ClinVar Miner

List of variants in gene LAMA2 reported as benign for hereditary skeletal muscle disorder

Included ClinVar conditions (591):
Minimum submission review status: Collection method:
Minimum conflict level:
Gene type:
ClinVar version:
Total variants: 151
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HGVS dbSNP gnomAD frequency
NM_000426.4(LAMA2):c.381C>A (p.Thr127=) rs4404787 0.95273
NM_000426.4(LAMA2):c.7830G>C (p.Val2610=) rs2229849 0.63028
NM_000426.4(LAMA2):c.7760C>T (p.Ala2587Val) rs2229848 0.62946
NM_000426.4(LAMA2):c.2537+3764A>G rs902370 0.56800
NM_000426.4(LAMA2):c.5466A>G (p.Glu1822=) rs3749877 0.50817
NM_000426.4(LAMA2):c.5502G>A (p.Glu1834=) rs3749878 0.50693
NM_000426.4(LAMA2):c.5727-24T>A rs3828735 0.50074
NM_000426.4(LAMA2):c.5727-22C>T rs80125253 0.50051
NM_000426.4(LAMA2):c.5727-21T>G rs76902576 0.50019
NM_000426.4(LAMA2):c.7760= (p.Ala2587=) rs2229848 0.37054
NM_000426.4(LAMA2):c.7845G>A (p.Pro2615=) rs2229850 0.35164
NM_000426.4(LAMA2):c.3174+38A>G rs902373 0.33937
NM_000426.4(LAMA2):c.2799A>G (p.Gln933=) rs1027199 0.26612
NM_000426.4(LAMA2):c.1856G>A (p.Arg619His) rs3816665 0.25723
NM_000426.4(LAMA2):c.3411+13G>A rs3798663 0.25503
NM_000426.4(LAMA2):c.3412G>A (p.Val1138Met) rs2306942 0.09135
NM_000426.4(LAMA2):c.7906A>G (p.Thr2636Ala) rs2244008 0.08650
NM_000426.4(LAMA2):c.156C>T (p.Ile52=) rs1140366 0.08370
NM_000426.4(LAMA2):c.4523+19C>T rs17057158 0.08168
NM_000426.4(LAMA2):c.4956C>G (p.Thr1652=) rs17057184 0.07998
NM_000426.4(LAMA2):c.6274+4C>T rs73775410 0.02805
NM_000426.4(LAMA2):c.5071+18A>G rs73591259 0.02430
NM_000426.4(LAMA2):c.8028T>C (p.Asn2676=) rs35313209 0.02285
NM_000426.4(LAMA2):c.8528A>G (p.Asn2843Ser) rs73599293 0.02196
NM_000426.4(LAMA2):c.1533T>C (p.Asn511=) rs9492266 0.02106
NM_000426.4(LAMA2):c.4750G>A (p.Gly1584Ser) rs117781224 0.01941
NM_000426.4(LAMA2):c.1491T>C (p.Cys497=) rs2306220 0.01733
NM_000426.4(LAMA2):c.8124T>A (p.Gly2708=) rs34997144 0.01727
NM_000426.4(LAMA2):c.8691A>G (p.Arg2897=) rs2228599 0.01648
NM_000426.4(LAMA2):c.3613A>G (p.Thr1205Ala) rs35889149 0.01262
NM_000426.4(LAMA2):c.1798G>A (p.Gly600Arg) rs36044314 0.01250
NM_000426.4(LAMA2):c.1206+11C>T rs115007959 0.00915
NM_000426.4(LAMA2):c.7431A>T (p.Arg2477Ser) rs34367843 0.00914
NM_000426.4(LAMA2):c.1930C>G (p.His644Asp) rs35879899 0.00899
NM_000426.4(LAMA2):c.8548-10T>C rs113644365 0.00865
NM_000426.4(LAMA2):c.9123C>T (p.Val3041=) rs61749497 0.00858
NM_000426.4(LAMA2):c.1403C>G (p.Ala468Gly) rs111695726 0.00720
NM_000426.4(LAMA2):c.1701C>T (p.Ile567=) rs111381107 0.00641
NM_000426.4(LAMA2):c.8774C>T (p.Pro2925Leu) rs77113162 0.00635
NM_000426.4(LAMA2):c.4437-5T>A rs41285288 0.00557
NM_000426.4(LAMA2):c.2476C>T (p.Arg826Trp) rs118147866 0.00549
NM_000426.4(LAMA2):c.4470C>T (p.Asp1490=) rs35089085 0.00547
NM_000426.4(LAMA2):c.2097-13T>C rs139246515 0.00415
NM_000426.4(LAMA2):c.3556-15T>G rs17741922 0.00414
NM_000426.4(LAMA2):c.8982T>C (p.Asp2994=) rs79374915 0.00344
NM_000426.4(LAMA2):c.4487C>T (p.Ala1496Val) rs147077184 0.00338
NM_000426.4(LAMA2):c.5909G>C (p.Cys1970Ser) rs148451013 0.00314
NM_000426.4(LAMA2):c.4935C>A (p.Thr1645=) rs35579821 0.00306
NM_000426.4(LAMA2):c.6788C>T (p.Thr2263Met) rs56209257 0.00301
NM_000426.4(LAMA2):c.675C>T (p.Ala225=) rs139665175 0.00298
NM_000426.4(LAMA2):c.5247C>T (p.Ala1749=) rs149951387 0.00271
NM_000426.4(LAMA2):c.6429+8C>A rs199773264 0.00238
NM_000426.4(LAMA2):c.411G>A (p.Ala137=) rs149347601 0.00206
NM_000426.4(LAMA2):c.2430A>C (p.Pro810=) rs147572139 0.00185
NM_000426.4(LAMA2):c.1621A>G (p.Ser541Gly) rs141363186 0.00175
NM_000426.4(LAMA2):c.2462C>T (p.Thr821Met) rs117422805 0.00173
NM_000426.4(LAMA2):c.6279C>T (p.Ala2093=) rs141190803 0.00173
NM_000426.4(LAMA2):c.8075+20A>G rs139684979 0.00158
NM_000426.4(LAMA2):c.1782+14T>C rs191215452 0.00147
NM_000426.4(LAMA2):c.74C>T (p.Pro25Leu) rs145310035 0.00147
NM_000426.4(LAMA2):c.4960-16G>A rs9483026 0.00133
NM_000426.4(LAMA2):c.2323-19A>T rs139093294 0.00128
NM_000426.4(LAMA2):c.2856+13G>A rs149487202 0.00121
NM_000426.4(LAMA2):c.1650C>T (p.Gly550=) rs899353 0.00120
NM_000426.4(LAMA2):c.4349G>A (p.Arg1450Gln) rs148905630 0.00099
NM_000426.4(LAMA2):c.397-15G>A rs188045427 0.00098
NM_000426.4(LAMA2):c.1028-4G>A rs199943893 0.00093
NM_000426.4(LAMA2):c.6649G>A (p.Val2217Ile) rs147857398 0.00093
NM_000426.4(LAMA2):c.922G>A (p.Glu308Lys) rs146462599 0.00086
NM_000426.4(LAMA2):c.1771C>T (p.Leu591=) rs142965498 0.00082
NM_000426.4(LAMA2):c.2323-18T>A rs199846930 0.00081
NM_000426.4(LAMA2):c.2187G>C (p.Gly729=) rs142345851 0.00077
NM_000426.4(LAMA2):c.7965C>A (p.Ile2655=) rs141101234 0.00067
NM_000426.4(LAMA2):c.2115T>G (p.Leu705=) rs149753273 0.00065
NM_000426.4(LAMA2):c.5121C>T (p.Asp1707=) rs151199929 0.00064
NM_000426.4(LAMA2):c.5866-20A>G rs372028707 0.00055
NM_000426.4(LAMA2):c.4312-16C>T rs201204005 0.00047
NM_000426.4(LAMA2):c.2217G>T (p.Trp739Cys) rs192317605 0.00039
NM_000426.4(LAMA2):c.3665A>G (p.Asp1222Gly) rs368240215 0.00030
NM_000426.4(LAMA2):c.4205G>A (p.Arg1402His) rs144830879 0.00024
NM_000426.4(LAMA2):c.902C>T (p.Ala301Val) rs144053918 0.00023
NM_000426.4(LAMA2):c.5405G>T (p.Arg1802Leu) rs141235562 0.00022
NM_000426.4(LAMA2):c.3213A>G (p.Gln1071=) rs372938168 0.00021
NM_000426.4(LAMA2):c.2304C>T (p.Asp768=) rs142126511 0.00020
NM_000426.4(LAMA2):c.8988+15T>C rs201041465 0.00020
NM_000426.4(LAMA2):c.7057C>T (p.Arg2353Cys) rs145885540 0.00016
NM_000426.4(LAMA2):c.7452-4A>C rs770296949 0.00016
NM_000426.4(LAMA2):c.8644G>A (p.Val2882Met) rs138024644 0.00016
NM_000426.4(LAMA2):c.1873A>G (p.Ile625Val) rs141658354 0.00014
NM_000426.4(LAMA2):c.542A>G (p.Asn181Ser) rs143664472 0.00014
NM_000426.4(LAMA2):c.8011C>A (p.Pro2671Thr) rs780695627 0.00014
NM_000426.4(LAMA2):c.3429C>A (p.Ile1143=) rs200646230 0.00013
NM_000426.4(LAMA2):c.1816A>G (p.Ile606Val) rs113022759 0.00012
NM_000426.4(LAMA2):c.6322C>T (p.Arg2108Trp) rs139824017 0.00012
NM_000426.4(LAMA2):c.3597T>C (p.Asp1199=) rs199904029 0.00011
NM_000426.4(LAMA2):c.6666G>A (p.Leu2222=) rs772358536 0.00011
NM_000426.4(LAMA2):c.2240G>C (p.Gly747Ala) rs139843107 0.00010
NM_000426.4(LAMA2):c.2767G>A (p.Gly923Ser) rs144492513 0.00010
NM_000426.4(LAMA2):c.3666C>A (p.Asp1222Glu) rs373992160 0.00010
NM_000426.4(LAMA2):c.5470G>A (p.Gly1824Ser) rs370150883 0.00010
NM_000426.4(LAMA2):c.1468-19T>C rs200241408 0.00008
NM_000426.4(LAMA2):c.2513G>A (p.Gly838Glu) rs779877337 0.00008
NM_000426.4(LAMA2):c.4436+18A>G rs184907128 0.00008
NM_000426.4(LAMA2):c.4803G>A (p.Pro1601=) rs766521929 0.00007
NM_000426.4(LAMA2):c.4301C>T (p.Ser1434Leu) rs368379507 0.00006
NM_000426.4(LAMA2):c.7344T>C (p.Asn2448=) rs199931560 0.00006
NM_000426.4(LAMA2):c.1586G>A (p.Ser529Asn) rs370691060 0.00005
NM_000426.4(LAMA2):c.5969-4G>A rs566302197 0.00005
NM_000426.4(LAMA2):c.5280G>A (p.Glu1760=) rs376693904 0.00004
NM_000426.4(LAMA2):c.8075+16C>T rs776913896 0.00004
NM_000426.4(LAMA2):c.4772A>G (p.Gln1591Arg) rs143986011 0.00003
NM_000426.4(LAMA2):c.5382A>G (p.Thr1794=) rs565429072 0.00003
NM_000426.4(LAMA2):c.5688C>T (p.His1896=) rs573779258 0.00003
NM_000426.4(LAMA2):c.5072-10C>A rs552989582 0.00002
NM_000426.4(LAMA2):c.1609-8dup
NM_000426.4(LAMA2):c.1850C>G (p.Thr617Arg)
NM_000426.4(LAMA2):c.1850C>T (p.Thr617Ile)
NM_000426.4(LAMA2):c.1855C>T (p.Arg619Cys)
NM_000426.4(LAMA2):c.1885-11del
NM_000426.4(LAMA2):c.1885-11dup rs758433204
NM_000426.4(LAMA2):c.1885-6del
NM_000426.4(LAMA2):c.2097-13dup
NM_000426.4(LAMA2):c.2322+20G>A
NM_000426.4(LAMA2):c.2451-18G>T rs142989915
NM_000426.4(LAMA2):c.2756G>T (p.Arg919Leu) rs35277491
NM_000426.4(LAMA2):c.2857-14T>A rs535718824
NM_000426.4(LAMA2):c.3174+19del
NM_000426.4(LAMA2):c.3296A>G (p.Asn1099Ser) rs35065563
NM_000426.4(LAMA2):c.3556-7del rs762614739
NM_000426.4(LAMA2):c.3736-16_3736-14del rs538587087
NM_000426.4(LAMA2):c.3925-6T>A rs372612467
NM_000426.4(LAMA2):c.396+19del
NM_000426.4(LAMA2):c.396+19dup rs766668370
NM_000426.4(LAMA2):c.396+8T>A rs764464282
NM_000426.4(LAMA2):c.4312-10del
NM_000426.4(LAMA2):c.4993G>C (p.Gly1665Arg)
NM_000426.4(LAMA2):c.5072-6del rs398123376
NM_000426.4(LAMA2):c.5074G>C (p.Val1692Leu) rs567613582
NM_000426.4(LAMA2):c.5140T>C (p.Leu1714=) rs572008421
NM_000426.4(LAMA2):c.5327T>C (p.Leu1776Pro)
NM_000426.4(LAMA2):c.5445+14dup
NM_000426.4(LAMA2):c.5530C>A (p.Arg1844Ser) rs56173620
NM_000426.4(LAMA2):c.640-13del
NM_000426.4(LAMA2):c.640-18A>G
NM_000426.4(LAMA2):c.6430-5del
NM_000426.4(LAMA2):c.6430-5dup rs550488535
NM_000426.4(LAMA2):c.7754A>G (p.Tyr2585Cys)
NM_000426.4(LAMA2):c.7767C>T (p.Leu2589=)
NM_000426.4(LAMA2):c.8638G>A (p.Asp2880Asn)
NM_000426.4(LAMA2):c.9212-15C>A rs55776770
NM_000426.4(LAMA2):c.9212-4dup

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