c.36C>T (p.Leu12=) rs188625702 0.00006
NM_000245.4(MET):c.4075G>A (p.Val1359Ile) rs752669237 0.00006
NM_004360.5(CDH1):c.*1691G>T rs373181046 0.00006
NM_019040.5(ELP4):c.*3092T>C rs371438311 0.00006
NM_024529.5(CDC73):c.*1083A>T rs367704451 0.00006
NM_000245.4(MET):c.3065G>A (p.Arg1022Gln) rs45612435 0.00005
NM_019040.5(ELP4):c.*2664G>A rs567720234 0.00005
NM_001368894.2(PAX6):c.909T>C (p.Ser303=) rs202154006 0.00004
NM_004360.5(CDH1):c.-63C>A rs572272864 0.00004
NM_000245.4(MET):c.*397A>G rs559231345 0.00003
NM_004360.5(CDH1):c.*209C>T rs35942505 0.00003
NM_004360.5(CDH1):c.304G>A (p.Ala102Thr) rs368492235 0.00003
NM_000245.4(MET):c.1965+14T>C rs543293293 0.00002
NM_001368894.2(PAX6):c.-316-8C>G rs566281941 0.00002
NM_004360.5(CDH1):c.2079C>T (p.Gly693=) rs771993728 0.00002
NM_019040.5(ELP4):c.*1714C>G rs180780893 0.00002
NM_001368894.2(PAX6):c.317G>A (p.Arg106Gln) rs769095184 0.00001
NM_004360.5(CDH1):c.*774A>G rs549231645 0.00001
NM_004360.5(CDH1):c.867G>A (p.Ala289=) rs754143182 0.00001
NM_024529.5(CDC73):c.*3063G>A rs182545034 0.00001
NM_000245.4(MET):c.*1233G>A rs560568639
NM_000245.4(MET):c.*1244G>A rs144559852
NM_000245.4(MET):c.*376G>T rs553602374
NM_000245.4(MET):c.-182C>A rs536603694
NM_004360.5(CDH1):c.*1176T>G rs9282654
NM_004360.5(CDH1):c.1308G>A (p.Leu436=) rs557551011
NM_004360.5(CDH1):c.2164+17dup rs34939176
NM_019040.5(ELP4):c.*1811A>C rs185968715
NM_019040.5(ELP4):c.*3164_*3165insAAAA rs34919147
NM_024529.5(CDC73):c.*3786T>A rs74130943
NM_024529.5(CDC73):c.*3786T>C rs74130943

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