ClinVar Miner

List of variants in gene MSH6 reported as likely benign by PreventionGenetics, part of Exact Sciences

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Gene type:
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Total variants: 111
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HGVS dbSNP gnomAD frequency
NM_000179.3(MSH6):c.431G>T (p.Ser144Ile) rs3211299 0.00158
NM_000179.3(MSH6):c.4001+39C>G rs201482798 0.00112
NM_000179.3(MSH6):c.663A>C (p.Glu221Asp) rs41557217 0.00064
NM_000179.3(MSH6):c.1508C>G (p.Ser503Cys) rs63750897 0.00059
NM_000179.3(MSH6):c.491A>C (p.His164Pro) rs146469162 0.00045
NM_000179.3(MSH6):c.1449G>T (p.Val483=) rs35590297 0.00037
NM_000179.3(MSH6):c.1867C>G (p.Pro623Ala) rs3136334 0.00033
NM_000179.3(MSH6):c.3217C>T (p.Pro1073Ser) rs142254875 0.00028
NM_000179.3(MSH6):c.4002-10T>A rs545466048 0.00026
NM_000179.3(MSH6):c.3438+11_3438+14del rs377746844 0.00023
NM_000179.3(MSH6):c.2925C>T (p.Asn975=) rs139026662 0.00016
NM_000179.3(MSH6):c.3160A>T (p.Ile1054Phe) rs267608075 0.00016
NM_000179.3(MSH6):c.124C>T (p.Pro42Ser) rs34014629 0.00011
NM_000179.3(MSH6):c.628-7C>A rs373129248 0.00011
NM_000179.3(MSH6):c.3245C>T (p.Pro1082Leu) rs191109849 0.00010
NM_000179.3(MSH6):c.1245G>A (p.Gln415=) rs769418914 0.00009
NM_000179.3(MSH6):c.3024C>T (p.Thr1008=) rs587780675 0.00009
NM_000179.3(MSH6):c.3439-10T>A rs730881819 0.00009
NM_000179.3(MSH6):c.2493C>T (p.Pro831=) rs778911612 0.00008
NM_000179.3(MSH6):c.1050C>T (p.Ala350=) rs730881802 0.00006
NM_000179.3(MSH6):c.1674G>A (p.Val558=) rs762442338 0.00006
NM_000179.3(MSH6):c.178T>C (p.Leu60=) rs35819209 0.00006
NM_000179.3(MSH6):c.2169T>C (p.Gly723=) rs769422122 0.00006
NM_000179.3(MSH6):c.3282A>T (p.Ser1094=) rs372996269 0.00006
NM_000179.3(MSH6):c.147C>T (p.Ala49=) rs768803986 0.00005
NM_000179.3(MSH6):c.2239C>T (p.Leu747=) rs63751305 0.00005
NM_000179.3(MSH6):c.3513T>C (p.Asp1171=) rs63749834 0.00005
NM_000179.3(MSH6):c.3852G>A (p.Thr1284=) rs2229018 0.00005
NM_000179.3(MSH6):c.1068T>C (p.Gly356=) rs749752524 0.00004
NM_000179.3(MSH6):c.2271C>T (p.Thr757=) rs142172006 0.00004
NM_000179.3(MSH6):c.3557-3A>T rs41295274 0.00004
NM_000179.3(MSH6):c.3729A>G (p.Thr1243=) rs773807182 0.00004
NM_000179.3(MSH6):c.3807C>T (p.Cys1269=) rs747924946 0.00004
NM_000179.3(MSH6):c.-2G>T rs374748889 0.00003
NM_000179.3(MSH6):c.-8C>T rs565211544 0.00003
NM_000179.3(MSH6):c.1049C>T (p.Ala350Val) rs587782331 0.00003
NM_000179.3(MSH6):c.1053C>T (p.His351=) rs28903083 0.00003
NM_000179.3(MSH6):c.1167C>T (p.Pro389=) rs1042819 0.00003
NM_000179.3(MSH6):c.2319C>T (p.Leu773=) rs63749895 0.00003
NM_000179.3(MSH6):c.240A>G (p.Val80=) rs864622281 0.00003
NM_000179.3(MSH6):c.3426G>A (p.Thr1142=) rs747771350 0.00003
NM_000179.3(MSH6):c.1668T>C (p.Tyr556=) rs730882130 0.00002
NM_000179.3(MSH6):c.2241G>A (p.Leu747=) rs377722465 0.00002
NM_000179.3(MSH6):c.2508C>T (p.Asn836=) rs758170249 0.00002
NM_000179.3(MSH6):c.321T>C (p.Pro107=) rs730881823 0.00002
NM_000179.3(MSH6):c.3711G>A (p.Glu1237=) rs754289472 0.00002
NM_000179.3(MSH6):c.3801+4T>C rs758830540 0.00002
NM_000179.3(MSH6):c.615A>G (p.Glu205=) rs1334827373 0.00002
NM_000179.3(MSH6):c.*11T>C rs757708396 0.00001
NM_000179.3(MSH6):c.*4_*6dup rs1451012329 0.00001
NM_000179.3(MSH6):c.1170T>C (p.Asp390=) rs55882234 0.00001
NM_000179.3(MSH6):c.1179A>T (p.Ala393=) rs144961390 0.00001
NM_000179.3(MSH6):c.1188C>T (p.Leu396=) rs786202626 0.00001
NM_000179.3(MSH6):c.1403G>A (p.Arg468His) rs41295268 0.00001
NM_000179.3(MSH6):c.1740G>A (p.Ser580=) rs762089407 0.00001
NM_000179.3(MSH6):c.1776A>T (p.Val592=) rs56132616 0.00001
NM_000179.3(MSH6):c.2154C>T (p.Ser718=) rs771662801 0.00001
NM_000179.3(MSH6):c.2400T>C (p.Val800=) rs267608071 0.00001
NM_000179.3(MSH6):c.2412A>G (p.Lys804=) rs201460265 0.00001
NM_000179.3(MSH6):c.2850C>T (p.Ser950=) rs571394629 0.00001
NM_000179.3(MSH6):c.2871A>G (p.Lys957=) rs778079788 0.00001
NM_000179.3(MSH6):c.2940A>G (p.Glu980=) rs730881818 0.00001
NM_000179.3(MSH6):c.3013C>A (p.Arg1005=) rs63750563 0.00001
NM_000179.3(MSH6):c.3156G>A (p.Glu1052=) rs761277966 0.00001
NM_000179.3(MSH6):c.3213T>C (p.Asp1071=) rs534232216 0.00001
NM_000179.3(MSH6):c.3300G>A (p.Thr1100=) rs540252208 0.00001
NM_000179.3(MSH6):c.4001+16T>C rs775091710 0.00001
NM_000179.3(MSH6):c.4002-4T>C rs370428032 0.00001
NM_000179.3(MSH6):c.4012C>T (p.Leu1338=) rs1060504743 0.00001
NM_000179.3(MSH6):c.498C>T (p.Tyr166=) rs587779313 0.00001
NM_000179.3(MSH6):c.648A>T (p.Thr216=) rs915873360 0.00001
NM_000179.3(MSH6):c.81C>G (p.Ala27=) rs781496151 0.00001
NM_000179.3(MSH6):c.849G>A (p.Gly283=) rs1057520439 0.00001
NM_000179.3(MSH6):c.*24_*28del rs587779200
NM_000179.3(MSH6):c.1035T>C (p.Asn345=) rs765166082
NM_000179.3(MSH6):c.1284G>A (p.Lys428=) rs767746584
NM_000179.3(MSH6):c.1347G>C (p.Leu449=)
NM_000179.3(MSH6):c.165T>G (p.Pro55=) rs1553408290
NM_000179.3(MSH6):c.1806A>G (p.Ser602=) rs1057520981
NM_000179.3(MSH6):c.1827A>G (p.Leu609=) rs767064953
NM_000179.3(MSH6):c.2010G>A (p.Gly670=) rs1553413390
NM_000179.3(MSH6):c.201C>G (p.Pro67=) rs1553408363
NM_000179.3(MSH6):c.2187C>A (p.Ala729=) rs375610656
NM_000179.3(MSH6):c.231G>A (p.Arg77=) rs1558645412
NM_000179.3(MSH6):c.3012A>G (p.Lys1004=) rs864622378
NM_000179.3(MSH6):c.3151G>A (p.Val1051Ile) rs576269342
NM_000179.3(MSH6):c.3162C>T (p.Ile1054=) rs149605979
NM_000179.3(MSH6):c.3173-10_3173-6del rs781520783
NM_000179.3(MSH6):c.3173-18T>A rs189672273
NM_000179.3(MSH6):c.3228C>T (p.Arg1076=) rs786203698
NM_000179.3(MSH6):c.3246G>A (p.Pro1082=) rs3136351
NM_000179.3(MSH6):c.3259C>T (p.Pro1087Ser) rs63750998
NM_000179.3(MSH6):c.3261C>G (p.Pro1087=) rs370226185
NM_000179.3(MSH6):c.3261C>T (p.Pro1087=) rs370226185
NM_000179.3(MSH6):c.3557-17A>G rs542542093
NM_000179.3(MSH6):c.3708T>C (p.Ala1236=) rs1553333043
NM_000179.3(MSH6):c.4001+2TAAC[2] rs267608132
NM_000179.3(MSH6):c.4001+2TAAC[4] rs267608132
NM_000179.3(MSH6):c.4002-8dup rs267608139
NM_000179.3(MSH6):c.4014G>C (p.Leu1338=) rs61748086
NM_000179.3(MSH6):c.4068G>A (p.Leu1356=) rs192740549
NM_000179.3(MSH6):c.4068_4071dup (p.Lys1358delinsAspTer) rs55740729
NM_000179.3(MSH6):c.408C>T (p.Asp136=) rs878853746
NM_000179.3(MSH6):c.457+27G>T
NM_000179.3(MSH6):c.457+32TG[9] rs397839804
NM_000179.3(MSH6):c.457+52_457+55del
NM_000179.3(MSH6):c.458-20A>C
NM_000179.3(MSH6):c.510T>G (p.Pro170=) rs1572716230
NM_000179.3(MSH6):c.628-7C>T rs373129248
NM_000179.3(MSH6):c.882C>G (p.Val294=) rs1572720691
NM_000179.3(MSH6):c.957G>T (p.Thr319=)

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