ClinVar Miner

Variants in gene GPD1L with conflicting interpretations

Y axis minimum submission review status: Y axis collection method:
X axis minimum submission review status: X axis collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than two submissions, it may have multiple conflicts and therefore be counted in more than one conflict column. If this is the case, the "Variants with any kind of conflict" cell will be less than the sum of the conflicted variants cells to its left.

Variants with only 1 submission Variants with at least 2 submissions and no conflicts Variants with a synonymous conflict
(e.g. benign vs non-pathogenic)
Variants with a confidence conflict
(e.g. benign vs likely benign)
Variants with a benign or likely benign vs uncertain conflict Variants with a category conflict
(e.g. benign vs affects)
Variants with a clinically significant conflict
(e.g. benign vs pathogenic)
Variants with any kind of conflict
134 12 0 10 4 0 4 16

Significance breakdown #

In the table below, cells that correspond to a term paired with itself represent synonymous conflicts, i.e. variants that have been annotated with different terms that map to the same standard term. To compare the terms that were actually submitted, check the box in the filters section at the top of this page.

pathogenic likely pathogenic uncertain significance likely benign benign
pathogenic 0 1 3 1 1
likely pathogenic 1 0 1 0 0
uncertain significance 3 1 0 4 0
likely benign 1 0 4 0 9
benign 1 0 0 9 0

All variants with conflicting interpretations #

Total variants: 16
Download table as spreadsheet
HGVS dbSNP
NM_015141.3(GPD1L):c.247G>A (p.Glu83Lys) rs72552292
NM_015141.3(GPD1L):c.366+8G>A rs72546650
NM_015141.3(GPD1L):c.370A>G (p.Ile124Val) rs72552293
NM_015141.3(GPD1L):c.396G>A (p.Lys132=) rs61741845
NM_015141.3(GPD1L):c.408C>T (p.Asp136=) rs9835387
NM_015141.3(GPD1L):c.465C>T (p.Ala155=) rs113645050
NM_015141.3(GPD1L):c.520G>A (p.Glu174Lys) rs112122950
NM_015141.3(GPD1L):c.573C>G (p.Thr191=) rs72558073
NM_015141.3(GPD1L):c.651C>T (p.Asp217=) rs149641866
NM_015141.3(GPD1L):c.691C>T (p.Arg231Cys) rs143486835
NM_015141.3(GPD1L):c.813G>T (p.Arg271=) rs35464343
NM_015141.3(GPD1L):c.817C>T (p.Arg273Cys) rs72552294
NM_015141.3(GPD1L):c.81T>C (p.Asn27=) rs34278284
NM_015141.3(GPD1L):c.839C>T (p.Ala280Val) rs72552291
NM_015141.3(GPD1L):c.876G>A (p.Glu292=) rs72546642
NM_015141.3(GPD1L):c.981G>A (p.Val327=) rs144877595

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