ClinVar Miner

Variants in gene GATA2 with conflicting interpretations

Y axis minimum submission review status: Y axis collection method:
X axis minimum submission review status: X axis collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than two submissions, it may have multiple conflicts and therefore be counted in more than one conflict column. If this is the case, the "Variants with any kind of conflict" cell will be less than the sum of the conflicted variants cells to its left.

Variants with only 1 submission Variants with at least 2 submissions and no conflicts Variants with a synonymous conflict
(e.g. benign vs non-pathogenic)
Variants with a confidence conflict
(e.g. benign vs likely benign)
Variants with a benign or likely benign vs uncertain conflict Variants with a category conflict
(e.g. benign vs affects)
Variants with a clinically significant conflict
(e.g. benign vs pathogenic)
Variants with any kind of conflict
264 14 0 15 3 1 0 18

Significance breakdown #

In the table below, cells that correspond to a term paired with itself represent synonymous conflicts, i.e. variants that have been annotated with different terms that map to the same standard term. To compare the terms that were actually submitted, check the box in the filters section at the top of this page.

pathogenic likely pathogenic uncertain significance likely benign benign risk factor
pathogenic 0 3 0 0 0 1
likely pathogenic 3 0 0 0 0 1
uncertain significance 0 0 0 3 0 0
likely benign 0 0 3 0 12 0
benign 0 0 0 12 0 0
risk factor 1 1 0 0 0 0

All variants with conflicting interpretations #

Total variants: 18
Download table as spreadsheet
HGVS dbSNP
NM_001145661.2(GATA2):c.*183C>T rs45598538
NM_001145661.2(GATA2):c.1021_1024dup (p.Ala342fs) rs869320770
NM_001145661.2(GATA2):c.1035C>T (p.Ala345=) rs371599112
NM_001145661.2(GATA2):c.1061C>T (p.Thr354Met) rs387906631
NM_001145661.2(GATA2):c.114G>A (p.Gln38=) rs775573177
NM_001145661.2(GATA2):c.1192C>T (p.Arg398Trp) rs387906629
NM_001145661.2(GATA2):c.121C>G (p.Pro41Ala) rs143590990
NM_001145661.2(GATA2):c.1233G>A (p.Ala411=) rs34172218
NM_001145661.2(GATA2):c.1326C>T (p.His442=) rs886057929
NM_001145661.2(GATA2):c.333C>T (p.His111=) rs148554346
NM_001145661.2(GATA2):c.480C>T (p.Thr160=) rs199640729
NM_001145661.2(GATA2):c.481C>G (p.Pro161Ala) rs34799090
NM_001145661.2(GATA2):c.490G>A (p.Ala164Thr) rs2335052
NM_001145661.2(GATA2):c.564G>C (p.Thr188=) rs34870876
NM_001145661.2(GATA2):c.66C>G (p.Pro22=) rs113384352
NM_001145661.2(GATA2):c.710G>A (p.Gly237Asp) rs191501191
NM_001145661.2(GATA2):c.748C>G (p.Pro250Ala) rs78245253
NM_032638.4(GATA2):c.-276T>G rs563914744

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