ClinVar Miner

Variants in gene FOXG1 with conflicting interpretations

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Y axis minimum submission review status: Y axis collection method:
X axis minimum submission review status: X axis collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than two submissions, it may have multiple conflicts and therefore be counted in more than one conflict column. If this is the case, the "Variants with any kind of conflict" cell will be less than the sum of the conflicted variants cells to its left.

Variants with only 1 submission per condition Variants with at least 2 submissions on the same condition and no conflicts Variants with a synonymous conflict
(e.g. benign vs non-pathogenic)
Variants with a confidence conflict
(e.g. benign vs likely benign)
Variants with a benign or likely benign vs uncertain conflict Variants with a category conflict
(e.g. benign vs affects)
Variants with a clinically significant conflict
(e.g. benign vs pathogenic)
Variants with any conflict
309 50 0 11 22 0 2 31

Significance breakdown #

In the table below, cells that correspond to a term paired with itself represent synonymous conflicts, i.e. variants that have been annotated with different terms that map to the same standard term. To compare the terms that were actually submitted, check the box in the filters section at the top of this page.

pathogenic likely pathogenic uncertain significance likely benign benign
pathogenic 0 2 0 0 0
likely pathogenic 2 0 2 0 0
uncertain significance 0 2 0 18 8
likely benign 0 0 18 0 9
benign 0 0 8 9 0

All variants with conflicting interpretations #

Total variants: 31
Download table as spreadsheet
NM_005249.5(FOXG1):c.*4C>T rs774917687
NM_005249.5(FOXG1):c.1045T>G (p.Ser349Ala) rs796052472
NM_005249.5(FOXG1):c.1086G>A (p.Leu362=) rs570981209
NM_005249.5(FOXG1):c.1119G>A (p.Pro373=) rs538358023
NM_005249.5(FOXG1):c.1161G>A (p.Ser387=) rs147154860
NM_005249.5(FOXG1):c.1273T>C (p.Ser425Pro) rs780242359
NM_005249.5(FOXG1):c.1278G>A (p.Met426Ile) rs747138265
NM_005249.5(FOXG1):c.1323C>T (p.Ser441=) rs144434028
NM_005249.5(FOXG1):c.141CCA[6] (p.His57del) rs587783630
NM_005249.5(FOXG1):c.141CCA[8] (p.His57dup) rs587783630
NM_005249.5(FOXG1):c.194CGC[6] (p.Pro69dup) rs761703699
NM_005249.5(FOXG1):c.209AGC[5] (p.Gln73dup) rs398124201
NM_005249.5(FOXG1):c.209_229del (p.Gln70_Pro76del) rs1466028633
NM_005249.5(FOXG1):c.209_235del (p.Gln70_Pro78del) rs587783634
NM_005249.5(FOXG1):c.209_235dup (p.Gln70_Pro78dup) rs587783634
NM_005249.5(FOXG1):c.218A>C (p.Gln73Pro) rs760663911
NM_005249.5(FOXG1):c.219GCC[7] (p.Pro80dup) rs786200975
NM_005249.5(FOXG1):c.245C>A (p.Pro82Gln) rs796052453
NM_005249.5(FOXG1):c.251C>A (p.Pro84His) rs866815665
NM_005249.5(FOXG1):c.256C>A (p.Gln86Lys) rs398124202
NM_005249.5(FOXG1):c.256C>T (p.Gln86Ter) rs398124202
NM_005249.5(FOXG1):c.326C>T (p.Pro109Leu) rs398124203
NM_005249.5(FOXG1):c.447C>T (p.Ala149=) rs112803404
NM_005249.5(FOXG1):c.456G>T (p.Gly152=) rs587783637
NM_005249.5(FOXG1):c.489C>T (p.Gly163=) rs375378714
NM_005249.5(FOXG1):c.503G>C (p.Gly168Ala) rs148157138
NM_005249.5(FOXG1):c.565C>G (p.Leu189Val) rs1555321308
NM_005249.5(FOXG1):c.594C>G (p.Pro198=) rs141088742
NM_005249.5(FOXG1):c.610C>T (p.Leu204Phe) rs786205006
NM_005249.5(FOXG1):c.670G>A (p.Gly224Ser) rs727503935
NM_005249.5(FOXG1):c.672C>G (p.Gly224=) rs587783639

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