ClinVar Miner

List of variants in gene APC reported as benign by GeneDx

Minimum submission review status: Collection method:
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Gene type:
ClinVar version:
Total variants: 143
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HGVS dbSNP gnomAD frequency
NM_000038.6(APC):c.423-256G>A rs392179 0.98018
NM_000038.6(APC):c.5465T>A (p.Val1822Asp) rs459552 0.82099
NM_000038.6(APC):c.136-230C>A rs2464805 0.65666
NM_000038.6(APC):c.1744-290G>A rs458967 0.64971
NM_000038.6(APC):c.1408+743G>A rs2545162 0.60798
NM_000038.6(APC):c.1959-143_1959-140dup rs3839284 0.60294
NM_000038.6(APC):c.1627-315C>T rs187075 0.60209
NM_000038.6(APC):c.5034G>A (p.Gly1678=) rs42427 0.59504
NM_000038.6(APC):c.5880G>A (p.Pro1960=) rs465899 0.59308
NM_000038.6(APC):c.5268T>G (p.Ser1756=) rs866006 0.59230
NM_000038.6(APC):c.4479G>A (p.Thr1493=) rs41115 0.59177
NM_000038.6(APC):c.1635G>A (p.Ala545=) rs351771 0.59150
NM_000038.6(APC):c.934-132del rs141013063 0.57806
NM_000038.6(APC):c.933+261G>T rs12656359 0.52890
NM_000038.6(APC):c.1458T>C (p.Tyr486=) rs2229992 0.46792
NM_000038.6(APC):c.645+173A>G rs2289484 0.41121
NM_000038.6(APC):c.1743+193G>A rs351772 0.39549
NM_000038.6(APC):c.934-132G>T rs12521276 0.25508
NM_000038.6(APC):c.933+916T>G rs17134960 0.11888
NM_001127511.3(APC):c.-31T>G rs78429131 0.09154
NM_000038.6(APC):c.934-92G>C rs80307314 0.08969
NM_001127511.3(APC):c.166-29134C>T rs2439593 0.07510
NM_000038.6(APC):c.136-53T>C rs2304793 0.07347
NM_000038.6(APC):c.*86C>A rs1804197 0.07244
NM_000038.5(APC):c.-30569A>G rs13180781 0.06995
NM_000038.6(APC):c.645+32C>T rs2909961 0.06662
NM_000038.6(APC):c.1744-158A>G rs74915204 0.06497
NM_000038.6(APC):c.1958+235A>G rs6899169 0.05499
NM_001127511.3(APC):c.165+28891G>C rs6867376 0.04945
NM_001354897.2(APC):c.-245A>C rs75580617 0.04642
NM_000038.6(APC):c.645+129A>C rs2289485 0.04561
NM_001127511.3(APC):c.166-29015A>T rs75581138 0.04169
NM_000038.6(APC):c.933+1059G>T rs140665929 0.03045
NM_000038.6(APC):c.7704A>G (p.Gly2568=) rs35043160 0.02992
NM_000038.6(APC):c.532-744G>T rs7732731 0.02895
NM_000038.5(APC):c.-30712G>A rs73216228 0.02857
NM_000038.6(APC):c.1408+1061A>T rs77618087 0.02728
NM_000038.6(APC):c.1958+54A>C rs17164137 0.02187
NM_000038.6(APC):c.7504G>A (p.Gly2502Ser) rs2229995 0.01693
NM_000038.6(APC):c.834+269C>A rs56320268 0.01600
NM_001127511.3(APC):c.166-28922G>A rs116483942 0.01466
NM_000038.5(APC):c.-30642A>G rs116505416 0.01415
NM_000038.6(APC):c.3732A>G (p.Gln1244=) rs74380081 0.01174
NM_000038.6(APC):c.1695A>G (p.Glu565=) rs77921116 0.01170
NM_000038.6(APC):c.730-29A>T rs75083764 0.01144
NM_000038.6(APC):c.7201C>T (p.Leu2401=) rs2229994 0.01134
NM_001354897.2(APC):c.-241delA rs201014315 0.01117
NM_000038.6(APC):c.1312+27G>A rs74975092 0.00973
NM_001127511.3(APC):c.78C>A (p.Ser26Arg) rs113782655 0.00928
NM_000038.6(APC):c.2608C>T (p.Pro870Ser) rs33974176 0.00917
NM_001127511.3(APC):c.-152C>T rs138386816 0.00719
NM_000038.6(APC):c.4326T>A (p.Pro1442=) rs67622085 0.00705
NM_000038.6(APC):c.5265G>A (p.Ala1755=) rs34506289 0.00675
NM_000038.6(APC):c.1959G>A (p.Arg653=) rs72541809 0.00583
NM_000038.6(APC):c.3949G>C (p.Glu1317Gln) rs1801166 0.00570
NM_000038.6(APC):c.1958+8T>C rs62626346 0.00510
NM_000038.6(APC):c.5250C>G (p.Val1750=) rs2229997 0.00497
NM_000038.6(APC):c.7862C>G (p.Ser2621Cys) rs72541816 0.00358
NM_000038.6(APC):c.4420G>A (p.Ala1474Thr) rs139387758 0.00324
NM_000038.6(APC):c.3471G>A (p.Glu1157=) rs143927847 0.00308
NM_000038.6(APC):c.3165A>T (p.Ile1055=) rs61734287 0.00286
NM_000038.6(APC):c.4360A>G (p.Lys1454Glu) rs111866410 0.00271
NM_000038.6(APC):c.4893T>C (p.Ser1631=) rs35634377 0.00268
NM_000038.6(APC):c.3264G>A (p.Lys1088=) rs114774495 0.00255
NM_000038.6(APC):c.3386T>C (p.Leu1129Ser) rs143638171 0.00250
NM_000038.6(APC):c.729+88T>C rs79627325 0.00237
NM_000038.6(APC):c.705A>G (p.Leu235=) rs147036141 0.00213
NM_000038.6(APC):c.-19+512G>A rs550306841 0.00176
NM_000038.6(APC):c.120G>A (p.Glu40=) rs142720069 0.00161
NM_000038.6(APC):c.8068G>A (p.Ala2690Thr) rs140868933 0.00146
NM_000038.6(APC):c.6921G>A (p.Ser2307=) rs2229993 0.00143
NM_000038.6(APC):c.423-17T>A rs534684461 0.00114
NM_000038.6(APC):c.423-16A>T rs78919815 0.00101
NM_000038.6(APC):c.5790A>G (p.Gln1930=) rs141152252 0.00097
NM_000038.6(APC):c.2262T>G (p.Val754=) rs148987776 0.00096
NM_000038.6(APC):c.8043G>C (p.Pro2681=) rs149347068 0.00092
NM_000038.6(APC):c.3963C>T (p.Ser1321=) rs150595875 0.00051
NM_000038.6(APC):c.2322C>T (p.Asp774=) rs145792879 0.00041
NM_000038.6(APC):c.2805C>T (p.Tyr935=) rs137854575 0.00040
NM_000038.6(APC):c.607C>G (p.Gln203Glu) rs141576417 0.00034
NM_000038.6(APC):c.2232T>G (p.Ser744=) rs145751759 0.00032
NM_000038.6(APC):c.4905G>A (p.Gly1635=) rs137988845 0.00031
NM_000038.6(APC):c.5274T>A (p.Ser1758=) rs199600387 0.00024
NM_000038.6(APC):c.6526T>C (p.Leu2176=) rs183468041 0.00023
NM_000038.6(APC):c.1419G>A (p.Gln473=) rs141579422 0.00021
NM_000038.6(APC):c.3006C>T (p.Ala1002=) rs72541810 0.00020
NM_000038.6(APC):c.1488A>T (p.Thr496=) rs9282599 0.00019
NM_000038.6(APC):c.2205G>A (p.Ala735=) rs141001261 0.00019
NM_000038.6(APC):c.6510A>C (p.Pro2170=) rs138571760 0.00016
NM_000038.6(APC):c.6669A>G (p.Ser2223=) rs372680843 0.00016
NM_000038.6(APC):c.6609T>C (p.Val2203=) rs149328018 0.00014
NM_000038.6(APC):c.1548+17T>C rs367690523 0.00013
NM_000038.6(APC):c.450A>G (p.Lys150=) rs116020626 0.00012
NM_000038.6(APC):c.1958+10G>T rs375175370 0.00009
NM_000038.6(APC):c.3786T>C (p.Tyr1262=) rs147411334 0.00009
NM_000038.6(APC):c.4212C>A (p.Ser1404=) rs144655979 0.00008
NM_000038.6(APC):c.934-14C>T rs778707022 0.00007
NM_000038.6(APC):c.1005A>G (p.Leu335=) rs3797704 0.00006
NM_000038.6(APC):c.1443G>A (p.Val481=) rs146179851 0.00006
NM_000038.6(APC):c.7929A>G (p.Leu2643=) rs138796072 0.00006
NM_000038.6(APC):c.-16C>T rs371665872 0.00005
NM_000038.6(APC):c.7878T>G (p.Thr2626=) rs757020188 0.00005
NM_000038.6(APC):c.7986G>A (p.Glu2662=) rs571645304 0.00005
NM_000038.6(APC):c.4416A>T (p.Val1472=) rs773352404 0.00004
NM_000038.6(APC):c.6135C>T (p.Ser2045=) rs187297940 0.00004
NM_000038.6(APC):c.6387G>A (p.Ser2129=) rs374310157 0.00004
NM_000038.6(APC):c.8061A>G (p.Ser2687=) rs746180965 0.00004
NM_000038.6(APC):c.1686G>A (p.Thr562=) rs770256026 0.00003
NM_000038.6(APC):c.7731A>G (p.Ser2577=) rs537187449 0.00003
NM_000038.6(APC):c.1313-9A>G rs368494354 0.00002
NM_000038.6(APC):c.1554G>A (p.Thr518=) rs546568052 0.00002
NM_000038.6(APC):c.1713A>G (p.Ala571=) rs529306174 0.00002
NM_000038.6(APC):c.7821C>T (p.Ser2607=) rs532235331 0.00002
NM_000038.6(APC):c.1746A>G (p.Glu582=) rs876658969 0.00001
NM_000038.6(APC):c.2958T>C (p.Tyr986=) rs746581330 0.00001
NM_000038.6(APC):c.3909A>G (p.Gln1303=) rs746289994 0.00001
NM_000038.6(APC):c.5244C>T (p.Asp1748=) rs748776990 0.00001
NM_000038.6(APC):c.5805G>A (p.Gln1935=) rs377040690 0.00001
NM_000038.6(APC):c.646-20G>A rs1057517635 0.00001
NM_000038.6(APC):c.7107A>G (p.Pro2369=) rs778471612 0.00001
NM_000038.6(APC):c.7125A>G (p.Gln2375=) rs587780603 0.00001
NM_000038.6(APC):c.7395T>C (p.Leu2465=) rs369906346 0.00001
NM_000038.6(APC):c.8298C>T (p.Ser2766=) rs876658523 0.00001
NM_000038.5:c.423-17insT
NM_000038.6(APC):c.*2AG[2] rs758692443
NM_000038.6(APC):c.1548+297dup rs35305379
NM_000038.6(APC):c.1627-382del rs34947690
NM_000038.6(APC):c.2031C>T (p.Val677=) rs769363082
NM_000038.6(APC):c.3462AGA[2] (p.Glu1157del) rs386833391
NM_000038.6(APC):c.423-17dup rs35031194
NM_000038.6(APC):c.423-4del rs730881230
NM_000038.6(APC):c.4962T>C (p.Ala1654=) rs551322279
NM_000038.6(APC):c.5250C>T (p.Val1750=) rs2229997
NM_000038.6(APC):c.5268T>A (p.Ser1756=) rs866006
NM_000038.6(APC):c.532-1111dup rs546796435
NM_000038.6(APC):c.5745G>C (p.Lys1915Asn) rs201988789
NM_000038.6(APC):c.7308A>G (p.Val2436=) rs1220693522
NM_000038.6(APC):c.777G>T (p.Arg259=) rs147704593
NM_000038.6(APC):c.834+263dup rs59431836
NM_000038.6(APC):c.934-111dup rs71590728
NM_000038.6(APC):c.934-17del rs762333924
NM_001127511.3(APC):c.-133C>G rs79896135
NM_001127511.3(APC):c.165+29214A>G rs2464810

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