ClinVar Miner

Variants from Laboratory for Genotyping Development, RIKEN

Location: Japan  Primary collection method: research
Minimum submission review status: Collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than one submission, it may be counted in more than one significance column. If this is the case, the total number of variants will be less than the sum of the other cells.

pathogenic likely pathogenic uncertain significance likely benign benign total
518 0 0 0 0 518

Gene and significance breakdown #

Total genes and gene combinations: 32
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Gene or gene combination pathogenic total
BRCA2 90 90
ATM 55 55
BRCA1 31 31
MSH6 29 29
ATM, C11orf65 28 28
BRIP1 26 26
PALB2 26 26
NF1 20 20
BARD1 19 19
CHEK2 19 19
MUTYH 19 19
MSH2 14 14
TP53 14 14
APC 13 13
EPCAM 13 13
NBN 13 13
RAD51D, RAD51L3-RFFL 13 13
MLH1 11 11
RAD51C 11 11
CDH1 10 10
PMS2 10 10
PTEN 9 9
BRCA1, LOC126862571 8 8
HOXB13 6 6
MUTYH, TOE1 3 3
SMAD4 2 2
CDK4 1 1
CDKN2A 1 1
CDKN2A, LOC130001603 1 1
LOC126860438, NBN 1 1
LOC130062899, STK11 1 1
STK11 1 1

Condition and significance breakdown #

Total conditions: 1
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Condition pathogenic total
Gastric cancer 518 518

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