ClinVar Miner

List of variants in gene CHRNA2 reported as likely benign for brain disorder

Included ClinVar conditions (1834):
Minimum submission review status: Collection method:
Minimum conflict level:
Gene type:
ClinVar version:
Total variants: 260
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HGVS dbSNP gnomAD frequency
NM_000742.4(CHRNA2):c.*1873A>G rs146191907 0.00387
NM_000742.4(CHRNA2):c.1434C>A (p.Asp478Glu) rs56344740 0.00307
NM_000742.3(CHRNA2):c.*1882C>A rs570954015 0.00121
NM_000742.4(CHRNA2):c.383G>A (p.Gly128Asp) rs138682847 0.00058
NM_000742.4(CHRNA2):c.731A>G (p.Lys244Arg) rs146751925 0.00051
NM_000742.4(CHRNA2):c.1530C>T (p.Ile510=) rs149142237 0.00046
NM_000742.4(CHRNA2):c.710C>A (p.Thr237Lys) rs140350483 0.00045
NM_000742.4(CHRNA2):c.210C>T (p.Tyr70=) rs144316375 0.00041
NM_000742.4(CHRNA2):c.166A>T (p.Thr56Ser) rs144185168 0.00040
NM_000742.4(CHRNA2):c.1234G>A (p.Glu412Lys) rs141721605 0.00039
NM_000742.4(CHRNA2):c.140C>T (p.Thr47Met) rs74772771 0.00036
NM_000742.4(CHRNA2):c.340-15C>A rs373046238 0.00029
NM_000742.4(CHRNA2):c.745G>A (p.Ala249Thr) rs77710085 0.00029
NM_000742.4(CHRNA2):c.966G>A (p.Ser322=) rs140118184 0.00029
NM_000742.4(CHRNA2):c.295-12T>G rs369707163 0.00020
NM_000742.4(CHRNA2):c.1464+20G>A rs377015162 0.00019
NM_000742.4(CHRNA2):c.45C>T (p.Ser15=) rs149934219 0.00018
NM_000742.4(CHRNA2):c.173C>T (p.Thr58Ile) rs151268950 0.00015
NM_000742.4(CHRNA2):c.246C>T (p.Asp82=) rs201244136 0.00011
NM_000742.4(CHRNA2):c.1202A>G (p.Tyr401Cys) rs370964466 0.00009
NM_000742.4(CHRNA2):c.984C>T (p.Ile328=) rs371858399 0.00009
NM_000742.4(CHRNA2):c.1099C>T (p.Arg367Trp) rs751699392 0.00007
NM_000742.4(CHRNA2):c.759C>T (p.Pro253=) rs144913811 0.00007
NM_000742.4(CHRNA2):c.1158C>T (p.Pro386=) rs560790452 0.00005
NM_000742.4(CHRNA2):c.1222G>C (p.Val408Leu) rs771994243 0.00005
NM_000742.4(CHRNA2):c.1245G>A (p.Val415=) rs373599393 0.00005
NM_000742.4(CHRNA2):c.1431C>T (p.Ala477=) rs373912586 0.00005
NM_000742.4(CHRNA2):c.168C>T (p.Thr56=) rs200729883 0.00005
NM_000742.4(CHRNA2):c.202C>T (p.Arg68Trp) rs376970816 0.00005
NM_000742.4(CHRNA2):c.416T>C (p.Met139Thr) rs770447351 0.00005
NM_000742.4(CHRNA2):c.1073G>T (p.Ser358Ile) rs74341575 0.00004
NM_000742.4(CHRNA2):c.1117T>C (p.Cys373Arg) rs137965290 0.00004
NM_000742.4(CHRNA2):c.1123C>G (p.Pro375Ala) rs746613509 0.00004
NM_000742.4(CHRNA2):c.1317C>T (p.His439=) rs775578495 0.00004
NM_000742.4(CHRNA2):c.1569G>A (p.Pro523=) rs199993564 0.00004
NM_000742.4(CHRNA2):c.222G>A (p.Ala74=) rs369806823 0.00004
NM_000742.4(CHRNA2):c.276C>T (p.Ile92=) rs201944711 0.00004
NM_000742.4(CHRNA2):c.288C>T (p.Ile96=) rs561008438 0.00004
NM_000742.4(CHRNA2):c.289G>A (p.Asp97Asn) rs775714882 0.00004
NM_000742.4(CHRNA2):c.615T>G (p.Thr205=) rs370425843 0.00004
NM_000742.4(CHRNA2):c.777C>T (p.Phe259=) rs77769511 0.00004
NM_000742.4(CHRNA2):c.869C>T (p.Pro290Leu) rs767619637 0.00004
NM_000742.4(CHRNA2):c.906G>A (p.Ser302=) rs151068685 0.00004
NM_000742.4(CHRNA2):c.1002C>T (p.Phe334=) rs780941610 0.00003
NM_000742.4(CHRNA2):c.121C>T (p.Leu41Phe) rs796052307 0.00003
NM_000742.4(CHRNA2):c.1465-3C>T rs375469296 0.00003
NM_000742.4(CHRNA2):c.1575A>G (p.Leu525=) rs1040135347 0.00003
NM_000742.4(CHRNA2):c.228G>A (p.Pro76=) rs200277900 0.00003
NM_000742.4(CHRNA2):c.354C>T (p.Tyr118=) rs778279138 0.00003
NM_000742.4(CHRNA2):c.525C>T (p.Pro175=) rs1026442070 0.00003
NM_000742.4(CHRNA2):c.900C>T (p.Cys300=) rs779197511 0.00003
NM_000742.4(CHRNA2):c.1165C>T (p.Leu389Phe) rs796052303 0.00002
NM_000742.4(CHRNA2):c.1270G>A (p.Ala424Thr) rs767138285 0.00002
NM_000742.4(CHRNA2):c.247G>A (p.Val83Met) rs757700781 0.00002
NM_000742.4(CHRNA2):c.472A>G (p.Thr158Ala) rs756730967 0.00002
NM_000742.4(CHRNA2):c.558C>T (p.Asp186=) rs749496919 0.00002
NM_000742.4(CHRNA2):c.600G>A (p.Lys200=) rs764830161 0.00002
NM_000742.4(CHRNA2):c.762C>T (p.Asp254=) rs769975305 0.00002
NM_000742.4(CHRNA2):c.874G>A (p.Asp292Asn) rs774054592 0.00002
NM_000742.4(CHRNA2):c.924C>T (p.Thr308=) rs752321195 0.00002
NM_000742.4(CHRNA2):c.1014C>T (p.Phe338=) rs780056270 0.00001
NM_000742.4(CHRNA2):c.1059C>T (p.His353=) rs748482434 0.00001
NM_000742.4(CHRNA2):c.1098G>A (p.Val366=) rs767782606 0.00001
NM_000742.4(CHRNA2):c.1145G>A (p.Arg382Gln) rs888244000 0.00001
NM_000742.4(CHRNA2):c.1147C>A (p.Pro383Thr) rs757169328 0.00001
NM_000742.4(CHRNA2):c.1159G>A (p.Val387Met) rs749494357 0.00001
NM_000742.4(CHRNA2):c.1176C>T (p.Pro392=) rs764346961 0.00001
NM_000742.4(CHRNA2):c.1180C>T (p.Arg394Cys) rs1060503072 0.00001
NM_000742.4(CHRNA2):c.1200T>G (p.Ser400=) rs150333280 0.00001
NM_000742.4(CHRNA2):c.1248G>C (p.Val416=) rs370878600 0.00001
NM_000742.4(CHRNA2):c.12C>T (p.Ser4=) rs1057522016 0.00001
NM_000742.4(CHRNA2):c.1318G>A (p.Gly440Ser) rs1405035752 0.00001
NM_000742.4(CHRNA2):c.1335G>C (p.Gly445=) rs544902151 0.00001
NM_000742.4(CHRNA2):c.1340C>T (p.Ser447Leu) rs1812554029 0.00001
NM_000742.4(CHRNA2):c.1365G>T (p.Leu455=) rs756635424 0.00001
NM_000742.4(CHRNA2):c.1368G>A (p.Gln456=) rs370957296 0.00001
NM_000742.4(CHRNA2):c.1460C>T (p.Ser487Phe) rs994299183 0.00001
NM_000742.4(CHRNA2):c.1464+10G>T rs749942986 0.00001
NM_000742.4(CHRNA2):c.1464+7_1464+8del rs763426344 0.00001
NM_000742.4(CHRNA2):c.1551C>T (p.Ile517=) rs777412930 0.00001
NM_000742.4(CHRNA2):c.1552G>A (p.Gly518Ser) rs755631456 0.00001
NM_000742.4(CHRNA2):c.1557C>A (p.Leu519=) rs752689106 0.00001
NM_000742.4(CHRNA2):c.196C>G (p.Leu66Val) rs1473197891 0.00001
NM_000742.4(CHRNA2):c.223C>T (p.Arg75Cys) rs770949841 0.00001
NM_000742.4(CHRNA2):c.282G>A (p.Gln94=) rs1812812900 0.00001
NM_000742.4(CHRNA2):c.294+4C>T rs745958182 0.00001
NM_000742.4(CHRNA2):c.323A>C (p.Asn108Thr) rs564532686 0.00001
NM_000742.4(CHRNA2):c.324C>T (p.Asn108=) rs544939077 0.00001
NM_000742.4(CHRNA2):c.325G>A (p.Val109Ile) rs1341647863 0.00001
NM_000742.4(CHRNA2):c.333A>G (p.Leu111=) rs770131239 0.00001
NM_000742.4(CHRNA2):c.339+10C>A rs746630071 0.00001
NM_000742.4(CHRNA2):c.340-8A>C rs1427091098 0.00001
NM_000742.4(CHRNA2):c.346A>G (p.Ser116Gly) rs777177252 0.00001
NM_000742.4(CHRNA2):c.347G>T (p.Ser116Ile) rs541282922 0.00001
NM_000742.4(CHRNA2):c.381T>C (p.Phe127=) rs1346753064 0.00001
NM_000742.4(CHRNA2):c.429C>T (p.Pro143=) rs777692776 0.00001
NM_000742.4(CHRNA2):c.433A>G (p.Ile145Val) rs1064795580 0.00001
NM_000742.4(CHRNA2):c.526C>T (p.Pro176Ser) rs772750196 0.00001
NM_000742.4(CHRNA2):c.576C>T (p.Phe192=) rs148009259 0.00001
NM_000742.4(CHRNA2):c.606C>T (p.Gly202=) rs1812610117 0.00001
NM_000742.4(CHRNA2):c.609C>T (p.Ser203=) rs761237311 0.00001
NM_000742.4(CHRNA2):c.687C>T (p.Gly229=) rs1050947622 0.00001
NM_000742.4(CHRNA2):c.69A>C (p.Pro23=) rs1242888452 0.00001
NM_000742.4(CHRNA2):c.701T>C (p.Val234Ala) rs768590131 0.00001
NM_000742.4(CHRNA2):c.717C>T (p.Thr239=) rs1484589569 0.00001
NM_000742.4(CHRNA2):c.735C>T (p.Tyr245=) rs775595773 0.00001
NM_000742.4(CHRNA2):c.74-17C>A rs796052294 0.00001
NM_000742.4(CHRNA2):c.772G>A (p.Ala258Thr) rs200372256 0.00001
NM_000742.4(CHRNA2):c.790C>T (p.Leu264=) rs746292157 0.00001
NM_000742.4(CHRNA2):c.795G>A (p.Pro265=) rs756903177 0.00001
NM_000742.4(CHRNA2):c.834C>T (p.Leu278=) rs56189058 0.00001
NM_000742.4(CHRNA2):c.852G>A (p.Val284=) rs1357751027 0.00001
NM_000742.4(CHRNA2):c.873C>T (p.Ser291=) rs76140563 0.00001
NM_000742.4(CHRNA2):c.957G>A (p.Pro319=) rs375239013 0.00001
NM_000742.4(CHRNA2):c.990G>A (p.Glu330=) rs769608818 0.00001
NM_000742.4(CHRNA2):c.*1286del rs199764226
NM_000742.4(CHRNA2):c.1020C>T (p.Thr340=) rs2132652084
NM_000742.4(CHRNA2):c.1029C>A (p.Ile343=)
NM_000742.4(CHRNA2):c.1029C>T (p.Ile343=)
NM_000742.4(CHRNA2):c.1038C>T (p.Thr346=) rs1202844498
NM_000742.4(CHRNA2):c.1050C>T (p.Leu350=)
NM_000742.4(CHRNA2):c.105G>A (p.Arg35=) rs1812824307
NM_000742.4(CHRNA2):c.1068C>A (p.Ser356=) rs745774113
NM_000742.4(CHRNA2):c.1104G>A (p.Gly368=) rs2132651658
NM_000742.4(CHRNA2):c.1122G>T (p.Val374=)
NM_000742.4(CHRNA2):c.1126C>T (p.Arg376Trp) rs1018084204
NM_000742.4(CHRNA2):c.1155A>G (p.Pro385=)
NM_000742.4(CHRNA2):c.1161G>T (p.Val387=)
NM_000742.4(CHRNA2):c.1164G>A (p.Glu388=) rs1175481996
NM_000742.4(CHRNA2):c.116A>G (p.Asp39Gly) rs1812823861
NM_000742.4(CHRNA2):c.1173C>A (p.His391Gln) rs183676062
NM_000742.4(CHRNA2):c.1174C>T (p.Pro392Ser) rs762406891
NM_000742.4(CHRNA2):c.1188G>A (p.Lys396=) rs1812566372
NM_000742.4(CHRNA2):c.1194C>T (p.Ser398=) rs1586389358
NM_000742.4(CHRNA2):c.1206C>T (p.His402=) rs2132651160
NM_000742.4(CHRNA2):c.1221C>T (p.Asn407=)
NM_000742.4(CHRNA2):c.122T>C (p.Leu41Pro) rs1812823370
NM_000742.4(CHRNA2):c.1230C>T (p.Ala410=)
NM_000742.4(CHRNA2):c.1239G>A (p.Arg413=)
NM_000742.4(CHRNA2):c.1245G>C (p.Val415=) rs373599393
NM_000742.4(CHRNA2):c.1248G>A (p.Val416=)
NM_000742.4(CHRNA2):c.1257G>A (p.Glu419=) rs2132650965
NM_000742.4(CHRNA2):c.1260G>A (p.Glu420=) rs1057522280
NM_000742.4(CHRNA2):c.1263C>T (p.Asp421=) rs2132650909
NM_000742.4(CHRNA2):c.1292C>T (p.Pro431Leu)
NM_000742.4(CHRNA2):c.1301G>A (p.Gly434Asp)
NM_000742.4(CHRNA2):c.1303A>G (p.Thr435Ala)
NM_000742.4(CHRNA2):c.1304C>T (p.Thr435Ile) rs1372280583
NM_000742.4(CHRNA2):c.1306C>T (p.Leu436Phe)
NM_000742.4(CHRNA2):c.132C>A (p.Pro44=) rs1397983639
NM_000742.4(CHRNA2):c.1330T>C (p.Ser444Pro) rs2132650571
NM_000742.4(CHRNA2):c.1332T>A (p.Ser444=)
NM_000742.4(CHRNA2):c.1346C>G (p.Pro449Arg)
NM_000742.4(CHRNA2):c.1364T>C (p.Leu455Pro) rs1812553075
NM_000742.4(CHRNA2):c.1365G>A (p.Leu455=) rs756635424
NM_000742.4(CHRNA2):c.1374T>G (p.Gly458=) rs976672656
NM_000742.4(CHRNA2):c.1378C>T (p.Leu460=) rs765948265
NM_000742.4(CHRNA2):c.1385T>C (p.Leu462Pro) rs377612702
NM_000742.4(CHRNA2):c.1393del (p.His465fs) rs1394301488
NM_000742.4(CHRNA2):c.1401G>A (p.Gln467=) rs765154757
NM_000742.4(CHRNA2):c.1410G>A (p.Leu470=) rs1586388697
NM_000742.4(CHRNA2):c.1441C>A (p.Arg481=)
NM_000742.4(CHRNA2):c.1464+12T>C
NM_000742.4(CHRNA2):c.1464+7T>G
NM_000742.4(CHRNA2):c.1465-6C>A
NM_000742.4(CHRNA2):c.1473G>A (p.Glu491=) rs1270908053
NM_000742.4(CHRNA2):c.1482G>A (p.Lys494=)
NM_000742.4(CHRNA2):c.149C>G (p.Pro50Arg) rs146763552
NM_000742.4(CHRNA2):c.149C>T (p.Pro50Leu) rs146763552
NM_000742.4(CHRNA2):c.150G>A (p.Pro50=) rs758848783
NM_000742.4(CHRNA2):c.150G>T (p.Pro50=) rs758848783
NM_000742.4(CHRNA2):c.1515C>T (p.Leu505=) rs2132646413
NM_000742.4(CHRNA2):c.1533C>G (p.Val511=)
NM_000742.4(CHRNA2):c.1539C>T (p.Phe513=)
NM_000742.4(CHRNA2):c.154G>A (p.Gly52Arg)
NM_000742.4(CHRNA2):c.1568C>A (p.Pro523Gln) rs145238683
NM_000742.4(CHRNA2):c.1568C>T (p.Pro523Leu) rs145238683
NM_000742.4(CHRNA2):c.15T>C (p.Cys5=)
NM_000742.4(CHRNA2):c.182G>C (p.Arg61Pro)
NM_000742.4(CHRNA2):c.198C>T (p.Leu66=) rs1812818583
NM_000742.4(CHRNA2):c.203G>A (p.Arg68Gln) rs548268816
NM_000742.4(CHRNA2):c.203G>C (p.Arg68Pro) rs548268816
NM_000742.4(CHRNA2):c.213C>T (p.Asn71=)
NM_000742.4(CHRNA2):c.214C>A (p.Arg72Ser)
NM_000742.4(CHRNA2):c.215G>A (p.Arg72His) rs201922955
NM_000742.4(CHRNA2):c.215G>C (p.Arg72Pro) rs201922955
NM_000742.4(CHRNA2):c.216C>T (p.Arg72=)
NM_000742.4(CHRNA2):c.220G>A (p.Ala74Thr)
NM_000742.4(CHRNA2):c.225C>A (p.Arg75=) rs371737919
NM_000742.4(CHRNA2):c.225C>T (p.Arg75=) rs371737919
NM_000742.4(CHRNA2):c.245A>G (p.Asp82Gly)
NM_000742.4(CHRNA2):c.24C>T (p.Phe8=) rs757567429
NM_000742.4(CHRNA2):c.288C>A (p.Ile96=) rs561008438
NM_000742.4(CHRNA2):c.288C>G (p.Ile96Met)
NM_000742.4(CHRNA2):c.294+10T>C rs2132666877
NM_000742.4(CHRNA2):c.294+19C>T
NM_000742.4(CHRNA2):c.295-19C>G
NM_000742.4(CHRNA2):c.295-5G>A
NM_000742.4(CHRNA2):c.295-8del
NM_000742.4(CHRNA2):c.295-9C>T rs2132666030
NM_000742.4(CHRNA2):c.321C>T (p.Thr107=) rs886044444
NM_000742.4(CHRNA2):c.327C>T (p.Val109=)
NM_000742.4(CHRNA2):c.332T>C (p.Leu111Pro)
NM_000742.4(CHRNA2):c.339+11C>T
NM_000742.4(CHRNA2):c.339+7G>A rs1370162616
NM_000742.4(CHRNA2):c.339+8C>G rs768490793
NM_000742.4(CHRNA2):c.340-11C>G
NM_000742.4(CHRNA2):c.340-18C>A
NM_000742.4(CHRNA2):c.340-9C>T rs1278613957
NM_000742.4(CHRNA2):c.348C>A (p.Ser116Arg) rs779790900
NM_000742.4(CHRNA2):c.348C>T (p.Ser116=) rs779790900
NM_000742.4(CHRNA2):c.360G>A (p.Leu120=) rs1586395599
NM_000742.4(CHRNA2):c.363C>G (p.Arg121=)
NM_000742.4(CHRNA2):c.368A>G (p.Asn123Ser) rs2132661449
NM_000742.4(CHRNA2):c.372C>G (p.Pro124=)
NM_000742.4(CHRNA2):c.372_373inv (p.Thr125Ala)
NM_000742.4(CHRNA2):c.375T>C (p.Thr125=)
NM_000742.4(CHRNA2):c.411T>A (p.Ser137=)
NM_000742.4(CHRNA2):c.444C>T (p.Tyr148=)
NM_000742.4(CHRNA2):c.449+16G>T
NM_000742.4(CHRNA2):c.449+2T>C rs2132661149
NM_000742.4(CHRNA2):c.449+9C>G rs368584036
NM_000742.4(CHRNA2):c.450-15C>A
NM_000742.4(CHRNA2):c.450-9T>A rs1812619727
NM_000742.4(CHRNA2):c.459G>A (p.Gly153=) rs1586391704
NM_000742.4(CHRNA2):c.48G>A (p.Leu16=) rs2132670415
NM_000742.4(CHRNA2):c.504G>C (p.Thr168=) rs1247001566
NM_000742.4(CHRNA2):c.516C>A (p.His172Gln) rs1563319114
NM_000742.4(CHRNA2):c.51G>T (p.Trp17Cys)
NM_000742.4(CHRNA2):c.543C>T (p.Ser181=)
NM_000742.4(CHRNA2):c.559G>A (p.Val187Ile)
NM_000742.4(CHRNA2):c.564C>T (p.Thr188=)
NM_000742.4(CHRNA2):c.618T>C (p.Tyr206=)
NM_000742.4(CHRNA2):c.621C>T (p.Asp207=) rs2132654000
NM_000742.4(CHRNA2):c.633C>T (p.Ile211=)
NM_000742.4(CHRNA2):c.643C>A (p.Gln215Lys) rs1812608078
NM_000742.4(CHRNA2):c.646A>G (p.Met216Val) rs1812607837
NM_000742.4(CHRNA2):c.694G>A (p.Ala232Thr) rs1226134787
NM_000742.4(CHRNA2):c.695C>A (p.Ala232Asp) rs933808461
NM_000742.4(CHRNA2):c.699C>A (p.Ile233=)
NM_000742.4(CHRNA2):c.699C>T (p.Ile233=) rs1321895505
NM_000742.4(CHRNA2):c.6C>A (p.Gly2=)
NM_000742.4(CHRNA2):c.711G>A (p.Thr237=)
NM_000742.4(CHRNA2):c.723C>T (p.Asn241=) rs1060504822
NM_000742.4(CHRNA2):c.747C>G (p.Ala249=) rs1040149262
NM_000742.4(CHRNA2):c.747C>T (p.Ala249=)
NM_000742.4(CHRNA2):c.78A>C (p.Gly26=)
NM_000742.4(CHRNA2):c.82G>C (p.Glu28Gln) rs1812825772
NM_000742.4(CHRNA2):c.865C>T (p.Leu289=) rs2132652883
NM_000742.4(CHRNA2):c.894G>C (p.Thr298=)
NM_000742.4(CHRNA2):c.906G>T (p.Ser302=) rs151068685
NM_000742.4(CHRNA2):c.910C>T (p.Leu304=)
NM_000742.4(CHRNA2):c.915G>A (p.Leu305=)
NM_000742.4(CHRNA2):c.918A>T (p.Ser306=) rs908715626
NM_000742.4(CHRNA2):c.924C>G (p.Thr308=)
NM_000742.4(CHRNA2):c.936G>C (p.Leu312=) rs1319128623
NM_000742.4(CHRNA2):c.966G>C (p.Ser322=) rs140118184
NM_000742.4(CHRNA2):c.978G>A (p.Pro326=)
NM_000742.4(CHRNA2):c.981C>T (p.Leu327=)
NM_000742.4(CHRNA2):c.98C>G (p.Pro33Arg)

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