ClinVar Miner

List of variants studied for bone development disease by Genetics and Molecular Pathology, SA Pathology

Included ClinVar conditions (588):
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ClinVar version:
Total variants: 44
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HGVS dbSNP gnomAD frequency
NM_016277.5(RAB23):c.434T>A (p.Leu145Ter) rs121908171 0.00037
NM_014140.4(SMARCAL1):c.836T>C (p.Phe279Ser) rs775057827 0.00006
NM_001844.5(COL2A1):c.446G>A (p.Arg149His) rs763538232 0.00002
NM_001844.5(COL2A1):c.968T>A (p.Met323Lys) rs1380248932 0.00001
NM_007317.3(KIF22):c.1387A>G (p.Thr463Ala) rs757545358 0.00001
NM_016277.5(RAB23):c.82C>T (p.Arg28Ter) rs765443042 0.00001
NM_181486.4(TBX5):c.902C>G (p.Ser301Cys) rs973621936 0.00001
NM_000088.4(COL1A1):c.1427G>T (p.Gly476Val)
NM_000088.4(COL1A1):c.1811del (p.Pro604fs)
NM_000088.4(COL1A1):c.2908_2911del (p.Arg970fs) rs1555572401
NM_000088.4(COL1A1):c.299-2A>G
NM_000112.4(SLC26A2):c.-26+1G>A
NM_000141.5(FGFR2):c.1025G>C (p.Cys342Ser) rs121918487
NM_000142.5(FGFR3):c.1118A>G (p.Tyr373Cys) rs121913485
NM_000142.5(FGFR3):c.1948A>G (p.Lys650Glu) rs78311289
NM_000142.5(FGFR3):c.749C>G (p.Pro250Arg) rs4647924
NM_000316.3(PTH1R):c.1393G>A (p.Glu465Lys) rs1683106396
NM_000346.4(SOX9):c.432-2A>T rs1908139210
NM_000451.4(SHOX):c.877T>C (p.Ter293Arg) rs137852559
NM_000474.4(TWIST1):c.352C>A (p.Arg118Ser) rs1554442015
NM_001024630.4(RUNX2):c.506G>A (p.Arg169Gln) rs104893995
NM_001024630.4(RUNX2):c.884del (p.Pro295fs) rs2150421218
NM_001174147.2(LMX1B):c.706G>C (p.Ala236Pro) rs1588307140
NM_001174147.2(LMX1B):c.741+1G>A rs1427331961
NM_001429.4(EP300):c.3098C>T (p.Ser1033Leu)
NM_001457.4(FLNB):c.5842C>T (p.Arg1948Ter) rs775301566
NM_001844.5(COL2A1):c.1420-1G>A
NM_001844.5(COL2A1):c.1693C>T (p.Arg565Cys) rs121912884
NM_001844.5(COL2A1):c.2293G>A (p.Gly765Ser)
NM_001851.6(COL9A1):c.1450-1G>T
NM_001851.6(COL9A1):c.1864G>A (p.Gly622Arg)
NM_001854.4(COL11A1):c.1245+6T>A rs2101944852
NM_001854.4(COL11A1):c.3276+1G>C rs2101406339
NM_002381.5(MATN3):c.361C>T (p.Arg121Trp) rs104893637
NM_003394.4(WNT10B):c.115G>T (p.Glu39Ter)
NM_004247.4(EFTUD2):c.1719+1G>A rs2145460853
NM_004247.4(EFTUD2):c.2033C>T (p.Thr678Met) rs781402078
NM_004247.4(EFTUD2):c.702+2T>C
NM_004380.3(CREBBP):c.1776G>C (p.Trp592Cys)
NM_004380.3(CREBBP):c.3068del (p.Glu1023fs)
NM_006766.5(KAT6A):c.1133C>G (p.Ser378Ter) rs2150886525
NM_006766.5(KAT6A):c.658C>T (p.Arg220Ter) rs1395351821
NM_017617.5(NOTCH1):c.2372A>G (p.Asn791Ser) rs2133358146
NM_020297.4(ABCC9):c.4375C>T (p.Leu1459Phe)

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