ClinVar Miner

List of variants in gene LAMP2 reported as benign by GeneDx

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Gene type:
ClinVar version:
Total variants: 61
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HGVS dbSNP gnomAD frequency
NM_002294.3(LAMP2):c.156A>T (p.Val52=) rs12097 0.39300
NM_002294.3(LAMP2):c.929-293T>C rs7889047 0.37204
NM_002294.2(LAMP2):c.-421T>G rs28603270 0.13168
NM_002294.3(LAMP2):c.*297A>C rs8160 0.09815
NM_002294.3(LAMP2):c.*486A>G rs5957383 0.09784
NM_002294.3(LAMP2):c.*2395A>G rs10127185 0.09686
NM_002294.3(LAMP2):c.*1314T>C rs5957381 0.09242
NM_002294.3(LAMP2):c.*3248G>A rs5957380 0.09182
NM_002294.3(LAMP2):c.*2195T>C rs13441024 0.09137
NM_002294.3(LAMP2):c.*2460A>G rs10127182 0.08629
NM_002294.3(LAMP2):c.398-110T>G rs59050206 0.08078
NM_002294.3(LAMP2):c.865-121C>T rs58622214 0.07340
NM_002294.3(LAMP2):c.928+245A>G rs73639314 0.07230
NM_002294.3(LAMP2):c.65-314G>A rs73639316 0.05296
NM_002294.3(LAMP2):c.865-221A>T rs56067154 0.05107
NM_002294.3(LAMP2):c.*1589A>G rs73612906 0.02961
NM_002294.3(LAMP2):c.927C>T (p.Ser309=) rs73219144 0.02702
NM_002294.3(LAMP2):c.*205C>T rs41300191 0.02340
NM_002294.3(LAMP2):c.*2524T>C rs150119198 0.01799
NM_002294.3(LAMP2):c.*2746A>G rs3827478 0.01441
NM_002294.3(LAMP2):c.1093+2514G>A rs144140265 0.00396
NM_002294.3(LAMP2):c.929-35A>T rs149208640 0.00198
NM_013995.2(LAMP2):c.-138G>T rs144321444 0.00147
NM_002294.3(LAMP2):c.755T>G (p.Ile252Ser) rs141541387 0.00117
NM_002294.3(LAMP2):c.-33C>T rs368403767 0.00067
NM_002294.3(LAMP2):c.339C>T (p.Ser113=) rs147369153 0.00067
NM_002294.3(LAMP2):c.504C>T (p.Tyr168=) rs150520869 0.00060
NM_002294.3(LAMP2):c.385G>A (p.Ala129Thr) rs149276836 0.00045
NM_002294.3(LAMP2):c.-10C>T rs201209341 0.00028
NM_002294.3(LAMP2):c.1142T>C (p.Val381Ala) rs139633545 0.00026
NM_002294.3(LAMP2):c.741+11C>T rs149155417 0.00024
NM_002294.3(LAMP2):c.74G>A (p.Arg25Gln) rs750118236 0.00016
NM_002294.3(LAMP2):c.1093+2450G>A rs149783672 0.00015
NM_002294.3(LAMP2):c.591G>A (p.Val197=) rs201030806 0.00014
NM_002294.3(LAMP2):c.1093+2590G>A rs1014291449 0.00006
NM_002294.3(LAMP2):c.-7C>T rs762305947 0.00005
NM_002294.3(LAMP2):c.1093+2589C>T rs377303143 0.00005
NM_002294.3(LAMP2):c.276C>T (p.Phe92=) rs754577706 0.00003
NM_002294.3(LAMP2):c.65-12A>T rs730880474 0.00003
NM_002294.3(LAMP2):c.-39C>T rs778851681 0.00002
NM_002294.3(LAMP2):c.-27C>T rs587781015 0.00001
NM_002294.3(LAMP2):c.-42T>C rs1357782623 0.00001
NM_002294.3(LAMP2):c.183T>C (p.Tyr61=) rs397516736 0.00001
NC_000023.11:g.120469369G>A rs1016964993
NC_000023.11:g.120469521del rs60468300
NC_000023.11:g.120469521dup rs60468300
NM_002294.3(LAMP2):c.*1993_*2034del rs372028662
NM_002294.3(LAMP2):c.*2148AT[9] rs753399289
NM_002294.3(LAMP2):c.*3031dup rs113549733
NM_002294.3(LAMP2):c.*33A>G rs745798436
NM_002294.3(LAMP2):c.-32GTCGCCGCC[1] rs193922648
NM_002294.3(LAMP2):c.-43G>T rs2147295007
NM_002294.3(LAMP2):c.-4G>C rs200297370
NM_002294.3(LAMP2):c.1093+2230_1093+2233del rs68126940
NM_002294.3(LAMP2):c.1093+2527C>T rs2147277471
NM_002294.3(LAMP2):c.741+112GTTT[5] rs368190024
NM_002294.3(LAMP2):c.742-16TCT[2] rs730880476
NM_002294.3(LAMP2):c.742-201dup rs374381929
NM_002294.3(LAMP2):c.98T>A (p.Leu33Ter) rs2147287668
NM_013995.2(LAMP2):c.-135G>C rs181118176
NM_013995.2(LAMP2):c.-168del rs760941179

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