List of variants reported as benign for autoimmune disease by Genome-Nilou Lab

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Total variants: 26

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HGVS	dbSNP	gnomAD frequency
NM_000639.3(FASLG):c.452-28T>C	rs2639653	0.99043
NM_006254.4(PRKCD):c.1857T>C (p.Pro619=)	rs900495	0.94337
NM_006254.4(PRKCD):c.1782C>G (p.Thr594=)	rs1075865	0.93819
NM_015474.4(SAMHD1):c.208+158A>G	rs6030389	0.90232
NM_006254.4(PRKCD):c.1441C>T (p.Leu481=)	rs2306574	0.75510
NM_006254.4(PRKCD):c.1743+29T>G	rs7630600	0.74353
NM_002296.4(LBR):c.461G>A (p.Ser154Asn)	rs2230419	0.72194
NM_000043.6(FAS):c.642T>C (p.Thr214=)	rs2234978	0.72086
NM_002296.4(LBR):c.117G>A (p.Val39=)	rs1056607	0.71598
NM_002296.4(LBR):c.261T>C (p.Pro87=)	rs1056608	0.68333
NM_139276.3(STAT3):c.1233+43C>G	rs2293152	0.66160
NM_006254.4(PRKCD):c.115+21C>G	rs2306571	0.65337
NM_000383.4(AIRE):c.995+109A>G	rs1078480	0.49492
NM_000383.4(AIRE):c.1578T>C (p.Asp526=)	rs1133779	0.49415
NM_032977.4(CASP10):c.177A>G (p.Ser59=)	rs3900115	0.49172
NM_015474.4(SAMHD1):c.276-105C>A	rs6030312	0.44115
NM_032977.4(CASP10):c.1564T>A (p.Leu522Ile)	rs13006529	0.42733
NM_000383.4(AIRE):c.1197T>C (p.Ala399=)	rs1800521	0.39834
NM_000383.4(AIRE):c.1096-288G>A	rs933150	0.30258
NM_006254.4(PRKCD):c.1119G>A (p.Glu373=)	rs2230494	0.29106
NM_000383.4(AIRE):c.681C>T (p.Gly227=)	rs1055311	0.21613
NM_000383.4(AIRE):c.588C>T (p.Ser196=)	rs878081	0.18544
NM_000383.4(AIRE):c.1095+6G>A	rs1800525	0.10544
NM_007315.4(STAT1):c.1713T>G (p.Pro571=)	rs772114461	0.00003
NM_000383.4(AIRE):c.834C>G (p.Ser278Arg)	rs1800520
NM_139276.3(STAT3):c.1601-10dup	rs3830585

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