ClinVar Miner

List of variants reported as likely pathogenic for congenital nephrotic syndrome, Finnish type

Included ClinVar conditions (1):
Minimum submission review status: Collection method:
Minimum conflict level:
ClinVar version:
Total variants: 281
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HGVS dbSNP gnomAD frequency
NM_019109.5(ALG1):c.773C>T (p.Ser258Leu) rs28939378 0.00036
NM_004646.4(NPHS1):c.766C>T (p.Arg256Trp) rs386833960 0.00019
NM_004646.4(NPHS1):c.559G>A (p.Val187Met) rs199646884 0.00016
NM_004646.4(NPHS1):c.1868G>T (p.Cys623Phe) rs386833895 0.00007
NM_004646.4(NPHS1):c.2227C>T (p.Arg743Cys) rs386833909 0.00006
NM_004646.4(NPHS1):c.2491C>T (p.Arg831Cys) rs386833915 0.00005
NM_004646.4(NPHS1):c.2928G>T (p.Arg976Ser) rs138656762 0.00004
NM_004646.4(NPHS1):c.3548dup (p.Tyr1183Ter) rs756436580 0.00004
NM_004646.4(NPHS1):c.1701C>A (p.Cys567Ter) rs386833887 0.00003
NM_004646.4(NPHS1):c.2728T>C (p.Ser910Pro) rs143649022 0.00003
NM_004646.4(NPHS1):c.397+2T>C rs1054950770 0.00003
NM_004646.4(NPHS1):c.1219C>T (p.Arg407Trp) rs386833874 0.00002
NM_004646.4(NPHS1):c.1379G>A (p.Arg460Gln) rs386833880 0.00002
NM_004646.4(NPHS1):c.2417C>A (p.Ala806Asp) rs386833912 0.00002
NM_004646.4(NPHS1):c.2600G>A (p.Gly867Asp) rs753656470 0.00002
NM_004646.4(NPHS1):c.319G>A (p.Ala107Thr) rs386833933 0.00002
NM_004646.4(NPHS1):c.3442C>T (p.Gln1148Ter) rs150855173 0.00002
NM_004646.4(NPHS1):c.574C>T (p.Gln192Ter) rs386833953 0.00002
NM_004646.4(NPHS1):c.928G>A (p.Asp310Asn) rs763972372 0.00002
NM_004646.4(NPHS1):c.1019C>A (p.Pro340His) rs386833861 0.00001
NM_004646.4(NPHS1):c.1048T>C (p.Ser350Pro) rs386833863 0.00001
NM_004646.4(NPHS1):c.105G>A (p.Trp35Ter) rs1450477596 0.00001
NM_004646.4(NPHS1):c.1099C>T (p.Arg367Cys) rs386833865 0.00001
NM_004646.4(NPHS1):c.1100G>A (p.Arg367His) rs200905486 0.00001
NM_004646.4(NPHS1):c.1103C>T (p.Pro368Leu) rs386833867 0.00001
NM_004646.4(NPHS1):c.1126C>G (p.Leu376Val) rs386833868 0.00001
NM_004646.4(NPHS1):c.1170+7C>T rs906888001 0.00001
NM_004646.4(NPHS1):c.1481del (p.Ser494fs) rs386833883 0.00001
NM_004646.4(NPHS1):c.1555C>T (p.Pro519Ser) rs386833884 0.00001
NM_004646.4(NPHS1):c.1715G>A (p.Ser572Asn) rs386833889 0.00001
NM_004646.4(NPHS1):c.191G>C (p.Trp64Ser) rs386833897 0.00001
NM_004646.4(NPHS1):c.1954C>T (p.Gln652Ter) rs386833899 0.00001
NM_004646.4(NPHS1):c.2043G>T (p.Trp681Cys) rs386833900 0.00001
NM_004646.4(NPHS1):c.2131C>A (p.Arg711Ser) rs764181464 0.00001
NM_004646.4(NPHS1):c.2500G>T (p.Val834Phe) rs386833917 0.00001
NM_004646.4(NPHS1):c.2596C>T (p.Arg866Ter) rs386833920 0.00001
NM_004646.4(NPHS1):c.2663+2T>G rs762392183 0.00001
NM_004646.4(NPHS1):c.2815+3A>G rs1223946044 0.00001
NM_004646.4(NPHS1):c.313G>A (p.Asp105Asn) rs386833932 0.00001
NM_004646.4(NPHS1):c.320C>T (p.Ala107Val) rs386833934 0.00001
NM_004646.4(NPHS1):c.3287-2A>C rs758432802 0.00001
NM_004646.4(NPHS1):c.527-1G>A rs771143648 0.00001
NM_004646.4(NPHS1):c.532C>T (p.Gln178Ter) rs386833951 0.00001
NM_004646.4(NPHS1):c.534del (p.Thr179fs) rs386833952 0.00001
NM_004646.4(NPHS1):c.58+1G>A rs386833954 0.00001
NM_004646.4(NPHS1):c.692C>A (p.Ser231Ter) rs386833958 0.00001
NM_004646.4(NPHS1):c.728_729del (p.Pro243fs) rs1599845714 0.00001
NM_004646.4(NPHS1):c.808G>T (p.Gly270Cys) rs386833961 0.00001
NC_000019.9:g.(36322665_36326606)_(36326664_36330138)del
NC_000019.9:g.(36337097_36338942)_(36340266_36340451)del
NC_000019.9:g.(36337097_36338942)_(36340556_36341265)del
NM_004646.3(NPHS1):c.1758-8_1785del rs386833891
NM_004646.4(NPHS1):c.-489GA[7] rs139954720
NM_004646.4(NPHS1):c.1001T>C (p.Leu334Pro)
NM_004646.4(NPHS1):c.1012+2T>A
NM_004646.4(NPHS1):c.1013-1G>C rs1057517413
NM_004646.4(NPHS1):c.1013-1G>T
NM_004646.4(NPHS1):c.1020del (p.Ser341fs) rs1555763372
NM_004646.4(NPHS1):c.1040G>A (p.Gly347Glu) rs386833862
NM_004646.4(NPHS1):c.1096A>C (p.Ser366Arg) rs386833864
NM_004646.4(NPHS1):c.109dup (p.Leu37fs)
NM_004646.4(NPHS1):c.1102C>T (p.Pro368Ser) rs386833866
NM_004646.4(NPHS1):c.1117C>T (p.Arg373Ter) rs753535989
NM_004646.4(NPHS1):c.1134G>A (p.Trp378Ter) rs386833869
NM_004646.4(NPHS1):c.1135C>T (p.Arg379Trp) rs386833871
NM_004646.4(NPHS1):c.1135_1136del (p.Arg379fs) rs386833870
NM_004646.4(NPHS1):c.1138C>T (p.Gln380Ter) rs386833872
NM_004646.4(NPHS1):c.1188_1189del (p.Ile397fs)
NM_004646.4(NPHS1):c.1228del (p.Asp410fs)
NM_004646.4(NPHS1):c.1234G>T (p.Gly412Cys) rs142008044
NM_004646.4(NPHS1):c.1250G>T (p.Cys417Phe) rs386833875
NM_004646.4(NPHS1):c.1275del (p.Lys426fs) rs386833876
NM_004646.4(NPHS1):c.1292dup (p.Ser432fs) rs386833877
NM_004646.4(NPHS1):c.1307_1308dup (p.Val437fs) rs386833878
NM_004646.4(NPHS1):c.1315+1G>A
NM_004646.4(NPHS1):c.1316-1G>C rs1973171785
NM_004646.4(NPHS1):c.1316-2A>G rs1555763090
NM_004646.4(NPHS1):c.1334G>A (p.Trp445Ter) rs1057516776
NM_004646.4(NPHS1):c.1337T>A (p.Ile446Asn) rs386833879
NM_004646.4(NPHS1):c.133dup (p.Glu45fs)
NM_004646.4(NPHS1):c.1369del (p.Ala457fs) rs1057516918
NM_004646.4(NPHS1):c.1378del (p.Arg460fs)
NM_004646.4(NPHS1):c.1394G>A (p.Cys465Tyr) rs386833881
NM_004646.4(NPHS1):c.139del (p.Ala47fs) rs386833882
NM_004646.4(NPHS1):c.1414_1415delinsA (p.Pro472fs)
NM_004646.4(NPHS1):c.1434G>A (p.Trp478Ter) rs1242448684
NM_004646.4(NPHS1):c.1454_1455del (p.Val485fs)
NM_004646.4(NPHS1):c.1531C>T (p.Arg511Ter)
NM_004646.4(NPHS1):c.1583G>T (p.Cys528Phe) rs386833885
NM_004646.4(NPHS1):c.163del (p.Val55fs)
NM_004646.4(NPHS1):c.1672C>T (p.Arg558Cys) rs386833886
NM_004646.4(NPHS1):c.1707C>G (p.Ser569Arg) rs386833888
NM_004646.4(NPHS1):c.1724C>A (p.Pro575Gln) rs386833890
NM_004646.4(NPHS1):c.173del (p.Pro58fs)
NM_004646.4(NPHS1):c.1745del (p.Lys582fs) rs1057517021
NM_004646.4(NPHS1):c.1749del (p.Glu585fs)
NM_004646.4(NPHS1):c.174del (p.Gly59fs) rs1057516942
NM_004646.4(NPHS1):c.1757+1G>A rs1555762591
NM_004646.4(NPHS1):c.1760T>G (p.Leu587Arg) rs386833892
NM_004646.4(NPHS1):c.1801G>C (p.Gly601Arg) rs386833893
NM_004646.4(NPHS1):c.181_182insTCTT (p.Ala61fs)
NM_004646.4(NPHS1):c.181_182insTT (p.Ala61fs)
NM_004646.4(NPHS1):c.1829T>A (p.Leu610Gln) rs386833894
NM_004646.4(NPHS1):c.1836_1837dup (p.Ser613fs)
NM_004646.4(NPHS1):c.1838C>A (p.Ser613Ter)
NM_004646.4(NPHS1):c.1875_1878dup (p.Ser627fs)
NM_004646.4(NPHS1):c.187C>T (p.Gln63Ter)
NM_004646.4(NPHS1):c.1905C>T (p.Ser635=) rs386833896
NM_004646.4(NPHS1):c.1921_1922delinsT (p.Asn641fs)
NM_004646.4(NPHS1):c.1928T>C (p.Leu643Pro) rs386833898
NM_004646.4(NPHS1):c.1930+1G>A
NM_004646.4(NPHS1):c.1930+5G>A
NM_004646.4(NPHS1):c.1931-1G>A rs1555762381
NM_004646.4(NPHS1):c.1939G>T (p.Glu647Ter)
NM_004646.4(NPHS1):c.1946del (p.Leu649fs)
NM_004646.4(NPHS1):c.1971del (p.Ala658fs) rs1057517022
NM_004646.4(NPHS1):c.2010_2011del (p.Ser671fs)
NM_004646.4(NPHS1):c.2019C>A (p.Asn673Lys) rs191807913
NM_004646.4(NPHS1):c.2023_2024del (p.Ala675fs) rs755763002
NM_004646.4(NPHS1):c.2063_2069dup (p.Ala691fs)
NM_004646.4(NPHS1):c.2071+1G>T rs2146822164
NM_004646.4(NPHS1):c.2071+2T>C rs386833901
NM_004646.4(NPHS1):c.2072-6C>G rs200253809
NM_004646.4(NPHS1):c.2083del (p.Arg695fs)
NM_004646.4(NPHS1):c.2083dup (p.Arg695fs)
NM_004646.4(NPHS1):c.2114dup (p.His705fs)
NM_004646.4(NPHS1):c.2120G>A (p.Trp707Ter) rs751809997
NM_004646.4(NPHS1):c.2126T>G (p.Val709Gly) rs386833902
NM_004646.4(NPHS1):c.2132G>A (p.Arg711His)
NM_004646.4(NPHS1):c.2156_2163del (p.Leu719fs) rs386833903
NM_004646.4(NPHS1):c.2160dup (p.Cys721fs) rs386833904
NM_004646.4(NPHS1):c.2171C>G (p.Ser724Cys) rs386833905
NM_004646.4(NPHS1):c.2172_2173del (p.Glu725fs) rs386833906
NM_004646.4(NPHS1):c.2177del (p.Gly726fs) rs2146821851
NM_004646.4(NPHS1):c.2179_2212+6del
NM_004646.4(NPHS1):c.2207T>C (p.Val736Ala)
NM_004646.4(NPHS1):c.2216C>T (p.Ala739Val) rs386833907
NM_004646.4(NPHS1):c.2225T>C (p.Ile742Thr) rs386833908
NM_004646.4(NPHS1):c.2227del (p.Arg743fs) rs386833910
NM_004646.4(NPHS1):c.2256_2257insAG (p.Val753fs)
NM_004646.4(NPHS1):c.233dup (p.Gly79fs)
NM_004646.4(NPHS1):c.2354_2355insTCGTCGTGCTGCT (p.Gln785fs)
NM_004646.4(NPHS1):c.2387del (p.Gly796fs) rs1568453378
NM_004646.4(NPHS1):c.2404C>T (p.Arg802Trp) rs386833911
NM_004646.4(NPHS1):c.2405G>C (p.Arg802Pro) rs114203578
NM_004646.4(NPHS1):c.2411_2412del (p.His804fs)
NM_004646.4(NPHS1):c.2442C>G (p.Tyr814Ter) rs386833913
NM_004646.4(NPHS1):c.248dup (p.Tyr83Ter) rs386833914
NM_004646.4(NPHS1):c.2495T>C (p.Leu832Pro) rs386833916
NM_004646.4(NPHS1):c.2504_2505del (p.Arg835fs)
NM_004646.4(NPHS1):c.2506+1G>A rs1973073001
NM_004646.4(NPHS1):c.2512C>A (p.Pro838Thr) rs2146819513
NM_004646.4(NPHS1):c.2515del (p.Gln839fs) rs386833918
NM_004646.4(NPHS1):c.2541del (p.Lys848fs) rs1555761997
NM_004646.4(NPHS1):c.2549_2558del (p.Ala850fs) rs386833919
NM_004646.4(NPHS1):c.2606_2607dup (p.Asn870fs) rs386833921
NM_004646.4(NPHS1):c.2618_2620delinsCC (p.Phe873fs) rs386833922
NM_004646.4(NPHS1):c.2624_2625del (p.Trp875fs)
NM_004646.4(NPHS1):c.2625G>A (p.Trp875Ter) rs386833923
NM_004646.4(NPHS1):c.2629_2630delinsT (p.Thr876_Lys877insTer)
NM_004646.4(NPHS1):c.2663+2T>A rs762392183
NM_004646.4(NPHS1):c.2663G>A (p.Arg888Lys) rs778951863
NM_004646.4(NPHS1):c.2663_2663+9del rs771953692
NM_004646.4(NPHS1):c.2664-4_2670del rs386833924
NM_004646.4(NPHS1):c.2751_2754del (p.Phe918fs)
NM_004646.4(NPHS1):c.2770_2776del (p.Asn924fs) rs386833925
NM_004646.4(NPHS1):c.2783C>A (p.Ser928Ter) rs386833926
NM_004646.4(NPHS1):c.2815+5G>A rs386833927
NM_004646.4(NPHS1):c.2816-3T>G
NM_004646.4(NPHS1):c.2816-4_2822del rs386833928
NM_004646.4(NPHS1):c.2840T>G (p.Leu947Ter)
NM_004646.4(NPHS1):c.2850dup (p.Ser951fs)
NM_004646.4(NPHS1):c.2869G>A (p.Val957Met) rs114849139
NM_004646.4(NPHS1):c.286C>G (p.Leu96Val) rs386833929
NM_004646.4(NPHS1):c.2870T>A (p.Val957Glu) rs763902818
NM_004646.4(NPHS1):c.2882G>A (p.Trp961Ter)
NM_004646.4(NPHS1):c.2902G>T (p.Gly968Cys) rs772979927
NM_004646.4(NPHS1):c.2905del (p.Leu969fs) rs369410355
NM_004646.4(NPHS1):c.2927+1G>A rs386833930
NM_004646.4(NPHS1):c.2927+2T>A rs1973023048
NM_004646.4(NPHS1):c.2928-3del
NM_004646.4(NPHS1):c.2930A>G (p.Tyr977Cys) rs2146816353
NM_004646.4(NPHS1):c.2944dup (p.Thr982fs) rs386833931
NM_004646.4(NPHS1):c.295G>T (p.Glu99Ter)
NM_004646.4(NPHS1):c.2989_2990dup (p.Phe998fs) rs2146816256
NM_004646.4(NPHS1):c.3006_3012del (p.Gln1004fs) rs748819031
NM_004646.4(NPHS1):c.3010C>T (p.Gln1004Ter)
NM_004646.4(NPHS1):c.3061del (p.Asp1021fs)
NM_004646.4(NPHS1):c.3061dup (p.Asp1021fs) rs34124941
NM_004646.4(NPHS1):c.3115dup (p.His1039fs) rs1057516637
NM_004646.4(NPHS1):c.3119_3122dup (p.Ser1042fs)
NM_004646.4(NPHS1):c.3167-1G>A rs1009762900
NM_004646.4(NPHS1):c.3177dup (p.Leu1060fs)
NM_004646.4(NPHS1):c.3224_3228del (p.Leu1075fs)
NM_004646.4(NPHS1):c.3233C>A (p.Ala1078Asp)
NM_004646.4(NPHS1):c.3250del (p.Val1084fs) rs386833935
NM_004646.4(NPHS1):c.3250dup (p.Val1084fs) rs386833935
NM_004646.4(NPHS1):c.3286+1G>A rs1599835856
NM_004646.4(NPHS1):c.3286+5G>A rs1555759089
NM_004646.4(NPHS1):c.3287-2A>G rs758432802
NM_004646.4(NPHS1):c.3311+1_3311+11del
NM_004646.4(NPHS1):c.3311+1_3311+2delinsTC
NM_004646.4(NPHS1):c.3312-1G>A rs786204729
NM_004646.4(NPHS1):c.3329_3330del (p.Val1110fs)
NM_004646.4(NPHS1):c.3335del (p.Asn1112fs) rs1972879328
NM_004646.4(NPHS1):c.333C>A (p.Cys111Ter)
NM_004646.4(NPHS1):c.3352C>T (p.Gln1118Ter)
NM_004646.4(NPHS1):c.3352del (p.Gln1118fs)
NM_004646.4(NPHS1):c.3356_3357dup (p.Thr1120fs) rs386833937
NM_004646.4(NPHS1):c.3357G>A (p.Trp1119Ter)
NM_004646.4(NPHS1):c.3388-1G>A rs730880176
NM_004646.4(NPHS1):c.3388-2A>G rs386833938
NM_004646.4(NPHS1):c.33_34delinsTACACATCTG (p.Leu12fs)
NM_004646.4(NPHS1):c.3418C>T (p.Arg1140Cys) rs143092783
NM_004646.4(NPHS1):c.3481+4A>T rs1057524695
NM_004646.4(NPHS1):c.3482-2A>C
NM_004646.4(NPHS1):c.3482G>T (p.Gly1161Val) rs386833939
NM_004646.4(NPHS1):c.349_357delinsTATA (p.Glu117fs)
NM_004646.4(NPHS1):c.3549C>A (p.Tyr1183Ter) rs767887213
NM_004646.4(NPHS1):c.3554del (p.Pro1185fs)
NM_004646.4(NPHS1):c.3554dup (p.Ser1186fs) rs750714387
NM_004646.4(NPHS1):c.3555_3574del (p.Ser1186fs) rs767832658
NM_004646.4(NPHS1):c.3594+1G>A rs1555758856
NM_004646.4(NPHS1):c.3595-2A>G rs386833940
NM_004646.4(NPHS1):c.3600_3607del
NM_004646.4(NPHS1):c.3613del (p.Trp1205fs) rs1555758163
NM_004646.4(NPHS1):c.3619del (p.Glu1207fs) rs1430464721
NM_004646.4(NPHS1):c.3622_3625del (p.Asp1208fs) rs1186290245
NM_004646.4(NPHS1):c.3699del (p.Phe1234fs)
NM_004646.4(NPHS1):c.3720_*9del (p.Val1241fs) rs386833941
NM_004646.4(NPHS1):c.385C>T (p.Leu129Phe)
NM_004646.4(NPHS1):c.397+1G>C
NM_004646.4(NPHS1):c.398-1G>A rs386833942
NM_004646.4(NPHS1):c.398-1G>C
NM_004646.4(NPHS1):c.398-2A>G rs1555763974
NM_004646.4(NPHS1):c.424_425del (p.Pro142fs)
NM_004646.4(NPHS1):c.444_454delinsACAC (p.Thr149fs)
NM_004646.4(NPHS1):c.45del (p.Leu16fs) rs1555764281
NM_004646.4(NPHS1):c.466dup (p.Tyr156fs)
NM_004646.4(NPHS1):c.468C>G (p.Tyr156Ter) rs386833943
NM_004646.4(NPHS1):c.479G>C (p.Cys160Ser) rs386833944
NM_004646.4(NPHS1):c.483_484del (p.Ser162fs)
NM_004646.4(NPHS1):c.490del (p.Asp164fs)
NM_004646.4(NPHS1):c.49del (p.Leu16_Leu17insTer)
NM_004646.4(NPHS1):c.500C>T (p.Pro167Leu) rs386833945
NM_004646.4(NPHS1):c.508del (p.Asp170fs)
NM_004646.4(NPHS1):c.512T>A (p.Ile171Asn) rs386833946
NM_004646.4(NPHS1):c.515_517del (p.Thr172del) rs386833947
NM_004646.4(NPHS1):c.516del (p.Ile173fs) rs386833948
NM_004646.4(NPHS1):c.518T>A (p.Ile173Asn) rs386833949
NM_004646.4(NPHS1):c.526+1G>C rs371515262
NM_004646.4(NPHS1):c.526+5G>C rs386833950
NM_004646.4(NPHS1):c.547_548insC (p.Ile183fs)
NM_004646.4(NPHS1):c.565G>T (p.Glu189Ter) rs139598219
NM_004646.4(NPHS1):c.58+1G>T rs386833954
NM_004646.4(NPHS1):c.59-1G>T
NM_004646.4(NPHS1):c.595del (p.Glu199fs) rs1057517275
NM_004646.4(NPHS1):c.609-2A>C rs386833955
NM_004646.4(NPHS1):c.614_621delinsTT (p.Thr205_Arg207delinsIle) rs1555763603
NM_004646.4(NPHS1):c.616C>A (p.Pro206Thr)
NM_004646.4(NPHS1):c.619del (p.Arg207fs) rs778217926
NM_004646.4(NPHS1):c.621del (p.Ser208fs) rs2146828521
NM_004646.4(NPHS1):c.641T>A (p.Leu214Ter)
NM_004646.4(NPHS1):c.661_662del (p.Ser221fs) rs386833957
NM_004646.4(NPHS1):c.671dup (p.Glu225fs) rs753394912
NM_004646.4(NPHS1):c.710T>C (p.Leu237Pro) rs373835033
NM_004646.4(NPHS1):c.712delT (p.Phe238fs)
NM_004646.4(NPHS1):c.713-2A>T rs2146828046
NM_004646.4(NPHS1):c.71T>A (p.Leu24Ter)
NM_004646.4(NPHS1):c.728C>T (p.Pro243Leu) rs919999972
NM_004646.4(NPHS1):c.736G>T (p.Glu246Ter) rs386833959
NM_004646.4(NPHS1):c.739del (p.Trp247fs)
NM_004646.4(NPHS1):c.809dup (p.Gly270_Asn271insTer) rs1555763503
NM_004646.4(NPHS1):c.841-2A>C
NM_004646.4(NPHS1):c.847C>T (p.Gln283Ter)
NM_004646.4(NPHS1):c.851del (p.Pro284fs) rs1555763460
NM_004646.4(NPHS1):c.866G>A (p.Trp289Ter) rs781584590
NM_004646.4(NPHS1):c.886G>A (p.Ala296Thr) rs386833962
NM_004646.4(NPHS1):c.902_909del (p.Val301fs)
NM_004646.4(NPHS1):c.94del (p.Arg32fs)
NM_005245.4(FAT1):c.8446_8447dup (p.Phe2817fs) rs1579327590

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