ClinVar Miner

List of variants in gene MSH3 reported as likely benign by Center for Genomic Medicine, Rigshospitalet, Copenhagen University Hospital

Minimum submission review status: Collection method:
Minimum conflict level:
Gene type:
ClinVar version:
Total variants: 115
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HGVS dbSNP gnomAD frequency
NM_002439.5(MSH3):c.2254-19T>G rs41562717 0.00405
NM_002439.5(MSH3):c.1896+18C>T rs150904071 0.00330
NM_002439.5(MSH3):c.2511G>A (p.Leu837=) rs149628160 0.00270
NM_002439.5(MSH3):c.1887T>C (p.Tyr629=) rs139201310 0.00193
NM_002439.5(MSH3):c.1992G>A (p.Gln664=) rs144019582 0.00143
NM_002439.5(MSH3):c.792+8G>A rs147777411 0.00136
NM_002439.5(MSH3):c.1794G>A (p.Ser598=) rs61753791 0.00130
NM_002439.5(MSH3):c.2318+11A>G rs200378976 0.00111
NM_002439.5(MSH3):c.2436-13G>T rs372204576 0.00075
NM_002439.5(MSH3):c.356C>T (p.Ser119Phe) rs144607594 0.00028
NM_002439.5(MSH3):c.2685C>T (p.Thr895=) rs61753792 0.00024
NM_002439.5(MSH3):c.1174-12A>G rs202083881 0.00021
NM_002439.5(MSH3):c.359-33A>G rs370734697 0.00016
NM_002439.5(MSH3):c.1194C>T (p.Gly398=) rs141118996 0.00013
NM_002439.5(MSH3):c.2010C>T (p.Thr670=) rs201724154 0.00010
NM_002439.5(MSH3):c.1028-30A>G rs56116918 0.00007
NM_002439.5(MSH3):c.3131-17C>T rs369935724 0.00007
NM_002439.5(MSH3):c.1340+31C>T rs573277887 0.00005
NM_002439.5(MSH3):c.2235G>A (p.Val745=) rs761801255 0.00004
NM_002439.5(MSH3):c.1365C>T (p.Val455=) rs771995449 0.00003
NM_002439.5(MSH3):c.1897-41T>C rs767911868 0.00003
NM_002439.5(MSH3):c.2084+9C>T rs752910192 0.00003
NM_002439.5(MSH3):c.2172C>T (p.Asp724=) rs541680738 0.00003
NM_002439.5(MSH3):c.3231T>C (p.Asp1077=) rs529394454 0.00003
NM_002439.5(MSH3):c.792+31T>G rs752928843 0.00003
NM_002439.5(MSH3):c.1028-6T>C rs769258876 0.00002
NM_002439.5(MSH3):c.2160A>G (p.Gln720=) rs774324304 0.00002
NM_002439.5(MSH3):c.2748T>C (p.Ala916=) rs771253300 0.00002
NM_002439.5(MSH3):c.3001-9T>C rs1004547624 0.00002
NM_002439.5(MSH3):c.888C>T (p.Arg296=) rs555948314 0.00002
NM_002439.5(MSH3):c.1149G>A (p.Lys383=) rs776871293 0.00001
NM_002439.5(MSH3):c.1293C>T (p.Ala431=) rs760654110 0.00001
NM_002439.5(MSH3):c.1340+6T>C rs749448458 0.00001
NM_002439.5(MSH3):c.1584A>G (p.Leu528=) rs1262725129 0.00001
NM_002439.5(MSH3):c.1897-15del rs750269580 0.00001
NM_002439.5(MSH3):c.1935A>G (p.Leu645=) rs1164830782 0.00001
NM_002439.5(MSH3):c.2436-3T>C rs374901174 0.00001
NM_002439.5(MSH3):c.2571T>A (p.Ile857=) rs781196482 0.00001
NM_002439.5(MSH3):c.2813+34G>T rs780197668 0.00001
NM_002439.5(MSH3):c.2813+9G>A rs369244653 0.00001
NM_002439.5(MSH3):c.3303-16T>G rs767324024 0.00001
NM_002439.5(MSH3):c.359-36A>G rs762161316 0.00001
NM_002439.5(MSH3):c.558G>A (p.Ser186=) rs760604405 0.00001
NM_002439.5(MSH3):c.690G>A (p.Thr230=) rs751177946 0.00001
NM_002439.5(MSH3):c.840T>C (p.Phe280=) rs1255740947 0.00001
NM_002439.5(MSH3):c.1028-27T>C
NM_002439.5(MSH3):c.1028-38A>G
NM_002439.5(MSH3):c.1039C>T (p.Leu347=) rs1580553623
NM_002439.5(MSH3):c.1173+40A>G
NM_002439.5(MSH3):c.1174-15del rs1749901361
NM_002439.5(MSH3):c.1174-38C>A rs771276196
NM_002439.5(MSH3):c.1329C>T (p.Ala443=) rs2112819215
NM_002439.5(MSH3):c.1340+12C>T
NM_002439.5(MSH3):c.1340+32G>A
NM_002439.5(MSH3):c.1340+40A>C
NM_002439.5(MSH3):c.1341-12T>C
NM_002439.5(MSH3):c.1354A>C (p.Arg452=) rs760735926
NM_002439.5(MSH3):c.1454-20_1454-17del
NM_002439.5(MSH3):c.1454-22G>A
NM_002439.5(MSH3):c.1454-37_1454-36del
NM_002439.5(MSH3):c.1454-5del rs780632399
NM_002439.5(MSH3):c.1568+37T>A rs2112858051
NM_002439.5(MSH3):c.1569-44T>G rs2112866679
NM_002439.5(MSH3):c.1653+35C>T
NM_002439.5(MSH3):c.1653+36G>A rs199963081
NM_002439.5(MSH3):c.1763+31C>A
NM_002439.5(MSH3):c.1763+40T>C
NM_002439.5(MSH3):c.1764-32_1764-31del rs2112879762
NM_002439.5(MSH3):c.1764-40C>G rs1232664738
NM_002439.5(MSH3):c.1764-44A>C
NM_002439.5(MSH3):c.1764-9_1764-8del rs41559616
NM_002439.5(MSH3):c.1897-17A>C
NM_002439.5(MSH3):c.1897-38A>G
NM_002439.5(MSH3):c.1902T>C (p.Ser634=) rs1580033678
NM_002439.5(MSH3):c.2084+13C>T
NM_002439.5(MSH3):c.2084+43dup rs1561471371
NM_002439.5(MSH3):c.2085-30A>C
NM_002439.5(MSH3):c.2209C>T (p.Leu737=) rs1580035027
NM_002439.5(MSH3):c.2254-42T>C
NM_002439.5(MSH3):c.2254-47T>C
NM_002439.5(MSH3):c.2319-25A>G
NM_002439.5(MSH3):c.2319-42A>T
NM_002439.5(MSH3):c.2343C>T (p.His781=) rs1186259743
NM_002439.5(MSH3):c.237+29C>T
NM_002439.5(MSH3):c.237+30A>T
NM_002439.5(MSH3):c.237+33G>C
NM_002439.5(MSH3):c.237+38T>G
NM_002439.5(MSH3):c.237+40G>A
NM_002439.5(MSH3):c.237+42G>T rs2112798982
NM_002439.5(MSH3):c.237+45del rs985762586
NM_002439.5(MSH3):c.238-37AG[3] rs2112801448
NM_002439.5(MSH3):c.2435+40A>C
NM_002439.5(MSH3):c.2436-31C>T
NM_002439.5(MSH3):c.2731T>C (p.Leu911=) rs753525389
NM_002439.5(MSH3):c.2781G>A (p.Ala927=) rs753651533
NM_002439.5(MSH3):c.2813+24A>G
NM_002439.5(MSH3):c.2813+38A>G
NM_002439.5(MSH3):c.3000+9C>T rs2112106737
NM_002439.5(MSH3):c.3009C>T (p.Ser1003=) rs747106832
NM_002439.5(MSH3):c.3027C>T (p.Thr1009=) rs145319344
NM_002439.5(MSH3):c.3036G>A (p.Pro1012=) rs190963296
NM_002439.5(MSH3):c.3078G>A (p.Gly1026=) rs1159636129
NM_002439.5(MSH3):c.3130+23G>T rs750474686
NM_002439.5(MSH3):c.3130+37T>A
NM_002439.5(MSH3):c.3131-23G>C
NM_002439.5(MSH3):c.3131-41G>A
NM_002439.5(MSH3):c.3302+15G>C rs2112129041
NM_002439.5(MSH3):c.3302+28A>G
NM_002439.5(MSH3):c.3303-16T>C rs767324024
NM_002439.5(MSH3):c.358+12G>A rs777793971
NM_002439.5(MSH3):c.358+12G>T rs777793971
NM_002439.5(MSH3):c.358+28C>A rs2112801974
NM_002439.5(MSH3):c.359-25G>A
NM_002439.5(MSH3):c.579+43T>G
NM_002439.5(MSH3):c.792+9T>C

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