ClinVar Miner

List of variants in gene CDH1 reported as likely benign by GeneDx

Minimum submission review status: Collection method:
Minimum conflict level:
Gene type:
ClinVar version:
Total variants: 264
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HGVS dbSNP gnomAD frequency
NM_004360.5(CDH1):c.48+136C>G rs36037011 0.02787
NM_004360.5(CDH1):c.2440-143G>A rs34238989 0.01561
NM_004360.3(CDH1):c.-197A>C rs28372783 0.01088
NM_004360.5(CDH1):c.2440-126A>G rs35316236 0.00646
NM_004360.5(CDH1):c.1137+86T>G rs35160345 0.00568
NM_004360.5(CDH1):c.1321-88C>T rs33934457 0.00519
NM_004360.5(CDH1):c.832+168T>C rs16958375 0.00517
NM_004360.5(CDH1):c.388-220C>T rs78832677 0.00516
NM_004360.5(CDH1):c.-84G>A rs374268061 0.00369
NM_004360.5(CDH1):c.164-254G>A rs34344473 0.00357
NM_004360.5(CDH1):c.88C>A (p.Pro30Thr) rs139866691 0.00129
NM_004360.5(CDH1):c.2104G>A (p.Glu702Lys) rs149127230 0.00058
NM_004360.5(CDH1):c.1138-3C>T rs36103202 0.00042
NM_004360.5(CDH1):c.808T>G (p.Ser270Ala) rs587776399 0.00038
NM_004360.5(CDH1):c.892G>A (p.Ala298Thr) rs142822590 0.00028
NM_004360.5(CDH1):c.2413G>A (p.Asp805Asn) rs200894246 0.00026
NM_004360.5(CDH1):c.8C>G (p.Pro3Arg) rs587782484 0.00023
NM_004360.5(CDH1):c.1018A>G (p.Thr340Ala) rs116093741 0.00022
NM_004360.5(CDH1):c.670C>T (p.Arg224Cys) rs200310662 0.00021
NM_004360.5(CDH1):c.1568A>G (p.Tyr523Cys) rs553907248 0.00016
NM_004360.5(CDH1):c.2329G>A (p.Asp777Asn) rs372989292 0.00015
NM_004360.5(CDH1):c.394G>A (p.Val132Ile) rs142498771 0.00015
NM_004360.5(CDH1):c.2635G>A (p.Gly879Ser) rs200911775 0.00013
NM_004360.5(CDH1):c.1409C>T (p.Thr470Ile) rs370864592 0.00012
NM_004360.5(CDH1):c.1223C>T (p.Ala408Val) rs138135866 0.00011
NM_004360.5(CDH1):c.2512A>G (p.Ser838Gly) rs121964872 0.00011
NM_004360.5(CDH1):c.1711+9G>A rs368770384 0.00010
NM_004360.5(CDH1):c.1888C>G (p.Leu630Val) rs2276331 0.00009
NM_004360.5(CDH1):c.1314A>G (p.Thr438=) rs547316616 0.00008
NM_004360.5(CDH1):c.164T>G (p.Val55Gly) rs587778174 0.00008
NM_004360.5(CDH1):c.387+5G>A rs113055163 0.00008
NM_004360.5(CDH1):c.1298A>G (p.Asp433Gly) rs376097289 0.00007
NM_004360.5(CDH1):c.1710T>C (p.Asn570=) rs202115589 0.00007
NM_004360.5(CDH1):c.1416C>A (p.Thr472=) rs139937234 0.00006
NM_004360.5(CDH1):c.1422C>T (p.Thr474=) rs375843744 0.00006
NM_004360.5(CDH1):c.214G>A (p.Asp72Asn) rs35606263 0.00006
NM_004360.5(CDH1):c.2637C>T (p.Gly879=) rs141001592 0.00006
NM_004360.5(CDH1):c.1023T>C (p.Tyr341=) rs587776398 0.00004
NM_004360.5(CDH1):c.1137+20G>A rs34210985 0.00004
NM_004360.5(CDH1):c.1174G>A (p.Val392Ile) rs141864044 0.00004
NM_004360.5(CDH1):c.1936+8C>T rs776624068 0.00004
NM_004360.5(CDH1):c.213C>T (p.Leu71=) rs376667778 0.00004
NM_004360.5(CDH1):c.2494G>A (p.Val832Met) rs35572355 0.00004
NM_004360.5(CDH1):c.375C>A (p.Pro125=) rs773044699 0.00004
NM_004360.5(CDH1):c.780C>T (p.Pro260=) rs765090311 0.00004
NM_004360.5(CDH1):c.*17G>A rs372936969 0.00003
NM_004360.5(CDH1):c.1173C>T (p.Val391=) rs148080550 0.00003
NM_004360.5(CDH1):c.1371G>A (p.Thr457=) rs370368644 0.00003
NM_004360.5(CDH1):c.2331C>T (p.Asp777=) rs114265540 0.00003
NM_004360.5(CDH1):c.304G>A (p.Ala102Thr) rs368492235 0.00003
NM_004360.5(CDH1):c.688-4T>C rs781633588 0.00003
NM_004360.5(CDH1):c.714C>T (p.Asn238=) rs780297063 0.00003
NM_004360.5(CDH1):c.759C>T (p.Thr253=) rs372934565 0.00003
NM_004360.5(CDH1):c.*7C>T rs9282652 0.00002
NM_004360.5(CDH1):c.1009-16G>A rs1057521282 0.00002
NM_004360.5(CDH1):c.1017T>C (p.Pro339=) rs746639322 0.00002
NM_004360.5(CDH1):c.1119G>A (p.Pro373=) rs758258272 0.00002
NM_004360.5(CDH1):c.164-17T>C rs916075301 0.00002
NM_004360.5(CDH1):c.1684A>G (p.Thr562Ala) rs587782061 0.00002
NM_004360.5(CDH1):c.1824G>A (p.Lys608=) rs373987896 0.00002
NM_004360.5(CDH1):c.188G>A (p.Arg63Gln) rs587780117 0.00002
NM_004360.5(CDH1):c.2079C>T (p.Gly693=) rs771993728 0.00002
NM_004360.5(CDH1):c.2157T>G (p.Ala719=) rs762224244 0.00002
NM_004360.5(CDH1):c.2296-14T>C rs755950355 0.00002
NM_004360.5(CDH1):c.2346G>A (p.Val782=) rs770269419 0.00002
NM_004360.5(CDH1):c.2355C>T (p.Asn785=) rs375988871 0.00002
NM_004360.5(CDH1):c.378G>A (p.Pro126=) rs786201504 0.00002
NM_004360.5(CDH1):c.388-4T>C rs750722169 0.00002
NM_004360.5(CDH1):c.510A>G (p.Pro170=) rs774962542 0.00002
NM_004360.5(CDH1):c.688-14C>T rs189969617 0.00002
NM_004360.5(CDH1):c.906C>T (p.Tyr302=) rs370197479 0.00002
NM_004360.5(CDH1):c.*3G>C rs753123245 0.00001
NM_004360.5(CDH1):c.1008+18T>A rs1057523963 0.00001
NM_004360.5(CDH1):c.1009-13G>A rs557444760 0.00001
NM_004360.5(CDH1):c.1009-6C>T rs771652165 0.00001
NM_004360.5(CDH1):c.1009-8C>T rs201227194 0.00001
NM_004360.5(CDH1):c.1047C>T (p.Asp349=) rs929343982 0.00001
NM_004360.5(CDH1):c.1083T>C (p.Ala361=) rs1057521835 0.00001
NM_004360.5(CDH1):c.1138-10T>C rs758324153 0.00001
NM_004360.5(CDH1):c.1233T>C (p.Ala411=) rs779630879 0.00001
NM_004360.5(CDH1):c.1266A>G (p.Gln422=) rs776805501 0.00001
NM_004360.5(CDH1):c.1321-11C>G rs1184102281 0.00001
NM_004360.5(CDH1):c.1383T>A (p.Pro461=) rs1238176229 0.00001
NM_004360.5(CDH1):c.147C>T (p.Gly49=) rs1057521592 0.00001
NM_004360.5(CDH1):c.1500C>T (p.Gly500=) rs781317341 0.00001
NM_004360.5(CDH1):c.150C>A (p.Arg50=) rs786201262 0.00001
NM_004360.5(CDH1):c.1566-7C>T rs747783435 0.00001
NM_004360.5(CDH1):c.1569T>C (p.Tyr523=) rs876659716 0.00001
NM_004360.5(CDH1):c.1587T>C (p.Thr529=) rs200399144 0.00001
NM_004360.5(CDH1):c.15C>T (p.Ser5=) rs786201287 0.00001
NM_004360.5(CDH1):c.1611G>A (p.Pro537=) rs1060504173 0.00001
NM_004360.5(CDH1):c.163+17G>C rs1005743424 0.00001
NM_004360.5(CDH1):c.163+20G>A rs1057520806 0.00001
NM_004360.5(CDH1):c.164-16G>A rs756957847 0.00001
NM_004360.5(CDH1):c.1842C>T (p.Ile614=) rs773368593 0.00001
NM_004360.5(CDH1):c.1893A>C (p.Thr631=) rs786201452 0.00001
NM_004360.5(CDH1):c.1902G>A (p.Ala634=) rs754404223 0.00001
NM_004360.5(CDH1):c.1929C>T (p.Asn643=) rs374152504 0.00001
NM_004360.5(CDH1):c.2046G>A (p.Glu682=) rs753209043 0.00001
NM_004360.5(CDH1):c.2053G>A (p.Val685Met) rs550612843 0.00001
NM_004360.5(CDH1):c.2073C>T (p.Ala691=) rs536104508 0.00001
NM_004360.5(CDH1):c.2121T>C (p.Ile707=) rs764657974 0.00001
NM_004360.5(CDH1):c.2164+17A>C rs746926799 0.00001
NM_004360.5(CDH1):c.2164+3A>G rs750651204 0.00001
NM_004360.5(CDH1):c.2165-10A>C rs753982211 0.00001
NM_004360.5(CDH1):c.2165-12C>T rs760834250 0.00001
NM_004360.5(CDH1):c.2167C>T (p.Leu723=) rs142649208 0.00001
NM_004360.5(CDH1):c.2221T>C (p.Leu741=) rs772531531 0.00001
NM_004360.5(CDH1):c.2295+14A>G rs1024244866 0.00001
NM_004360.5(CDH1):c.2295+15C>T rs754578936 0.00001
NM_004360.5(CDH1):c.2296-19C>T rs764266486 0.00001
NM_004360.5(CDH1):c.2316G>T (p.Leu772=) rs1057523941 0.00001
NM_004360.5(CDH1):c.2358C>T (p.Asp786=) rs760701558 0.00001
NM_004360.5(CDH1):c.240T>C (p.Asp80=) rs760062352 0.00001
NM_004360.5(CDH1):c.2440-11T>A rs769677489 0.00001
NM_004360.5(CDH1):c.2440-16G>T rs745826347 0.00001
NM_004360.5(CDH1):c.2505T>C (p.Tyr835=) rs786202613 0.00001
NM_004360.5(CDH1):c.2577T>C (p.Tyr859=) rs765545887 0.00001
NM_004360.5(CDH1):c.2638G>A (p.Glu880Lys) rs34507583 0.00001
NM_004360.5(CDH1):c.270G>C (p.Arg90=) rs777822181 0.00001
NM_004360.5(CDH1):c.286A>G (p.Ile96Val) rs749306433 0.00001
NM_004360.5(CDH1):c.357G>C (p.Val119=) rs764499933 0.00001
NM_004360.5(CDH1):c.387+18T>C rs751887336 0.00001
NM_004360.5(CDH1):c.387+6T>C rs764434962 0.00001
NM_004360.5(CDH1):c.388-7C>G rs201402744 0.00001
NM_004360.5(CDH1):c.462A>G (p.Arg154=) rs1057520261 0.00001
NM_004360.5(CDH1):c.49-11C>G rs746446678 0.00001
NM_004360.5(CDH1):c.49-8C>A rs774761552 0.00001
NM_004360.5(CDH1):c.532-7T>C rs1432324307 0.00001
NM_004360.5(CDH1):c.546A>C (p.Lys182Asn) rs201141645 0.00001
NM_004360.5(CDH1):c.561G>A (p.Lys187=) rs765426607 0.00001
NM_004360.5(CDH1):c.570C>T (p.Tyr190=) rs761753486 0.00001
NM_004360.5(CDH1):c.582C>T (p.Gly194=) rs786202924 0.00001
NM_004360.5(CDH1):c.604G>A (p.Val202Ile) rs546716073 0.00001
NM_004360.5(CDH1):c.774C>T (p.Asn258=) rs1057522747 0.00001
NM_004360.5(CDH1):c.832+9A>T rs1057521268 0.00001
NM_004360.5(CDH1):c.833-17T>A rs1057520572 0.00001
NM_004360.5(CDH1):c.833-20A>T rs1057521024 0.00001
NM_004360.5(CDH1):c.858C>A (p.Ala286=) rs876660354 0.00001
NM_004360.5(CDH1):c.867G>A (p.Ala289=) rs754143182 0.00001
NM_004360.3(CDH1):c.48+6_48+7delinsTT rs786200947
NM_004360.5(CDH1):c.*20C>T rs781160222
NM_004360.5(CDH1):c.-2C>T rs1567470707
NM_004360.5(CDH1):c.-6C>T rs1064794910
NM_004360.5(CDH1):c.-8G>C rs879449703
NM_004360.5(CDH1):c.1008+15G>A rs1057520564
NM_004360.5(CDH1):c.1008+5_1008+8dup rs1555515665
NM_004360.5(CDH1):c.1020G>T (p.Thr340=) rs61747632
NM_004360.5(CDH1):c.1059G>A (p.Glu353=) rs537703872
NM_004360.5(CDH1):c.1107C>T (p.Asn369=) rs786201189
NM_004360.5(CDH1):c.1137+20G>C rs34210985
NM_004360.5(CDH1):c.1137+9A>C rs780705655
NM_004360.5(CDH1):c.1137+9A>G rs780705655
NM_004360.5(CDH1):c.1170C>T (p.Asn390=) rs766505270
NM_004360.5(CDH1):c.1194G>A (p.Val398=) rs1303655653
NM_004360.5(CDH1):c.1212C>T (p.Pro404=) rs2152133441
NM_004360.5(CDH1):c.1221A>C (p.Pro407=) rs1555515894
NM_004360.5(CDH1):c.1254T>C (p.Asp418=) rs1057520936
NM_004360.5(CDH1):c.1321-10T>C rs1597897718
NM_004360.5(CDH1):c.1321-5T>C rs1057522088
NM_004360.5(CDH1):c.1321-8C>T rs2152134657
NM_004360.5(CDH1):c.1356A>T (p.Leu452=) rs61747633
NM_004360.5(CDH1):c.1401C>A (p.Thr467=) rs1057523832
NM_004360.5(CDH1):c.1440G>C (p.Val480=) rs756517599
NM_004360.5(CDH1):c.1521C>T (p.Ser507=) rs149687235
NM_004360.5(CDH1):c.1548T>C (p.Phe516=) rs1555516189
NM_004360.5(CDH1):c.1565+13A>G rs1057522979
NM_004360.5(CDH1):c.1565+7G>T rs1555516206
NM_004360.5(CDH1):c.1565C>T (p.Thr522Ile) rs863224725
NM_004360.5(CDH1):c.1566-17A>G rs1555516507
NM_004360.5(CDH1):c.1572G>C (p.Arg524=) rs771419468
NM_004360.5(CDH1):c.1593C>T (p.Asn531=) rs1596960362
NM_004360.5(CDH1):c.1602G>A (p.Glu534=) rs753031606
NM_004360.5(CDH1):c.1629C>T (p.Ser543=) rs1596960459
NM_004360.5(CDH1):c.163+14G>T rs1057521411
NM_004360.5(CDH1):c.163+17G>T rs1005743424
NM_004360.5(CDH1):c.163+18G>A rs1555509793
NM_004360.5(CDH1):c.163+4_163+6dup rs1205684749
NM_004360.5(CDH1):c.164-4G>A rs780375749
NM_004360.5(CDH1):c.164-6C>T rs557313031
NM_004360.5(CDH1):c.1680G>A (p.Thr560=) rs35741240
NM_004360.5(CDH1):c.1690C>T (p.Leu564=) rs786201342
NM_004360.5(CDH1):c.1767T>C (p.Asn589=) rs763862527
NM_004360.5(CDH1):c.180C>T (p.Cys60=) rs1555514402
NM_004360.5(CDH1):c.1839C>T (p.Asn613=) rs1555516861
NM_004360.5(CDH1):c.183C>T (p.Thr61=) rs575896144
NM_004360.5(CDH1):c.1872T>A (p.Ser624=) rs876659970
NM_004360.5(CDH1):c.1917C>T (p.Thr639=) rs1057522719
NM_004360.5(CDH1):c.1937-11_1937-8dup rs751319164
NM_004360.5(CDH1):c.1937-145_1937-144dup rs146046879
NM_004360.5(CDH1):c.1937-4C>G rs1057523153
NM_004360.5(CDH1):c.195G>A (p.Arg65=) rs1057522751
NM_004360.5(CDH1):c.2165-19G>T rs1555517632
NM_004360.5(CDH1):c.2165-4C>T rs1060504170
NM_004360.5(CDH1):c.2217G>A (p.Glu739=) rs1596970771
NM_004360.5(CDH1):c.2247G>A (p.Arg749=) rs1555517667
NM_004360.5(CDH1):c.2265T>C (p.Tyr755=) rs876658944
NM_004360.5(CDH1):c.2296-11T>A rs1057523636
NM_004360.5(CDH1):c.2296-15C>T rs1057521164
NM_004360.5(CDH1):c.2296-16C>T rs1057521683
NM_004360.5(CDH1):c.2298C>T (p.Asp766=) rs1057523470
NM_004360.5(CDH1):c.2310C>T (p.Ser770=) rs754162869
NM_004360.5(CDH1):c.2343A>G (p.Glu781=) rs587780119
NM_004360.5(CDH1):c.2400C>T (p.Arg800=) rs786201718
NM_004360.5(CDH1):c.2421T>C (p.Ile807=) rs761852331
NM_004360.5(CDH1):c.2439+9T>C rs1555517919
NM_004360.5(CDH1):c.2440-10T>C rs864622564
NM_004360.5(CDH1):c.2440-12CTT[2] rs587782757
NM_004360.5(CDH1):c.2440-19T>C rs1057521042
NM_004360.5(CDH1):c.2475G>A (p.Pro825=) rs755658014
NM_004360.5(CDH1):c.2481T>C (p.Tyr827=) rs767045364
NM_004360.5(CDH1):c.2493C>T (p.Leu831=) rs779267700
NM_004360.5(CDH1):c.24C>T (p.Leu8=) rs1057521296
NM_004360.5(CDH1):c.2508A>G (p.Glu836=) rs1555518241
NM_004360.5(CDH1):c.2550C>G (p.Ser850=) rs1057521295
NM_004360.5(CDH1):c.2556G>A (p.Glu852=) rs760315494
NM_004360.5(CDH1):c.2628C>T (p.Tyr876=) rs778681919
NM_004360.5(CDH1):c.2646C>T (p.Asp882=) rs1555518315
NM_004360.5(CDH1):c.270G>A (p.Arg90=) rs777822181
NM_004360.5(CDH1):c.30G>T (p.Ala10=) rs1203525339
NM_004360.5(CDH1):c.327G>A (p.Lys109=) rs1057522987
NM_004360.5(CDH1):c.32TGC[7] (p.Leu14_Leu15dup) rs587782476
NM_004360.5(CDH1):c.375C>T (p.Pro125=) rs773044699
NM_004360.5(CDH1):c.381C>T (p.Pro127=) rs62055766
NM_004360.5(CDH1):c.388-16T>A rs1057523230
NM_004360.5(CDH1):c.388-18C>T rs1555515167
NM_004360.5(CDH1):c.388-6T>C rs767963300
NM_004360.5(CDH1):c.396T>G (p.Val132=) rs1555515186
NM_004360.5(CDH1):c.417G>A (p.Leu139=) rs1057521858
NM_004360.5(CDH1):c.420C>G (p.Leu140=) rs763562818
NM_004360.5(CDH1):c.456G>A (p.Gln152=) rs745589555
NM_004360.5(CDH1):c.48+10A>G rs1057520986
NM_004360.5(CDH1):c.48+13C>T rs1057520555
NM_004360.5(CDH1):c.48+5C>T rs77312180
NM_004360.5(CDH1):c.49-15T>A rs780547331
NM_004360.5(CDH1):c.49-16C>T rs1057517618
NM_004360.5(CDH1):c.49-20C>T rs545811852
NM_004360.5(CDH1):c.49-4C>A rs1057520916
NM_004360.5(CDH1):c.49-7A>G rs1057522665
NM_004360.5(CDH1):c.49-8C>T rs774761552
NM_004360.5(CDH1):c.49-9C>A rs1555509752
NM_004360.5(CDH1):c.510A>C (p.Pro170=) rs774962542
NM_004360.5(CDH1):c.531+16C>A rs376565246
NM_004360.5(CDH1):c.531+17T>C rs1057520562
NM_004360.5(CDH1):c.532-18C>A rs200673941
NM_004360.5(CDH1):c.532-9dup rs1555515243
NM_004360.5(CDH1):c.546A>G (p.Lys182=) rs201141645
NM_004360.5(CDH1):c.600C>T (p.Pro200=) rs973385466
NM_004360.5(CDH1):c.618T>C (p.Ile206=) rs1057521280
NM_004360.5(CDH1):c.687+11C>T rs746109821
NM_004360.5(CDH1):c.687+394del rs536314715
NM_004360.5(CDH1):c.786C>T (p.Phe262=) rs876658994
NM_004360.5(CDH1):c.820G>A (p.Gly274Ser) rs781513008
NM_004360.5(CDH1):c.832+17G>A rs373179391
NM_004360.5(CDH1):c.832+6T>C rs1567505832
NM_004360.5(CDH1):c.832+6T>G rs1567505832
NM_004360.5(CDH1):c.833-17T>C rs1057520572
NM_004360.5(CDH1):c.833-20A>G rs1057521024
NM_004360.5(CDH1):c.833-6T>C rs1399679461
NM_004360.5(CDH1):c.864C>T (p.Asp288=) rs1057520804
NM_004360.5(CDH1):c.90T>C (p.Pro30=) rs1555509766
NM_004360.5(CDH1):c.915C>T (p.Leu305=) rs1057522178
NM_004360.5(CDH1):c.924T>C (p.Asp308=) rs1555515629
NM_004360.5(CDH1):c.966C>T (p.Asn322=) rs1555515654

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