ClinVar Miner

Variants in gene ARID1A with conflicting interpretations

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Y axis minimum submission review status: Y axis collection method:
X axis minimum submission review status: X axis collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than two submissions, it may have multiple conflicts and therefore be counted in more than one conflict column. If this is the case, the "Variants with any kind of conflict" cell will be less than the sum of the conflicted variants cells to its left.

Variants with only 1 submission per condition Variants with at least 2 submissions on the same condition and no conflicts Variants with a synonymous conflict
(e.g. benign vs non-pathogenic) 		Variants with a confidence conflict
(e.g. benign vs likely benign) 		Variants with a benign or likely benign vs uncertain conflict Variants with a category conflict
(e.g. benign vs affects) 		Variants with a clinically significant conflict
(e.g. benign vs pathogenic) 		Variants with any conflict
1142 110 0 81 46 0 4 123

Significance breakdown #

In the table below, cells that correspond to a term paired with itself represent synonymous conflicts, i.e. variants that have been annotated with different terms that map to the same standard term. To compare the terms that were actually submitted, check the box in the filters section at the top of this page.

pathogenic likely pathogenic uncertain significance likely benign benign
pathogenic 0 1 1 0 0
likely pathogenic 1 0 3 0 0
uncertain significance 1 3 0 36 18
likely benign 0 0 36 0 80
benign 0 0 18 80 0

All variants with conflicting interpretations #

Total variants: 123
Download table as spreadsheet
HGVS dbSNP gnomAD frequency
NM_006015.6(ARID1A):c.5114A>G (p.Asn1705Ser) rs61756316 0.00698
NM_006015.6(ARID1A):c.358C>T (p.Pro120Ser) rs571264557 0.00572
NM_006015.6(ARID1A):c.6586C>T (p.Leu2196=) rs149633292 0.00468
NM_006015.6(ARID1A):c.1188C>T (p.Gly396=) rs61749356 0.00330
NM_006015.6(ARID1A):c.2541C>A (p.Ile847=) rs151274586 0.00329
NM_006015.6(ARID1A):c.318C>T (p.Asn106=) rs551186176 0.00196
NM_006015.6(ARID1A):c.135C>T (p.Ala45=) rs892415319 0.00162
NM_006015.6(ARID1A):c.5779G>C (p.Ala1927Pro) rs143257313 0.00131
NM_006015.6(ARID1A):c.5336A>G (p.Glu1779Gly) rs140946580 0.00112
NM_006015.6(ARID1A):c.4869G>A (p.Ser1623=) rs148936933 0.00106
NM_006015.6(ARID1A):c.4152C>T (p.His1384=) rs149908828 0.00100
NM_006015.6(ARID1A):c.472C>T (p.Pro158Ser) rs567246585 0.00088
NM_006015.6(ARID1A):c.2123A>C (p.Gln708Pro) rs367889013 0.00086
NM_006015.6(ARID1A):c.373G>A (p.Gly125Ser) rs536658556 0.00071
NM_006015.6(ARID1A):c.162C>T (p.Ala54=) rs1001634270 0.00068
NM_006015.6(ARID1A):c.3762C>T (p.Gly1254=) rs138814830 0.00060
NM_006015.6(ARID1A):c.3792C>T (p.Ala1264=) rs142429183 0.00059
NM_006015.6(ARID1A):c.4563C>T (p.Pro1521=) rs149095176 0.00058
NM_006015.6(ARID1A):c.1716G>A (p.Thr572=) rs147554664 0.00055
NM_006015.6(ARID1A):c.1266C>T (p.Tyr422=) rs144272459 0.00039
NM_006015.6(ARID1A):c.3242A>G (p.Asn1081Ser) rs148400981 0.00039
NM_006015.6(ARID1A):c.4560C>T (p.Gly1520=) rs138023869 0.00039
NM_006015.6(ARID1A):c.5076C>T (p.Asn1692=) rs149468118 0.00037
NM_006015.6(ARID1A):c.4779G>T (p.Arg1593=) rs140978841 0.00033
NM_006015.6(ARID1A):c.2074A>G (p.Ile692Val) rs146402512 0.00032
NM_006015.6(ARID1A):c.4879C>G (p.Pro1627Ala) rs151074395 0.00032
NM_006015.6(ARID1A):c.4053C>T (p.Gly1351=) rs200122106 0.00031
NM_006015.6(ARID1A):c.4702C>T (p.Pro1568Ser) rs113718290 0.00030
NM_006015.6(ARID1A):c.6659A>G (p.Asn2220Ser) rs139576809 0.00029
NM_006015.6(ARID1A):c.4347C>T (p.Gly1449=) rs140481844 0.00023
NM_006015.6(ARID1A):c.2139A>G (p.Pro713=) rs779283100 0.00022
NM_006015.6(ARID1A):c.1597C>T (p.Pro533Ser) rs200572766 0.00021
NM_006015.6(ARID1A):c.5491C>G (p.Leu1831Val) rs150534917 0.00020
NM_006015.6(ARID1A):c.2698G>A (p.Ala900Thr) rs138418893 0.00019
NM_006015.6(ARID1A):c.2718C>G (p.Asn906Lys) rs201864573 0.00016
NM_006015.6(ARID1A):c.110G>A (p.Gly37Asp) rs933617964 0.00013
NM_006015.6(ARID1A):c.405T>G (p.Pro135=) rs922780561 0.00013
NM_006015.6(ARID1A):c.2298G>A (p.Gln766=) rs572510196 0.00012
NM_006015.6(ARID1A):c.4542G>A (p.Thr1514=) rs560211386 0.00012
NM_006015.6(ARID1A):c.1175C>A (p.Pro392His) rs199906671 0.00011
NM_006015.6(ARID1A):c.5615C>T (p.Ala1872Val) rs191813608 0.00011
NM_006015.6(ARID1A):c.456A>G (p.Gln152=) rs1043397333 0.00010
NM_006015.6(ARID1A):c.3873G>T (p.Glu1291Asp) rs201904230 0.00009
NM_006015.6(ARID1A):c.4751A>G (p.Gln1584Arg) rs558739370 0.00008
NM_006015.6(ARID1A):c.501C>T (p.Ala167=) rs754018917 0.00008
NM_006015.6(ARID1A):c.268A>G (p.Ser90Gly) rs752026201 0.00007
NM_006015.6(ARID1A):c.3046G>A (p.Gly1016Ser) rs182858322 0.00007
NM_006015.6(ARID1A):c.3816G>A (p.Ala1272=) rs763151089 0.00007
NM_006015.6(ARID1A):c.1715C>T (p.Thr572Met) rs778345898 0.00006
NM_006015.6(ARID1A):c.372C>T (p.Gly124=) rs1005812119 0.00006
NM_006015.6(ARID1A):c.5246G>A (p.Arg1749Lys) rs370901533 0.00006
NM_006015.6(ARID1A):c.1329C>T (p.Gly443=) rs369923774 0.00005
NM_006015.6(ARID1A):c.148A>G (p.Met50Val) rs1216784088 0.00005
NM_006015.6(ARID1A):c.3967C>T (p.Arg1323Cys) rs587778051 0.00005
NM_006015.6(ARID1A):c.3972C>T (p.Tyr1324=) rs377622327 0.00005
NM_006015.6(ARID1A):c.5311C>T (p.Pro1771Ser) rs187631645 0.00005
NM_006015.6(ARID1A):c.111C>T (p.Gly37=) rs1057522894 0.00004
NM_006015.6(ARID1A):c.4081A>G (p.Met1361Val) rs770710220 0.00004
NM_006015.6(ARID1A):c.5647A>T (p.Thr1883Ser) rs150076443 0.00004
NM_006015.6(ARID1A):c.6711G>A (p.Ala2237=) rs542602060 0.00004
NM_006015.6(ARID1A):c.6720C>G (p.Ala2240=) rs776767678 0.00004
NM_006015.6(ARID1A):c.6730G>T (p.Val2244Leu) rs372878743 0.00004
NM_006015.6(ARID1A):c.1619C>T (p.Thr540Met) rs892173376 0.00003
NM_006015.6(ARID1A):c.376G>A (p.Gly126Ser) rs1400214289 0.00003
NM_006015.6(ARID1A):c.4064C>A (p.Pro1355His) rs1030686989 0.00003
NM_006015.6(ARID1A):c.4530C>T (p.Asn1510=) rs200313047 0.00003
NM_006015.6(ARID1A):c.480C>T (p.Ala160=) rs775784171 0.00003
NM_006015.6(ARID1A):c.4947A>G (p.Thr1649=) rs201700725 0.00003
NM_006015.6(ARID1A):c.5753G>A (p.Arg1918Gln) rs369532498 0.00003
NM_006015.6(ARID1A):c.6331G>A (p.Val2111Ile) rs770028290 0.00003
NM_006015.6(ARID1A):c.1791C>T (p.Phe597=) rs375210036 0.00002
NM_006015.6(ARID1A):c.2328T>C (p.Pro776=) rs564495050 0.00002
NM_006015.6(ARID1A):c.36C>T (p.Ser12=) rs112262001 0.00002
NM_006015.6(ARID1A):c.5849G>A (p.Arg1950Gln) rs759215669 0.00002
NM_006015.6(ARID1A):c.6613G>A (p.Ala2205Thr) rs141992367 0.00002
NM_006015.6(ARID1A):c.6785C>T (p.Ser2262Leu) rs375849292 0.00002
NM_006015.6(ARID1A):c.193C>G (p.Pro65Ala) rs1429977258 0.00001
NM_006015.6(ARID1A):c.239A>G (p.Asn80Ser) rs1553145891 0.00001
NM_006015.6(ARID1A):c.2512G>A (p.Gly838Arg) rs753334968 0.00001
NM_006015.6(ARID1A):c.2668A>G (p.Met890Val) rs140664170 0.00001
NM_006015.6(ARID1A):c.437C>T (p.Pro146Leu) rs781072025 0.00001
NM_006015.6(ARID1A):c.4669C>G (p.Pro1557Ala) rs778655919 0.00001
NM_006015.6(ARID1A):c.6070C>T (p.Arg2024Trp) rs2081175768 0.00001
NM_006015.6(ARID1A):c.6709G>A (p.Ala2237Thr) rs746165075 0.00001
NM_006015.6(ARID1A):c.114GGC[6] (p.Ala45dup) rs587779737
NM_006015.6(ARID1A):c.1483C>A (p.His495Asn) rs1425323176
NM_006015.6(ARID1A):c.1649C>A (p.Pro550His) rs761975620
NM_006015.6(ARID1A):c.1753CAG[1] (p.Gln586del) rs777762320
NM_006015.6(ARID1A):c.1883T>C (p.Met628Thr) rs927444249
NM_006015.6(ARID1A):c.196C>T (p.Pro66Ser) rs962566886
NM_006015.6(ARID1A):c.2109C>A (p.Pro703=) rs200927747
NM_006015.6(ARID1A):c.249CGG[5] (p.Gly87_Ala88insGly) rs1015322780
NM_006015.6(ARID1A):c.249CGG[6] (p.Gly86_Gly87dup) rs1015322780
NM_006015.6(ARID1A):c.250_267del (p.Gly84_Gly89del) rs777773061
NM_006015.6(ARID1A):c.261_278del (p.Ala88_Gly93del) rs749452696
NM_006015.6(ARID1A):c.264C>T (p.Ala88=) rs765913797
NM_006015.6(ARID1A):c.2735C>T (p.Pro912Leu)
NM_006015.6(ARID1A):c.281C>T (p.Pro94Leu) rs1314991058
NM_006015.6(ARID1A):c.3230C>A (p.Ala1077Glu) rs1030084592
NM_006015.6(ARID1A):c.326C>T (p.Pro109Leu) rs1167372383
NM_006015.6(ARID1A):c.3978GCA[9] (p.Gln1334dup) rs374564889
NM_006015.6(ARID1A):c.4114C>T (p.Pro1372Ser) rs745873673
NM_006015.6(ARID1A):c.4348G>A (p.Gly1450Ser) rs1330309030
NM_006015.6(ARID1A):c.439G>C (p.Ala147Pro) rs2080267597
NM_006015.6(ARID1A):c.448T>C (p.Phe150Leu) rs2080267793
NM_006015.6(ARID1A):c.4768C>T (p.Pro1590Ser) rs370907880
NM_006015.6(ARID1A):c.483CGC[5] (p.Ala167dup) rs759913677
NM_006015.6(ARID1A):c.488C>T (p.Ala163Val) rs2080268991
NM_006015.6(ARID1A):c.48GCC[4] (p.Pro21del) rs748085214
NM_006015.6(ARID1A):c.48GCC[7] (p.Pro20_Pro21dup) rs748085214
NM_006015.6(ARID1A):c.4994-4dup rs2124126066
NM_006015.6(ARID1A):c.5125C>T (p.Leu1709Phe) rs2081163988
NM_006015.6(ARID1A):c.5287GAA[4] (p.Glu1767del) rs753766136
NM_006015.6(ARID1A):c.5303T>C (p.Leu1768Pro) rs1302313826
NM_006015.6(ARID1A):c.5438C>T (p.Pro1813Leu) rs1373371414
NM_006015.6(ARID1A):c.5717G>A (p.Arg1906Gln) rs41303631
NM_006015.6(ARID1A):c.5719A>T (p.Ile1907Phe) rs139230162
NM_006015.6(ARID1A):c.581C>T (p.Pro194Leu) rs764060744
NM_006015.6(ARID1A):c.6099GGA[2] (p.Glu2036del) rs2081176133
NM_006015.6(ARID1A):c.6612C>T (p.Ala2204=) rs752465350
NM_006015.6(ARID1A):c.6652A>T (p.Met2218Leu) rs760749276
NM_006015.6(ARID1A):c.67G>T (p.Glu23Ter) rs1557569082
NM_006015.6(ARID1A):c.98_107del (p.Glu33fs) rs2124740134

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