List of variants reported as benign for spermatogenic failure by Illumina Laboratory Services, Illumina

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Total variants: 26

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HGVS	dbSNP	gnomAD frequency
NM_053054.4(CATSPER1):c.1954G>A (p.Val652Ile)	rs3814747	0.95986
NM_001015878.2(AURKC):c.-145G>C	rs11084490	0.86511
NM_001015878.2(AURKC):c.-128C>T	rs58264281	0.75512
NM_053054.4(CATSPER1):c.1222C>A (p.Arg408=)	rs2845570	0.44072
NM_031955.6(SPATA16):c.397A>G (p.Met133Val)	rs1515442	0.39106
NM_053054.4(CATSPER1):c.-92T>C	rs947847	0.34569
NM_053054.4(CATSPER1):c.397G>A (p.Gly133Ser)	rs1203998	0.34448
NM_053054.4(CATSPER1):c.54C>T (p.Asn18=)	rs1893316	0.20019
NM_031955.6(SPATA16):c.675C>T (p.Ser225=)	rs508508	0.17696
NM_053054.4(CATSPER1):c.2070C>T (p.Ala690=)	rs3829937	0.17199
NM_031955.6(SPATA16):c.232G>A (p.Glu78Lys)	rs1515441	0.11912
NM_031955.6(SPATA16):c.440G>A (p.Gly147Glu)	rs16846616	0.09632
NM_031955.6(SPATA16):c.720G>A (p.Arg240=)	rs55724801	0.02430
NM_001177949.2(SYCP3):c.-122T>A	rs17031944	0.02365
NM_031955.6(SPATA16):c.130T>A (p.Ser44Thr)	rs146572379	0.02122
NM_020244.3(CHPT1):c.1177-179C>T	rs17723833	0.01983
NM_020244.3(CHPT1):c.1177-157T>C	rs115013475	0.01299
NM_001177949.2(SYCP3):c.435A>G (p.Glu145=)	rs78591432	0.01236
NM_053054.4(CATSPER1):c.730G>A (p.Gly244Arg)	rs79062509	0.00566
NM_001177949.2(SYCP3):c.-53C>G	rs137993065	0.00185
NM_001015878.2(AURKC):c.235A>G (p.Ile79Val)	rs61736320	0.00180
NM_001177949.2(SYCP3):c.666A>G (p.Gln222=)	rs190337934	0.00043
NM_001177949.2(SYCP3):c.59A>G (p.Gln20Arg)	rs143228358	0.00020
NM_001015878.2(AURKC):c.*38G>A	rs35582299
NM_001177949.2(SYCP3):c.-106A>G	rs143456701
NM_001177949.2(SYCP3):c.454-13_454-9del	rs145003954

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