ClinVar Miner

List of variants reported as likely benign for abnormal mineralization disorder by Illumina Laboratory Services, Illumina

Included ClinVar conditions (28):
Minimum submission review status: Collection method:
Minimum conflict level:
ClinVar version:
Total variants: 87
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HGVS dbSNP gnomAD frequency
NM_000376.3(VDR):c.*437C>G rs11574119 0.03464
NM_000376.3(VDR):c.*562A>C rs3858733 0.03190
NM_000376.3(VDR):c.*2974A>T rs11574139 0.03175
NM_006208.3(ENPP1):c.2320C>T (p.Arg774Cys) rs28933977 0.02826
NM_006208.3(ENPP1):c.-10C>T rs750410843 0.02463
NM_000376.3(VDR):c.*1281G>A rs7967673 0.02377
NM_000376.3(VDR):c.*1242A>G rs7954412 0.02375
NM_000376.3(VDR):c.*2827A>G rs11574138 0.02365
NM_000785.4(CYP27B1):c.942G>A (p.Leu314=) rs8176345 0.02124
NM_000376.3(VDR):c.*408T>C rs112308011 0.01929
NM_024529.5(CDC73):c.*1267A>G rs78218016 0.01764
NM_000376.3(VDR):c.*2593A>G rs11168263 0.01497
NM_006208.3(ENPP1):c.2002G>A (p.Glu668Lys) rs115371819 0.01496
NM_000376.3(VDR):c.*409G>A rs11574118 0.01495
NM_000785.4(CYP27B1):c.*415G>A rs8176351 0.01487
NM_006208.3(ENPP1):c.1831C>G (p.Leu611Val) rs79079368 0.01455
NM_024529.5(CDC73):c.*580A>T rs191600804 0.01264
NM_006208.3(ENPP1):c.*2076C>T rs117531639 0.01090
NM_000388.4(CASR):c.2610G>A (p.Glu870=) rs143738711 0.01002
NM_000444.6(PHEX):c.537T>A (p.Val179=) rs137961493 0.00746
NM_020638.3(FGF23):c.*388G>A rs13312795 0.00731
NM_000376.3(VDR):c.444C>T (p.Ser148=) rs2229828 0.00638
NM_006208.3(ENPP1):c.*1122A>G rs148507889 0.00539
NM_006208.3(ENPP1):c.*3176T>A rs114333444 0.00525
NM_024529.5(CDC73):c.1185A>G (p.Gln395=) rs116358657 0.00511
NM_006208.3(ENPP1):c.*1038T>A rs79214335 0.00496
NM_024529.5(CDC73):c.*2304T>G rs144363422 0.00424
NM_006208.3(ENPP1):c.2657G>C (p.Arg886Thr) rs8192683 0.00299
NM_024529.5(CDC73):c.*2085G>C rs150030810 0.00217
NM_024529.5(CDC73):c.*12C>A rs193025205 0.00196
NM_024529.5(CDC73):c.*518A>G rs190433473 0.00195
NM_004407.4(DMP1):c.639G>A (p.Glu213=) rs116732769 0.00193
NM_006208.3(ENPP1):c.2757A>T (p.Pro919=) rs73541508 0.00178
NM_000388.4(CASR):c.748G>A (p.Glu250Lys) rs62269092 0.00163
NM_006208.3(ENPP1):c.*3528C>T rs557822175 0.00161
NM_000785.4(CYP27B1):c.*77G>A rs8176350 0.00137
NM_024529.5(CDC73):c.-95G>A rs143969598 0.00133
NM_006208.3(ENPP1):c.*1307T>G rs189263683 0.00117
NM_006208.3(ENPP1):c.*4015G>A rs531152298 0.00116
NM_006208.3(ENPP1):c.*804A>G rs114078048 0.00098
NM_024529.5(CDC73):c.33C>T (p.Tyr11=) rs150951102 0.00094
NM_000388.4(CASR):c.1631G>A (p.Arg544Gln) rs115230894 0.00086
NM_004407.4(DMP1):c.724T>C (p.Ser242Pro) rs147552663 0.00080
NM_000388.4(CASR):c.1285C>T (p.His429Tyr) rs142818334 0.00073
NM_024529.5(CDC73):c.*3524A>G rs548190260 0.00071
NM_024529.5(CDC73):c.1032T>G (p.Val344=) rs148612206 0.00070
NM_000388.4(CASR):c.915C>A (p.Ile305=) rs200528343 0.00051
NM_054027.6(ANKH):c.*2243C>T rs531980160 0.00045
NM_000444.6(PHEX):c.2214G>A (p.Thr738=) rs140742016 0.00035
NM_000388.4(CASR):c.2824G>A (p.Glu942Lys) rs76327999 0.00034
NM_000444.6(PHEX):c.10G>C (p.Glu4Gln) rs147859619 0.00030
NM_024529.5(CDC73):c.-10G>T rs188082584 0.00024
NM_006208.3(ENPP1):c.*2698G>A rs146550172 0.00023
NM_006208.3(ENPP1):c.2336C>A (p.Thr779Asn) rs200239821 0.00021
NM_000388.4(CASR):c.*87C>T rs202045621 0.00020
NM_000444.6(PHEX):c.1483-7T>C rs369175587 0.00020
NM_000444.6(PHEX):c.631G>A (p.Asp211Asn) rs370610267 0.00019
NM_020638.3(FGF23):c.*1398T>A rs531815578 0.00019
NM_020638.3(FGF23):c.*998C>G rs71583766 0.00017
NM_000388.4(CASR):c.573G>A (p.Glu191=) rs141631116 0.00016
NM_000376.3(VDR):c.1206C>A (p.Arg402=) rs2229829 0.00014
NM_000444.6(PHEX):c.2068C>A (p.His690Asn) rs200733697 0.00014
NM_054027.6(ANKH):c.1115G>A (p.Arg372Gln) rs544848340 0.00014
NM_024529.5(CDC73):c.*2427T>C rs372585994 0.00013
NM_024529.5(CDC73):c.840G>A (p.Leu280=) rs10921320 0.00012
NM_024529.5(CDC73):c.*2677G>A rs192018514 0.00010
NM_000388.4(CASR):c.762T>C (p.His254=) rs76438850 0.00006
NM_024529.5(CDC73):c.*1083A>T rs367704451 0.00006
NM_024529.5(CDC73):c.1417+9C>T rs769784756 0.00003
NM_024529.5(CDC73):c.1418-10C>G rs768713729 0.00003
NM_000444.6(PHEX):c.*48G>A rs765479131 0.00002
NM_020638.3(FGF23):c.249G>A (p.Val83=) rs753676774 0.00002
NM_024529.5(CDC73):c.201G>A (p.Val67=) rs752298916 0.00002
NM_006208.3(ENPP1):c.1791T>C (p.Asn597=) rs548504035 0.00001
NM_020638.3(FGF23):c.138A>G (p.Thr46=) rs368115734 0.00001
NM_024529.5(CDC73):c.*3063G>A rs182545034 0.00001
NM_054027.6(ANKH):c.1304C>T (p.Ala435Val) rs761698657 0.00001
NM_054027.6(ANKH):c.39G>C (p.Leu13=) rs748751320 0.00001
NM_000388.4(CASR):c.-378del rs537119483
NM_000388.4(CASR):c.1008G>C (p.Lys336Asn) rs548403340
NM_000444.6(PHEX):c.653A>G (p.His218Arg) rs774907553
NM_004407.4(DMP1):c.844C>A (p.Leu282Ile) rs141979823
NM_006208.3(ENPP1):c.*150G>A rs571779819
NM_020638.3(FGF23):c.555G>C (p.Ser185=) rs115283398
NM_024529.5(CDC73):c.*3641G>A rs565579791
NM_024529.5(CDC73):c.*3786T>C rs74130943
NM_024529.5(CDC73):c.*3808TTG[1] rs143131672

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