ClinVar Miner

Variants in gene ABCB11 with conflicting interpretations

Y axis minimum submission review status: Y axis collection method:
X axis minimum submission review status: X axis collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than two submissions, it may have multiple conflicts and therefore be counted in more than one conflict column. If this is the case, the "Variants with any kind of conflict" cell will be less than the sum of the conflicted variants cells to its left.

Variants with only 1 submission Variants with at least 2 submissions and no conflicts Variants with a synonymous conflict
(e.g. benign vs non-pathogenic)
Variants with a confidence conflict
(e.g. benign vs likely benign)
Variants with a benign or likely benign vs uncertain conflict Variants with a category conflict
(e.g. benign vs affects)
Variants with a clinically significant conflict
(e.g. benign vs pathogenic)
Variants with any kind of conflict
269 35 0 16 14 1 1 31

Significance breakdown #

In the table below, cells that correspond to a term paired with itself represent synonymous conflicts, i.e. variants that have been annotated with different terms that map to the same standard term. To compare the terms that were actually submitted, check the box in the filters section at the top of this page.

pathogenic likely pathogenic uncertain significance likely benign benign other
pathogenic 0 2 0 0 0 0
likely pathogenic 2 0 1 0 0 0
uncertain significance 0 1 0 14 1 0
likely benign 0 0 14 0 14 0
benign 0 0 1 14 0 1
other 0 0 0 0 1 0

All variants with conflicting interpretations #

Total variants: 31
Download table as spreadsheet
HGVS dbSNP
NM_003742.2(ABCB11):c.1966_1967delTT (p.Leu656Alafs) rs1064797270
NM_003742.3(ABCB11):c.2565A>G (p.Gly855=) rs1014304470
NM_003742.4(ABCB11):c.1124A>G (p.Asn375Ser) rs572222881
NM_003742.4(ABCB11):c.1185G>A (p.Glu395=) rs57509552
NM_003742.4(ABCB11):c.1281C>T (p.Phe427=) rs11568360
NM_003742.4(ABCB11):c.1460G>A (p.Arg487His) rs188824058
NM_003742.4(ABCB11):c.1605C>T (p.Ala535=) rs144848376
NM_003742.4(ABCB11):c.167C>T (p.Ser56Leu) rs11568361
NM_003742.4(ABCB11):c.1772A>G (p.Asn591Ser) rs11568367
NM_003742.4(ABCB11):c.1791G>T (p.Val597=) rs11568371
NM_003742.4(ABCB11):c.2012-8T>G rs769910565
NM_003742.4(ABCB11):c.2029A>G (p.Met677Val) rs11568364
NM_003742.4(ABCB11):c.2093G>A (p.Arg698His) rs138642043
NM_003742.4(ABCB11):c.2134T>C (p.Leu712=) rs191649793
NM_003742.4(ABCB11):c.2412A>G (p.Ala804=) rs11568373
NM_003742.4(ABCB11):c.2594C>T (p.Ala865Val) rs118109635
NM_003742.4(ABCB11):c.270T>C (p.Phe90=) rs4148777
NM_003742.4(ABCB11):c.279C>T (p.Tyr93=) rs375137002
NM_003742.4(ABCB11):c.2886A>G (p.Ala962=) rs201087979
NM_003742.4(ABCB11):c.2907G>A (p.Lys969=) rs201881755
NM_003742.4(ABCB11):c.2943C>T (p.Tyr981=) rs145720664
NM_003742.4(ABCB11):c.3258A>G (p.Thr1086=) rs11568359
NM_003742.4(ABCB11):c.3330G>A (p.Ala1110=) rs113099601
NM_003742.4(ABCB11):c.3556G>A (p.Glu1186Lys) rs1521808
NM_003742.4(ABCB11):c.3768G>A (p.Thr1256=) rs773371540
NM_003742.4(ABCB11):c.389+8G>A rs11568363
NM_003742.4(ABCB11):c.402C>T (p.Ile134=) rs11568377
NM_003742.4(ABCB11):c.408C>T (p.Ser136=) rs183214630
NM_003742.4(ABCB11):c.477A>G (p.Gln159=) rs191042013
NM_003742.4(ABCB11):c.851T>C (p.Val284Ala) rs200739891
NM_003742.4(ABCB11):c.930C>T (p.Phe310=) rs372382608

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