ClinVar Miner

List of variants studied for immune system disorder by Greenwood Genetic Center Diagnostic Laboratories, Greenwood Genetic Center

Included ClinVar conditions (902):
Minimum submission review status: Collection method:
Minimum conflict level:
ClinVar version:
Total variants: 41
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HGVS dbSNP gnomAD frequency
NM_012452.3(TNFRSF13B):c.310T>C (p.Cys104Arg) rs34557412 0.00403
NM_024570.4(RNASEH2B):c.529G>A (p.Ala177Thr) rs75184679 0.00141
NM_139027.6(ADAMTS13):c.3178C>T (p.Arg1060Trp) rs142572218 0.00088
NM_012452.3(TNFRSF13B):c.204dup (p.Leu69fs) rs72553875 0.00031
NM_006949.4(STXBP2):c.1247-1G>C rs140148806 0.00024
NM_001085487.3(MYSM1):c.219-1G>A rs201886018 0.00016
NM_032043.3(BRIP1):c.2392C>T (p.Arg798Ter) rs137852986 0.00010
NM_006767.4(LZTR1):c.1084C>T (p.Arg362Ter) rs189150283 0.00007
NM_000543.5(SMPD1):c.1133G>A (p.Arg378His) rs559088058 0.00006
NM_001113378.2(FANCI):c.1461T>A (p.Tyr487Ter) rs769248873 0.00005
NM_002834.5(PTPN11):c.794G>A (p.Arg265Gln) rs376607329 0.00003
NM_000271.5(NPC1):c.3289G>A (p.Asp1097Asn) rs758829443 0.00002
NM_000383.4(AIRE):c.1616C>T (p.Pro539Leu) rs179363889 0.00002
NM_000631.5(NCF4):c.529-2A>T rs199890705 0.00002
NM_001164277.2(SLC37A4):c.742C>T (p.Gln248Ter) rs781784543 0.00002
NM_000059.4(BRCA2):c.9891_9894dup (p.Gln3299fs) rs730881619 0.00001
NM_000271.5(NPC1):c.3570_3573dup (p.Ala1192fs) rs750323164 0.00001
NM_002834.5(PTPN11):c.922A>G (p.Asn308Asp) rs28933386 0.00001
NM_152564.5(VPS13B):c.11758C>T (p.Arg3920Ter) rs933746831 0.00001
NM_000051.4(ATM):c.237del (p.Lys79fs) rs730881303
NM_000051.4(ATM):c.3712_3716del (p.Leu1238fs) rs786201675
NM_000059.4(BRCA2):c.9246dup (p.Lys3083fs) rs886038189
NM_001083116.3(PRF1):c.963del (p.Glu323fs) rs2132476029
NM_001142864.4(PIEZO1):c.4341del (p.Tyr1448fs)
NM_001164277.2(SLC37A4):c.899G>A (p.Arg300His) rs193302903
NM_002351.5(SH2D1A):c.2T>C (p.Met1Thr) rs2147519353
NM_002834.5(PTPN11):c.1187A>G (p.Tyr396Cys)
NM_002834.5(PTPN11):c.1282G>T (p.Val428Leu) rs397507536
NM_002834.5(PTPN11):c.802G>A (p.Gly268Ser) rs397507527
NM_004985.5(KRAS):c.229G>T (p.Gly77Cys) rs2141509652
NM_005045.4(RELN):c.7120G>T (p.Glu2374Ter)
NM_005633.4(SOS1):c.1867T>A (p.Phe623Ile) rs727505093
NM_006912.6(RIT1):c.265T>C (p.Tyr89His) rs869025197
NM_006929.5(SKIC2):c.2203-1G>A
NM_006949.4(STXBP2):c.1621G>A (p.Gly541Ser) rs61736587
NM_032444.4(SLX4):c.838G>T (p.Gly280Ter)
NM_080647.1(TBX1):c.855G>C (p.Lys285Asn) rs2145836461
NM_152564.5(VPS13B):c.2158C>T (p.Gln720Ter) rs777593389
NM_152564.5(VPS13B):c.7073G>A (p.Trp2358Ter) rs1057516559
NM_152564.5(VPS13B):c.9331-1G>A rs386834119
NM_206937.2(LIG4):c.1904del (p.Lys635fs) rs375554612

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