ClinVar Miner

List of variants in gene GPC3 reported as benign for embryonal neoplasm

Included ClinVar conditions (54):
Minimum submission review status: Collection method:
Minimum conflict level:
Gene type:
ClinVar version:
Total variants: 69
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HGVS dbSNP gnomAD frequency
NM_004484.4(GPC3):c.1292+9706A>G rs2205704 0.35691
NM_004484.4(GPC3):c.1500T>C (p.Asp500=) rs2314298 0.06746
NM_004484.4(GPC3):c.1626A>G (p.Ala542=) rs61754631 0.05751
NM_004484.4(GPC3):c.204G>A (p.Lys68=) rs61754632 0.01163
NM_004484.4(GPC3):c.1285G>A (p.Val429Met) rs11539789 0.00333
NM_004484.4(GPC3):c.1167-8T>C rs182950534 0.00303
NM_004484.4(GPC3):c.826G>A (p.Gly276Ser) rs141100113 0.00082
NM_004484.4(GPC3):c.1032+9C>T rs200782847 0.00069
NM_004484.4(GPC3):c.995A>G (p.Gln332Arg) rs78696048 0.00065
NM_004484.4(GPC3):c.359G>A (p.Arg120His) rs148021273 0.00052
NM_004484.4(GPC3):c.660C>T (p.Ser220=) rs138450923 0.00050
NM_004484.4(GPC3):c.1254C>T (p.Asn418=) rs150766741 0.00032
NM_004484.4(GPC3):c.876T>C (p.Ile292=) rs61754633 0.00024
NM_004484.4(GPC3):c.889A>G (p.Arg297Gly) rs148951753 0.00019
NM_004484.4(GPC3):c.172C>T (p.Pro58Ser) rs147231796 0.00014
NM_004484.4(GPC3):c.676A>G (p.Thr226Ala) rs145141525 0.00014
NM_004484.4(GPC3):c.1033-18T>C rs368015595 0.00013
NM_004484.4(GPC3):c.1631C>T (p.Pro544Leu) rs375606908 0.00011
NM_004484.4(GPC3):c.1232G>T (p.Ser411Ile) rs139206747 0.00010
NM_004484.4(GPC3):c.1680C>T (p.Ser560=) rs748480657 0.00008
NM_004484.4(GPC3):c.1716G>C (p.Val572=) rs779688123 0.00008
NM_004484.4(GPC3):c.1149C>T (p.Thr383=) rs147245792 0.00007
NM_004484.4(GPC3):c.1287G>A (p.Val429=) rs756598026 0.00006
NM_004484.4(GPC3):c.358C>T (p.Arg120Cys) rs587778392 0.00006
NM_004484.4(GPC3):c.825C>T (p.Gly275=) rs753811089 0.00006
NM_004484.4(GPC3):c.168C>G (p.Pro56=) rs188592483 0.00005
NM_004484.4(GPC3):c.459T>G (p.Ser153=) rs775459305 0.00005
NM_004484.4(GPC3):c.1160G>A (p.Arg387Gln) rs145280221 0.00004
NM_004484.4(GPC3):c.1632G>A (p.Pro544=) rs766482434 0.00004
NM_004484.4(GPC3):c.394A>G (p.Asn132Asp) rs143561452 0.00004
NM_004484.4(GPC3):c.648G>C (p.Met216Ile) rs752516966 0.00004
NM_004484.4(GPC3):c.972T>C (p.Phe324=) rs183678432 0.00004
NM_004484.4(GPC3):c.1398G>A (p.Leu466=) rs745968470 0.00003
NM_004484.4(GPC3):c.1426A>G (p.Met476Val) rs200265913 0.00003
NM_004484.4(GPC3):c.1573+20C>T rs368998078 0.00003
NM_004484.4(GPC3):c.1616G>C (p.Ser539Thr) rs137858712 0.00003
NM_004484.4(GPC3):c.175+9G>A rs776234359 0.00003
NM_004484.4(GPC3):c.365C>T (p.Ala122Val) rs779679730 0.00003
NM_004484.4(GPC3):c.1002C>T (p.Val334=) rs747775536 0.00002
NM_004484.4(GPC3):c.1068A>G (p.Gln356=) rs372212269 0.00002
NM_004484.4(GPC3):c.1131T>C (p.His377=) rs367679653 0.00002
NM_004484.4(GPC3):c.1332G>A (p.Gln444=) rs771847990 0.00002
NM_004484.4(GPC3):c.485A>G (p.Asn162Ser) rs780431445 0.00002
NM_004484.4(GPC3):c.693G>A (p.Gln231=) rs768782219 0.00002
NM_004484.4(GPC3):c.897C>T (p.Tyr299=) rs200421668 0.00002
NM_004484.4(GPC3):c.1063C>T (p.Arg355Cys) rs745700691 0.00001
NM_004484.4(GPC3):c.1162A>G (p.Arg388Gly) rs199812705 0.00001
NM_004484.4(GPC3):c.1248G>A (p.Ala416=) rs201677091 0.00001
NM_004484.4(GPC3):c.1275A>G (p.Gly425=) rs749258552 0.00001
NM_004484.4(GPC3):c.1318G>A (p.Gly440Arg) rs1203009272 0.00001
NM_004484.4(GPC3):c.1641C>T (p.Asn547=) rs772217919 0.00001
NM_004484.4(GPC3):c.1683G>A (p.Pro561=) rs1302862383 0.00001
NM_004484.4(GPC3):c.171G>A (p.Val57=) rs398124166 0.00001
NM_004484.4(GPC3):c.327G>A (p.Ala109=) rs1466168469 0.00001
NM_004484.4(GPC3):c.384C>T (p.Ala128=) rs761541528 0.00001
NM_004484.4(GPC3):c.392A>G (p.Lys131Arg) rs751302717 0.00001
NM_004484.4(GPC3):c.584A>G (p.Asn195Ser) rs745317547 0.00001
NM_004484.4(GPC3):c.844A>G (p.Met282Val) rs151082475 0.00001
NM_004484.4(GPC3):c.924T>A (p.Asn308Lys) rs368928269 0.00001
NM_004484.4(GPC3):c.1029C>T (p.Thr343=) rs890143711
NM_004484.4(GPC3):c.1167-3del rs2124430989
NM_004484.4(GPC3):c.1236T>C (p.His412=)
NM_004484.4(GPC3):c.1574-11T>C
NM_004484.4(GPC3):c.1574-7_1574-4del rs751413609
NM_004484.4(GPC3):c.251C>T (p.Thr84Ile) rs2076400566
NM_004484.4(GPC3):c.326C>T (p.Ala109Val) rs761660909
NM_004484.4(GPC3):c.338-20dup rs370737647
NM_004484.4(GPC3):c.338-5del rs370737647
NM_004484.4(GPC3):c.79CCG[6] (p.Pro31dup) rs749104500

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