ClinVar Miner

List of variants reported as not provided by Psychiatry Genetics Yale University

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ClinVar version:
Total variants: 236
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HGVS dbSNP gnomAD frequency
NM_172370.5(DAOA):c.89G>A (p.Arg30Lys) rs2391191 0.31282
NM_018662.3(DISC1):c.791G>A (p.Arg264Gln) rs3738401 0.25560
NM_000834.5(GRIN2B):c.2664C>T (p.Thr888=) rs1806201 0.23527
NM_000834.5(GRIN2B):c.4197T>C (p.His1399=) rs1805247 0.16667
NM_018662.3(DISC1):c.1819C>T (p.Leu607Phe) rs6675281 0.14477
NM_000834.5(GRIN2B):c.15G>A (p.Ala5=) rs34315573 0.03193
NM_000834.5(GRIN2B):c.4218C>T (p.Phe1406=) rs1805246 0.02603
NM_000834.5(GRIN2B):c.2691C>T (p.Asn897=) rs35125534 0.01112
NM_000834.5(GRIN2B):c.1341C>T (p.Asp447=) rs35025065 0.00902
NM_001159995.3(NRG1):c.37+903C>T rs367543157 0.00540
NM_001159995.3(NRG1):c.37+579G>A rs367543151 0.00243
NM_000744.7(CHRNA4):c.1662G>A (p.Pro554=) rs121912284 0.00165
NM_000744.7(CHRNA4):c.1460G>A (p.Arg487Gln) rs121912280 0.00152
NM_001159995.3(NRG1):c.37+865G>A rs367543156 0.00151
NM_032595.5(PPP1R9B):c.462C>T (p.Ser154=) rs367543202 0.00137
NM_001159995.3(NRG1):c.37+596C>T rs367543152 0.00092
NM_000834.5(GRIN2B):c.4240G>T (p.Ala1414Ser) rs140744818 0.00085
NM_032595.5(PPP1R9B):c.1509C>T (p.Ser503=) rs199601113 0.00070
NM_032595.5(PPP1R9B):c.1332C>T (p.Ala444=) rs200300107 0.00049
NM_018662.3(DISC1):c.2063G>A (p.Gly688Glu) rs367543094 0.00041
NM_001159995.3(NRG1):c.37+661G>A rs367543153 0.00037
NM_006906.2(PTPN5):c.103C>A (p.Pro35Thr) rs367543236 0.00034
NM_002739.5(PRKCG):c.714C>T (p.Arg238=) rs367543210 0.00031
NM_000744.7(CHRNA4):c.462G>A (p.Pro154=) rs121912245 0.00030
NM_000744.7(CHRNA4):c.1711G>A (p.Val571Ile) rs121912285 0.00029
NM_018662.3(DISC1):c.1518A>G (p.Pro506=) rs367543091 0.00029
NM_032595.5(PPP1R9B):c.1112C>T (p.Ala371Val) rs367543188 0.00029
NM_032595.5(PPP1R9B):c.1590C>T (p.Thr530=) rs201313568 0.00026
NM_032595.5(PPP1R9B):c.416A>C (p.His139Pro) rs367543203 0.00025
NM_000744.7(CHRNA4):c.1169G>A (p.Gly390Glu) rs121912268 0.00024
NM_001134407.3(GRIN2A):c.2202C>G (p.Val734=) rs367543138 0.00023
NM_018662.3(DISC1):c.2550C>T (p.His850=) rs367543100 0.00022
NM_000744.7(CHRNA4):c.1635G>A (p.Thr545=) rs121912283 0.00021
NM_002037.5(FYN):c.984G>A (p.Gln328=) rs367543107 0.00021
NM_007327.4(GRIN1):c.2214C>T (p.Phe738=) rs367543116 0.00018
NM_000834.5(GRIN2B):c.3648C>T (p.Arg1216=) rs201405157 0.00016
NM_000834.5(GRIN2B):c.2712G>A (p.Thr904=) rs199843136 0.00014
NM_032595.5(PPP1R9B):c.2238G>A (p.Ala746=) rs367543183 0.00014
NM_000744.7(CHRNA4):c.1373C>T (p.Pro458Leu) rs121912277 0.00013
NM_001135179.2(ZDHHC3):c.86A>G (p.Tyr29Cys) rs367543251 0.00013
NM_002739.5(PRKCG):c.1029A>G (p.Pro343=) rs367543215 0.00013
NM_006906.2(PTPN5):c.603C>T (p.Ile201=) rs367543231 0.00012
NM_000744.7(CHRNA4):c.693G>A (p.Pro231=) rs121912250 0.00011
NM_000744.7(CHRNA4):c.948C>T (p.Phe316=) rs121912259 0.00011
NM_001159995.3(NRG1):c.37+676C>A rs367543154 0.00011
NM_002708.4(PPP1CA):c.286A>C (p.Arg96=) rs367543171 0.00011
NM_032122.5(DTNBP1):c.1019A>G (p.Glu340Gly) rs367543102 0.00011
NM_032122.5(DTNBP1):c.1020G>C (p.Glu340Asp) rs367543101 0.00011
NM_032595.5(PPP1R9B):c.1137A>G (p.Val379=) rs199865066 0.00011
NM_000744.7(CHRNA4):c.1228G>A (p.Val410Ile) rs121912272 0.00010
NM_001159995.3(NRG1):c.37+744C>T rs367543155 0.00010
NM_006906.2(PTPN5):c.116T>C (p.Val39Ala) rs367543234 0.00010
NM_032595.5(PPP1R9B):c.336G>A (p.Lys112=) rs367543204 0.00010
NM_000744.7(CHRNA4):c.1359C>T (p.His453=) rs121912276 0.00009
NM_000744.7(CHRNA4):c.729G>A (p.Pro243=) rs121912253 0.00009
NM_000744.7(CHRNA4):c.963C>T (p.Ile321=) rs121912261 0.00009
NM_001159995.3(NRG1):c.37+913G>T rs367543158 0.00009
NM_007327.4(GRIN1):c.2445G>A (p.Gly815=) rs367543117 0.00009
NM_000744.7(CHRNA4):c.1087G>A (p.Val363Met) rs121912266 0.00008
NM_000744.7(CHRNA4):c.1266C>T (p.Cys422=) rs121912274 0.00006
NM_000744.7(CHRNA4):c.461C>T (p.Pro154Leu) rs121912244 0.00006
NM_001134407.3(GRIN2A):c.623C>T (p.Thr208Ile) rs367543124 0.00006
NM_006906.2(PTPN5):c.132C>T (p.Asp44=) rs367543233 0.00006
NM_018662.3(DISC1):c.1729A>G (p.Lys577Glu) rs367543093 0.00006
NM_018662.3(DISC1):c.2295T>A (p.Gly765=) rs367543098 0.00006
NM_018662.3(DISC1):c.768C>T (p.His256=) rs367543085 0.00006
NM_032192.4(PPP1R1B):c.72G>A (p.Gln24=) rs367543178 0.00006
NM_198291.3(SRC):c.1263G>A (p.Ala421=) rs367543245 0.00006
NM_198291.3(SRC):c.12C>T (p.Asn4=) rs367543237 0.00006
NM_198291.3(SRC):c.1323C>A (p.Arg441=) rs367543246 0.00006
NM_198291.3(SRC):c.727C>T (p.Arg243Cys) rs367543241 0.00006
NM_198291.3(SRC):c.846C>T (p.Gly282=) rs367543242 0.00006
NM_013964.5(NRG1):c.1322C>T (p.Thr441Met) rs367543167 0.00005
NM_172370.5(DAOA):c.434A>G (p.Lys145Arg) rs367543081 0.00005
NM_000744.7(CHRNA4):c.1402G>A (p.Val468Ile) rs121912278 0.00004
NM_000744.7(CHRNA4):c.1625C>T (p.Pro542Leu) rs121912281 0.00004
NM_000744.7(CHRNA4):c.585C>G (p.His195Gln) rs121912248 0.00004
NM_000744.7(CHRNA4):c.858C>T (p.Thr286=) rs121912257 0.00004
NM_001134407.3(GRIN2A):c.989C>T (p.Pro330Leu) rs367543120 0.00004
NM_002037.5(FYN):c.573T>C (p.Asp191=) rs367543110 0.00004
NM_002710.4(PPP1CC):c.*891G>A rs367543175 0.00004
NM_002739.5(PRKCG):c.1608C>T (p.Val536=) rs367543216 0.00004
NM_013964.5(NRG1):c.679A>G (p.Met227Val) rs367543161 0.00004
NM_013964.5(NRG1):c.819G>T (p.Lys273Asn) rs367543162 0.00004
NM_000744.7(CHRNA4):c.1224C>T (p.Phe408=) rs121912271 0.00003
NM_000744.7(CHRNA4):c.1425C>T (p.Gly475=) rs121912279 0.00003
NM_000744.7(CHRNA4):c.442C>T (p.Arg148Trp) rs121912243 0.00003
NM_000834.5(GRIN2B):c.2313G>A (p.Gly771=) rs150554184 0.00003
NM_001134407.3(GRIN2A):c.1780C>T (p.Pro594Ser) rs367543140 0.00003
NM_001134407.3(GRIN2A):c.264C>T (p.Asp88=) rs367543127 0.00003
NM_001134407.3(GRIN2A):c.3854G>A (p.Arg1285Lys) rs367543132 0.00003
NM_002708.4(PPP1CA):c.486G>A (p.Ala162=) rs367543169 0.00003
NM_002709.3(PPP1CB):c.114T>C (p.Cys38=) rs367543174 0.00003
NM_002739.5(PRKCG):c.1899C>T (p.Pro633=) rs367543219 0.00003
NM_002739.5(PRKCG):c.861T>C (p.Asn287=) rs367543212 0.00003
NM_006906.2(PTPN5):c.111G>A (p.Pro37=) rs367543235 0.00003
NM_006906.2(PTPN5):c.808C>T (p.Arg270Cys) rs367543228 0.00003
NM_013964.5(NRG1):c.1538C>T (p.Pro513Leu) rs367543168 0.00003
NM_018662.3(DISC1):c.1718C>T (p.Thr573Ile) rs367543092 0.00003
NM_018662.3(DISC1):c.2543G>A (p.Gly848Asp) rs367543099 0.00003
NM_032122.5(DTNBP1):c.950C>G (p.Pro317Arg) rs367543103 0.00003
NM_032192.4(PPP1R1B):c.393G>A (p.Glu131=) rs367543180 0.00003
NM_032192.4(PPP1R1B):c.86G>A (p.Arg29Gln) rs367543179 0.00003
NM_032595.5(PPP1R9B):c.1916C>T (p.Pro639Leu) rs367543185 0.00003
NM_000744.7(CHRNA4):c.1054G>A (p.Val352Met) rs121912264 0.00002
NM_000744.7(CHRNA4):c.1109G>A (p.Arg370Gln) rs121912267 0.00002
NM_000744.7(CHRNA4):c.510C>T (p.Phe170=) rs121912247 0.00002
NM_000834.5(GRIN2B):c.1833T>C (p.Gly611=) rs367543148 0.00002
NM_001134407.3(GRIN2A):c.1161C>T (p.His387=) rs367543146 0.00002
NM_002739.5(PRKCG):c.534C>T (p.Gly178=) rs367543207 0.00002
NM_002739.5(PRKCG):c.613C>T (p.Arg205Trp) rs367543208 0.00002
NM_006906.2(PTPN5):c.1085A>G (p.Tyr362Cys) rs367543226 0.00002
NM_006906.2(PTPN5):c.1331G>A (p.Ser444Asn) rs367543223 0.00002
NM_007327.4(GRIN1):c.1866C>A (p.Gly622=) rs367543114 0.00002
NM_018662.3(DISC1):c.2157G>A (p.Glu719=) rs367543095 0.00002
NM_032595.5(PPP1R9B):c.506G>A (p.Arg169Gln) rs367543201 0.00002
NM_000744.7(CHRNA4):c.1001C>T (p.Ser334Leu) rs121912262 0.00001
NM_000744.7(CHRNA4):c.1184C>T (p.Thr395Met) rs121912269 0.00001
NM_000744.7(CHRNA4):c.1265G>A (p.Cys422Tyr) rs121912273 0.00001
NM_000744.7(CHRNA4):c.1634C>T (p.Thr545Met) rs121912282 0.00001
NM_000744.7(CHRNA4):c.504C>T (p.Phe168=) rs121912246 0.00001
NM_000744.7(CHRNA4):c.617G>C (p.Ser206Thr) rs121912249 0.00001
NM_000744.7(CHRNA4):c.915C>T (p.Leu305=) rs121912258 0.00001
NM_000834.5(GRIN2B):c.14C>T (p.Ala5Val) rs367543147 0.00001
NM_000834.5(GRIN2B):c.3562G>A (p.Gly1188Ser) rs367543149 0.00001
NM_001134407.3(GRIN2A):c.1340A>T (p.Asn447Ile) rs367543145 0.00001
NM_001134407.3(GRIN2A):c.1698C>T (p.Leu566=) rs367543142 0.00001
NM_001134407.3(GRIN2A):c.38C>T (p.Pro13Leu) rs367543131 0.00001
NM_001134407.3(GRIN2A):c.426T>G (p.Ser142=) rs367543125 0.00001
NM_001134407.3(GRIN2A):c.60T>C (p.Gly20=) rs367543130 0.00001
NM_001134407.3(GRIN2A):c.80C>T (p.Ala27Val) rs367543129 0.00001
NM_001134407.3(GRIN2A):c.810A>G (p.Lys270=) rs367543122 0.00001
NM_002037.5(FYN):c.1347G>A (p.Val449=) rs367543106 0.00001
NM_002037.5(FYN):c.333A>G (p.Ile111Met) rs367543111 0.00001
NM_002708.4(PPP1CA):c.408C>T (p.Phe136=) rs367543170 0.00001
NM_002710.4(PPP1CC):c.76A>G (p.Lys26Glu) rs367543176 0.00001
NM_002739.5(PRKCG):c.1746C>T (p.Ala582=) rs367543217 0.00001
NM_002739.5(PRKCG):c.1862G>A (p.Arg621Gln) rs367543218 0.00001
NM_002739.5(PRKCG):c.955C>A (p.Pro319Thr) rs367543214 0.00001
NM_006906.2(PTPN5):c.1253C>T (p.Ala418Val) rs367543224 0.00001
NM_006906.2(PTPN5):c.1338T>A (p.Thr446=) rs367543222 0.00001
NM_006906.2(PTPN5):c.1584G>A (p.Thr528=) rs367543221 0.00001
NM_006906.2(PTPN5):c.627C>T (p.Asp209=) rs367543230 0.00001
NM_013964.5(NRG1):c.1005T>C (p.Ser335=) rs367543166 0.00001
NM_013964.5(NRG1):c.140C>T (p.Ser47Leu) rs367543160 0.00001
NM_013964.5(NRG1):c.30A>C (p.Lys10Asn) rs367543159 0.00001
NM_013964.5(NRG1):c.857G>A (p.Arg286Gln) rs367543164 0.00001
NM_018662.3(DISC1):c.1363C>T (p.Arg455Ter) rs367543089 0.00001
NM_018662.3(DISC1):c.2215G>A (p.Glu739Lys) rs367543096 0.00001
NM_018662.3(DISC1):c.2221A>G (p.Lys741Glu) rs367543097 0.00001
NM_018662.3(DISC1):c.841G>A (p.Ala281Thr) rs367543086 0.00001
NM_032122.5(DTNBP1):c.324C>T (p.Ile108=) rs367543105 0.00001
NM_032122.5(DTNBP1):c.654T>G (p.Ile218Met) rs367543104 0.00001
NM_032595.5(PPP1R9B):c.1074G>C (p.Ala358=) rs367543191 0.00001
NM_032595.5(PPP1R9B):c.1131G>A (p.Glu377=) rs367543187 0.00001
NM_032595.5(PPP1R9B):c.1582G>A (p.Val528Ile) rs367543186 0.00001
NM_032595.5(PPP1R9B):c.2199G>T (p.Leu733=) rs367543184 0.00001
NM_032595.5(PPP1R9B):c.2358G>A (p.Ser786=) rs367543182 0.00001
NM_032595.5(PPP1R9B):c.253C>T (p.Arg85Trp) rs367543205 0.00001
NM_172370.5(DAOA):c.271C>T (p.Pro91Ser) rs367543080 0.00001
NM_198291.3(SRC):c.1387C>T (p.Arg463Trp) rs367543247 0.00001
NM_198291.3(SRC):c.61G>A (p.Ala21Thr) rs367543238 0.00001
NM_198291.3(SRC):c.642C>T (p.Gly214=) rs367543240 0.00001
NM_000744.7(CHRNA4):c.1002G>A (p.Ser334=) rs121912263
NM_000744.7(CHRNA4):c.1066C>T (p.Leu356Phe) rs121912265
NM_000744.7(CHRNA4):c.1200C>T (p.Ser400=) rs121912270
NM_000744.7(CHRNA4):c.1311T>C (p.Ala437=) rs121912275
NM_000744.7(CHRNA4):c.705T>C (p.Tyr235=) rs121912251
NM_000744.7(CHRNA4):c.707C>T (p.Ala236Val) rs121912252
NM_000744.7(CHRNA4):c.753C>T (p.Ile251=) rs121912254
NM_000744.7(CHRNA4):c.775T>C (p.Cys259Arg) rs121912255
NM_000744.7(CHRNA4):c.799C>T (p.Leu267=) rs121912256
NM_000744.7(CHRNA4):c.953C>T (p.Thr318Ile) rs121912260
NM_000834.5(GRIN2B):c.465C>A (p.Ser155=) rs115189840
NM_001134407.3(GRIN2A):c.1362A>G (p.Lys454=) rs367543144
NM_001134407.3(GRIN2A):c.1557T>C (p.Ser519=) rs367543143
NM_001134407.3(GRIN2A):c.1749A>G (p.Gly583=) rs367543141
NM_001134407.3(GRIN2A):c.205G>A (p.Val69Met) rs367543128
NM_001134407.3(GRIN2A):c.2199A>G (p.Ala733=) rs367543139
NM_001134407.3(GRIN2A):c.2639A>G (p.Lys880Arg) rs367543137
NM_001134407.3(GRIN2A):c.2657A>G (p.Asn886Ser) rs367543136
NM_001134407.3(GRIN2A):c.3413A>T (p.Asn1138Ile) rs367543135
NM_001134407.3(GRIN2A):c.3647G>C (p.Ser1216Thr) rs367543134
NM_001134407.3(GRIN2A):c.3700T>G (p.Phe1234Val) rs367543133
NM_001134407.3(GRIN2A):c.420G>A (p.Pro140=) rs367543126
NM_001134407.3(GRIN2A):c.730C>T (p.Arg244Cys) rs367543123
NM_001134407.3(GRIN2A):c.909A>G (p.Ala303=) rs367543121
NM_001135179.2(ZDHHC3):c.147C>T (p.Ile49=) rs367543250
NM_001135179.2(ZDHHC3):c.617G>C (p.Ser206Thr) rs367543249
NM_001159995.3(NRG1):c.37+564G>A rs367543150
NM_001159995.3(NRG1):c.37+564G>C rs367543150
NM_002037.5(FYN):c.862+530G>A rs367543109
NM_002037.5(FYN):c.944C>G (p.Ala315Gly) rs367543108
NM_002709.3(PPP1CB):c.10G>A (p.Gly4Arg) rs367543173
NM_002709.3(PPP1CB):c.6G>A (p.Ala2=) rs367543172
NM_002710.4(PPP1CC):c.6G>T (p.Ala2=) rs367543177
NM_002739.5(PRKCG):c.1948G>T (p.Ala650Ser) rs367543220
NM_002739.5(PRKCG):c.683T>C (p.Val228Ala) rs367543209
NM_002739.5(PRKCG):c.807G>A (p.Ala269=) rs367543211
NM_002739.5(PRKCG):c.862G>A (p.Val288Met) rs367543213
NM_006906.2(PTPN5):c.1203C>T (p.Ile401=) rs367543225
NM_006906.2(PTPN5):c.467T>C (p.Val156Ala) rs367543232
NM_006906.2(PTPN5):c.768G>A (p.Pro256=) rs367543229
NM_006906.2(PTPN5):c.866A>G (p.Glu289Gly) rs367543227
NM_007327.4(GRIN1):c.1325C>T (p.Thr442Met) rs367543113
NM_007327.4(GRIN1):c.2064C>G (p.Ser688=) rs367543115
NM_007327.4(GRIN1):c.2563G>A (p.Val855Ile) rs367543118
NM_007327.4(GRIN1):c.2637A>G (p.Thr879=) rs367543119
NM_007327.4(GRIN1):c.813C>T (p.Leu271=) rs367543112
NM_013964.5(NRG1):c.835C>G (p.Arg279Gly) rs367543163
NM_013964.5(NRG1):c.893A>G (p.His298Arg) rs367543165
NM_018662.3(DISC1):c.1286C>G (p.Thr429Ser) rs367543087
NM_018662.3(DISC1):c.1291A>G (p.Thr431Ala) rs367543088
NM_018662.3(DISC1):c.1401A>G (p.Lys467=) rs367543090
NM_018662.3(DISC1):c.340A>T (p.Thr114Ser) rs367543083
NM_018662.3(DISC1):c.472G>A (p.Ala158Thr) rs367543084
NM_018662.3(DISC1):c.54G>A (p.Val18=) rs367543082
NM_032192.4(PPP1R1B):c.493C>A (p.Arg165Ser) rs367543181
NM_032595.5(PPP1R9B):c.1047A>G (p.Gln349=) rs367543194
NM_032595.5(PPP1R9B):c.1059G>C (p.Glu353Asp) rs367543193
NM_032595.5(PPP1R9B):c.1071G>A (p.Ala357=) rs367543192
NM_032595.5(PPP1R9B):c.1077A>G (p.Val359=) rs367543190
NM_032595.5(PPP1R9B):c.1092G>A (p.Arg364=) rs367543189
NM_032595.5(PPP1R9B):c.198G>C (p.Thr66=) rs367543206
NM_032595.5(PPP1R9B):c.513G>A (p.Leu171=) rs367543200
NM_032595.5(PPP1R9B):c.579C>G (p.Thr193=) rs367543199
NM_032595.5(PPP1R9B):c.631C>T (p.Leu211Phe) rs367543198
NM_032595.5(PPP1R9B):c.729G>A (p.Leu243=) rs367543197
NM_032595.5(PPP1R9B):c.777C>G (p.Pro259=) rs367543196
NM_032595.5(PPP1R9B):c.815G>C (p.Cys272Ser) rs367543195
NM_172370.5(DAOA):c.126C>G (p.Asn42Lys) rs367543078
NM_172370.5(DAOA):c.253G>T (p.Val85Phe) rs367543079
NM_198291.3(SRC):c.1200C>T (p.Asn400=) rs367543243
NM_198291.3(SRC):c.1239C>T (p.Leu413=) rs367543244
NM_198291.3(SRC):c.1474G>A (p.Glu492Lys) rs367543248
NM_198291.3(SRC):c.85G>T (p.Gly29Trp) rs367543239

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