ClinVar Miner

List of variants reported as benign for Joubert syndrome with oculorenal defect by Labcorp Genetics (formerly Invitae), Labcorp

Included ClinVar conditions (19):
Minimum submission review status: Collection method:
Minimum conflict level:
ClinVar version:
Total variants: 67
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HGVS dbSNP gnomAD frequency
NM_001379286.1(ZNF423):c.567T>C (p.Arg189=) rs3803665 0.55755
NM_001379286.1(ZNF423):c.2697T>C (p.Cys899=) rs3803667 0.21148
NM_001044385.3(TMEM237):c.1096G>T (p.Ala366Ser) rs73989521 0.07946
NM_001379286.1(ZNF423):c.1569T>C (p.Asn523=) rs13336762 0.05236
NM_001379286.1(ZNF423):c.1869G>A (p.Pro623=) rs16947741 0.02845
NM_001379286.1(ZNF423):c.1910A>G (p.Asn637Ser) rs34214571 0.02773
NM_001379286.1(ZNF423):c.3850-9C>T rs78514142 0.02527
NM_001044385.3(TMEM237):c.9T>G (p.Thr3=) rs6736435 0.02349
NM_001044385.3(TMEM237):c.395+7A>G rs78297522 0.01932
NM_001379286.1(ZNF423):c.3351G>A (p.Pro1117=) rs113531514 0.01899
NM_016464.5(TMEM138):c.261G>A (p.Val87=) rs35245221 0.01861
NM_001379286.1(ZNF423):c.3361G>A (p.Ala1121Thr) rs147898137 0.01162
NM_001379286.1(ZNF423):c.711C>T (p.Arg237=) rs16947744 0.00969
NM_001044385.3(TMEM237):c.75-13T>C rs116829037 0.00764
NM_001379286.1(ZNF423):c.3164C>T (p.Ala1055Val) rs111229124 0.00625
NM_001379286.1(ZNF423):c.3061C>T (p.Leu1021=) rs35529066 0.00585
NM_001044385.3(TMEM237):c.80-11T>C rs76296365 0.00503
NM_001379286.1(ZNF423):c.1194G>A (p.Pro398=) rs61747467 0.00494
NM_001379286.1(ZNF423):c.1986C>T (p.His662=) rs75294107 0.00469
NM_001379286.1(ZNF423):c.100+13G>A rs143660882 0.00463
NM_001379286.1(ZNF423):c.2562C>A (p.Pro854=) rs12599354 0.00459
NM_001379286.1(ZNF423):c.3291C>T (p.Tyr1097=) rs150027129 0.00408
NM_001379286.1(ZNF423):c.2328C>T (p.His776=) rs73565356 0.00402
NM_001379286.1(ZNF423):c.3226C>A (p.Leu1076Met) rs79706004 0.00398
NM_001379286.1(ZNF423):c.3393C>T (p.Pro1131=) rs61755180 0.00261
NM_001379286.1(ZNF423):c.2133G>A (p.Ser711=) rs143934881 0.00221
NM_001044385.3(TMEM237):c.136+8G>A rs200618675 0.00220
NM_001044385.3(TMEM237):c.554-15G>A rs144051344 0.00213
NM_001044385.3(TMEM237):c.1134T>C (p.Tyr378=) rs77570029 0.00211
NM_001044385.3(TMEM237):c.396-14C>T rs74411816 0.00210
NM_001379286.1(ZNF423):c.2013G>A (p.Ala671=) rs143468235 0.00207
NM_001379286.1(ZNF423):c.312C>T (p.Asp104=) rs117266679 0.00178
NM_001379286.1(ZNF423):c.1326G>A (p.Ala442=) rs16947743 0.00172
NM_001379286.1(ZNF423):c.87C>T (p.Ser29=) rs116537749 0.00166
NM_001044385.3(TMEM237):c.348G>A (p.Ala116=) rs191125006 0.00163
NM_001379286.1(ZNF423):c.3336G>A (p.Val1112=) rs61739947 0.00154
NM_001044385.3(TMEM237):c.1065C>G (p.Leu355=) rs149240122 0.00111
NM_001379286.1(ZNF423):c.807C>T (p.Asp269=) rs145503941 0.00101
NM_001379286.1(ZNF423):c.3602-16C>T rs200838088 0.00099
NM_001379286.1(ZNF423):c.819C>T (p.Cys273=) rs201499268 0.00084
NM_001379286.1(ZNF423):c.1560C>T (p.Asp520=) rs149371639 0.00073
NM_001379286.1(ZNF423):c.1677G>A (p.Pro559=) rs142344079 0.00061
NM_001379286.1(ZNF423):c.3180G>A (p.Ala1060=) rs117592972 0.00048
NM_016464.5(TMEM138):c.216C>T (p.Asn72=) rs145939072 0.00035
NM_001044385.3(TMEM237):c.475A>G (p.Thr159Ala) rs199500256 0.00034
NM_001379286.1(ZNF423):c.3012C>G (p.Pro1004=) rs200127497 0.00029
NM_001379286.1(ZNF423):c.630C>T (p.Ala210=) rs186529267 0.00029
NM_016464.5(TMEM138):c.327C>T (p.Ser109=) rs201318247 0.00028
NM_001044385.3(TMEM237):c.869+10A>G rs376868416 0.00016
NM_001379286.1(ZNF423):c.1827C>T (p.Ala609=) rs376118736 0.00016
NM_001379286.1(ZNF423):c.1131C>T (p.Ser377=) rs369662414 0.00005
NM_001379286.1(ZNF423):c.1365G>C (p.Leu455=) rs548578929 0.00005
NM_001379286.1(ZNF423):c.453C>T (p.Cys151=) rs569824346 0.00005
NM_001044385.3(TMEM237):c.274+11A>G rs200487330 0.00004
NM_001044385.3(TMEM237):c.33G>A (p.Glu11=) rs544767440 0.00004
NM_001379286.1(ZNF423):c.3517-18T>C rs377719857 0.00004
NM_016464.5(TMEM138):c.387G>A (p.Leu129=) rs553815473 0.00004
NM_001044385.3(TMEM237):c.396-13G>A rs570600190 0.00003
NM_001379286.1(ZNF423):c.2268G>T (p.Lys756Asn) rs750555513 0.00003
NM_001044385.3(TMEM237):c.74+16A>G rs538615771 0.00002
NM_001044385.3(TMEM237):c.1159+17del rs766664373
NM_001044385.3(TMEM237):c.1159+17dup
NM_001044385.3(TMEM237):c.678-20_678-17del rs754336127
NM_001044385.3(TMEM237):c.80-18dup rs747217784
NM_001044385.3(TMEM237):c.870-13_870-12del rs555284377
NM_001379286.1(ZNF423):c.2535C>T (p.Thr845=) rs77996576
NM_016464.5(TMEM138):c.129-11dup

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