ClinVar Miner

Variants in gene FREM1 with conflicting interpretations

Y axis minimum submission review status: Y axis collection method:
X axis minimum submission review status: X axis collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than two submissions, it may have multiple conflicts and therefore be counted in more than one conflict column. If this is the case, the "Variants with any kind of conflict" cell will be less than the sum of the conflicted variants cells to its left.

Variants with only 1 submission Variants with at least 2 submissions and no conflicts Variants with a synonymous conflict
(e.g. benign vs non-pathogenic)
Variants with a confidence conflict
(e.g. benign vs likely benign)
Variants with a benign or likely benign vs uncertain conflict Variants with a category conflict
(e.g. benign vs affects)
Variants with a clinically significant conflict
(e.g. benign vs pathogenic)
Variants with any kind of conflict
184 16 0 8 7 0 1 14

Significance breakdown #

In the table below, cells that correspond to a term paired with itself represent synonymous conflicts, i.e. variants that have been annotated with different terms that map to the same standard term. To compare the terms that were actually submitted, check the box in the filters section at the top of this page.

pathogenic likely pathogenic uncertain significance likely benign benign
pathogenic 0 1 1 1 0
likely pathogenic 1 0 0 0 0
uncertain significance 1 0 0 5 3
likely benign 1 0 5 0 7
benign 0 0 3 7 0

All variants with conflicting interpretations #

Total variants: 14
Download table as spreadsheet
NM_144966.5(FREM1):c.1394G>C (p.Gly465Ala) rs41298151
NM_144966.5(FREM1):c.1464C>T (p.Ser488=) rs200064797
NM_144966.5(FREM1):c.1493G>A (p.Arg498Gln) rs184394424
NM_144966.5(FREM1):c.2169+11A>C rs377670533
NM_144966.5(FREM1):c.2274C>A (p.Gly758=) rs12235714
NM_144966.5(FREM1):c.3575G>A (p.Arg1192His) rs79023327
NM_144966.5(FREM1):c.3971T>G (p.Leu1324Arg) rs281875281
NM_144966.5(FREM1):c.4466G>A (p.Arg1489Gln) rs61732355
NM_144966.5(FREM1):c.4617G>A (p.Ala1539=) rs2131880
NM_144966.5(FREM1):c.4711G>A (p.Asp1571Asn) rs115421185
NM_144966.5(FREM1):c.4727A>T (p.Asn1576Ile) rs2101770
NM_144966.5(FREM1):c.5335-19dup rs140882884
NM_144966.5(FREM1):c.5622G>C (p.Trp1874Cys) rs61745612
NM_144966.5(FREM1):c.5859T>C (p.Val1953=) rs4741426

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