ClinVar Miner

Variants in gene FARS2 with conflicting interpretations

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Y axis minimum submission review status: Y axis collection method:
X axis minimum submission review status: X axis collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than two submissions, it may have multiple conflicts and therefore be counted in more than one conflict column. If this is the case, the "Variants with any kind of conflict" cell will be less than the sum of the conflicted variants cells to its left.

Variants with only 1 submission per condition Variants with at least 2 submissions on the same condition and no conflicts Variants with a synonymous conflict
(e.g. benign vs non-pathogenic)
Variants with a confidence conflict
(e.g. benign vs likely benign)
Variants with a benign or likely benign vs uncertain conflict Variants with a category conflict
(e.g. benign vs affects)
Variants with a clinically significant conflict
(e.g. benign vs pathogenic)
Variants with any conflict
211 18 0 15 4 0 6 23

Significance breakdown #

In the table below, cells that correspond to a term paired with itself represent synonymous conflicts, i.e. variants that have been annotated with different terms that map to the same standard term. To compare the terms that were actually submitted, check the box in the filters section at the top of this page.

pathogenic likely pathogenic uncertain significance likely benign benign
pathogenic 0 8 3 0 0
likely pathogenic 8 0 3 0 0
uncertain significance 3 3 0 4 1
likely benign 0 0 4 0 7
benign 0 0 1 7 0

All variants with conflicting interpretations #

Total variants: 23
Download table as spreadsheet
HGVS dbSNP
NM_006567.5(FARS2):c.1082C>T (p.Pro361Leu) rs751459058
NM_006567.5(FARS2):c.1172A>T (p.Asp391Val) rs397514612
NM_006567.5(FARS2):c.1255C>T (p.Arg419Cys) rs775690041
NM_006567.5(FARS2):c.170C>G (p.Ser57Cys) rs34382405
NM_006567.5(FARS2):c.253C>G (p.Pro85Ala) rs770035560
NM_006567.5(FARS2):c.407C>A (p.Pro136His) rs199863563
NM_006567.5(FARS2):c.431A>G (p.Tyr144Cys) rs397514610
NM_006567.5(FARS2):c.461C>T (p.Ala154Val) rs749588235
NM_006567.5(FARS2):c.462G>T (p.Ala154=) rs150477330
NM_006567.5(FARS2):c.467C>T (p.Thr156Met) rs146988468
NM_006567.5(FARS2):c.506A>T (p.Asp169Val) rs146356199
NM_006567.5(FARS2):c.515TGG[2] (p.Val174del) rs1554169392
NM_006567.5(FARS2):c.606G>A (p.Lys202=) rs17851782
NM_006567.5(FARS2):c.667C>T (p.Arg223Cys) rs202060864
NM_006567.5(FARS2):c.676C>T (p.His226Tyr) rs201991648
NM_006567.5(FARS2):c.737C>T (p.Thr246Met) rs116567033
NM_006567.5(FARS2):c.768A>C (p.Gly256=) rs200003967
NM_006567.5(FARS2):c.819T>A (p.Pro273=) rs201042275
NM_006567.5(FARS2):c.873C>T (p.Cys291=) rs372301183
NM_006567.5(FARS2):c.925G>A (p.Gly309Ser) rs746746116
NM_006567.5(FARS2):c.973G>T (p.Asp325Tyr) rs764427452
NM_006567.5(FARS2):c.986T>C (p.Ile329Thr) rs397514611
NM_006567.5(FARS2):c.989G>A (p.Arg330His) rs863223957

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