ClinVar Miner

List of variants reported as association for cardiovascular organ benign neoplasm by Yale Center for Mendelian Genomics, Yale University

Included ClinVar conditions (47):

Adrenocortical carcinoma, hereditary; Familial cancer of breast; Glioma susceptibility 1; Bone osteosarcoma; Li-Fraumeni syndrome 1; Nasopharyngeal carcinoma; Carcinoma of pancreas; Choroid plexus papilloma; Basal cell carcinoma, susceptibility to, 7; Hepatocellular carcinoma; Colorectal cancer; Bone marrow failure syndrome 5
Adrenocortical carcinoma, hereditary; Familial cancer of breast; Glioma susceptibility 1; Bone osteosarcoma; Li-Fraumeni syndrome 1; Nasopharyngeal carcinoma; Carcinoma of pancreas; Choroid plexus papilloma; Carcinoma of colon; Basal cell carcinoma, susceptibility to, 7; Hepatocellular carcinoma
Adrenocortical carcinoma, hereditary; Glioma susceptibility 1; Li-Fraumeni syndrome 1; Choroid plexus papilloma; Basal cell carcinoma, susceptibility to, 7; Colorectal cancer; Bone marrow failure syndrome 5
Aplastic anemia; Atrial septal defect; Pulmonary arterial hypertension; Hypotelorism; Hemangioma; Hepatomegaly; Abnormal pinna morphology; Downslanted palpebral fissures; Wide anterior fontanel; Low-set, posteriorly rotated ears; Dry skin; Relative macrocephaly; Lateral ventricle dilatation; Intracerebral periventricular calcifications; Aplasia of the ovary; Erythroid hypoplasia; Vaginal hydrocele
Arteriovenous malformation
Autistic behavior; Hemangioma; Eczema; Macrotia; Arachnodactyly; High forehead; Intellectual disability, mild; Sandal gap; Mild global developmental delay; Narrow nasal base
Blepharophimosis; Ptosis; Hemangioma; Abnormal facial shape
Capillary hemangioma
Capillary infantile hemangioma
Capillary infantile hemangioma; Hereditary lymphedema type I; Congenital heart defects, multiple types, 7
Cavernous hemangioma
Cerebellar hemangioblastoma; Pancreatic cysts; Retinal capillary hemangioma; Spinal hemangioblastoma
Cerebral arteriovenous malformation
Cerebral arteriovenous malformation; Seizure; Hemiparesis; Cavernous hemangioma
Cerebral arteriovenous malformation; Tremor; Hand tremor; Arteriovenous malformation
Cerebrofacial arteriovenous metameric syndrome
Choroid plexus carcinoma
Choroid plexus papilloma
Cystic hygroma
Epicanthus; Atrial septal defect; Inguinal hernia; Hydronephrosis; Hirsutism; Large earlobe; Abnormal facial shape; Short nose; Single transverse palmar crease; Synophrys; Thin vermilion border; Micropenis; Horseshoe kidney; Entropion; Reduced tendon reflexes; Umbilical hernia; Abnormality of the nail; Mitral regurgitation; Aortic regurgitation; Capillary hemangioma; 2-3 toe cutaneous syndactyly; Hypotonia; Patent ductus arteriosus
Familial cancer of breast; Hereditary diffuse gastric adenocarcinoma; Lung carcinoma; Noonan syndrome 3; Linear nevus sebaceous syndrome; Cerebral arteriovenous malformation; Malignant tumor of urinary bladder; Carcinoma of pancreas; Autoimmune lymphoproliferative syndrome type 4; Acute myeloid leukemia; Cardiofaciocutaneous syndrome 2
Familial cancer of breast; Noonan syndrome 3; Linear nevus sebaceous syndrome; Toriello-Lacassie-Droste syndrome; Cerebral arteriovenous malformation; Malignant tumor of urinary bladder; Carcinoma of pancreas; Autoimmune lymphoproliferative syndrome type 4; Acute myeloid leukemia; Cardiofaciocutaneous syndrome 2; Gastric cancer; Lung cancer
Fetal cystic hygroma
Global developmental delay; Polymicrogyria; Macrocephaly; Capillary hemangioma
Global developmental delay; Posteriorly rotated ears; Anemia; Tapered finger; Hemangioma; Clinodactyly of the 5th finger; Delayed speech and language development; Abnormality of the dentition; Macrocephaly; Bruising susceptibility; Gastroesophageal reflux; Allergy; Heart murmur; Hypotonia; Asthma
Gorham-Stout disease
Hemangioma
Hemangioma; Macrocephaly; Prominent occiput; 3-5 finger syndactyly; Prominent forehead; Severe global developmental delay; Hypotonia
Hepatic hemangioma
Kaposiform hemangioendothelioma; Congenital tufted angioma; Pyogenic granuloma
Low-set ears; Hemangioma; Generalized hypotonia
Lymphangioma
Lymphedema-posterior choanal atresia syndrome
Pectus excavatum; Global developmental delay; Hemangioma; Synophrys; Narrow mouth; Dolichocephaly; Long eyelashes; Joint hypermobility; Frontal upsweep of hair; Narrow naris; Sydney crease; Hypotonia
Polycystic kidney disease; Hemangioma; Enlarged kidney
Primary intraosseous venous malformation
Pyogenic granuloma
Seizure; Cardiac rhabdomyoma; Hamartoma
Seizure; Hemangioma; Facial hemangioma
Seizure; Inguinal hernia; Hemangioma; Nephrocalcinosis; Stroke disorder
Skin hemangioma
Torticollis; Global developmental delay; Short stature; Dysphagia; Premature birth; Generalized hypotonia; Joint hypermobility; Relative macrocephaly; Capillary hemangioma; Congenital talipes calcaneovalgus
Tufted angioma of skin
Vein of Galen aneurysmal malformation
Venous malformation
Verrucous hemangioma
Von Hippel-Lindau syndrome; Cerebellar hemangioblastoma; Papillary renal cell carcinoma type 1; Skin adenoma

Minimum submission review status:		Collection method:
Minimum conflict level: Report conflict between different conditions
Show significances as they were submitted (without aggregation into standard terms)
		ClinVar version:

Total variants: 9

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HGVS	dbSNP	gnomAD frequency
NM_001146079.2(CLDN14):c.427G>A (p.Val143Met)	rs776564488	0.00004
NM_000420.3(KEL):c.604G>A (p.Gly202Ser)	rs2116680039
NM_000420.3(KEL):c.961C>T (p.Gln321Ter)	rs980885552
NM_001146079.2(CLDN14):c.337G>C (p.Ala113Pro)	rs138631461
NM_003070.5(SMARCA2):c.2564G>T (p.Arg855Leu)	rs1471482709
NM_003482.4(KMT2D):c.15689G>A (p.Cys5230Tyr)	rs2137715091
NM_004444.5(EPHB4):c.1295_1296del (p.Glu432fs)	rs2116449991
NM_004444.5(EPHB4):c.1526C>G (p.Ala509Gly)	rs146937374
NM_006766.5(KAT6A):c.1433C>T (p.Thr478Ile)	rs1554688023

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