ClinVar Miner

Variants in gene GPR179 with conflicting interpretations

Y axis minimum submission review status: Y axis collection method:
X axis minimum submission review status: X axis collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than two submissions, it may have multiple conflicts and therefore be counted in more than one conflict column. If this is the case, the "Variants with any kind of conflict" cell will be less than the sum of the conflicted variants cells to its left.

Variants with only 1 submission Variants with at least 2 submissions and no conflicts Variants with a synonymous conflict
(e.g. benign vs non-pathogenic)
Variants with a confidence conflict
(e.g. benign vs likely benign)
Variants with a benign or likely benign vs uncertain conflict Variants with a category conflict
(e.g. benign vs affects)
Variants with a clinically significant conflict
(e.g. benign vs pathogenic)
Variants with any kind of conflict
125 8 0 5 7 0 1 13

Significance breakdown #

In the table below, cells that correspond to a term paired with itself represent synonymous conflicts, i.e. variants that have been annotated with different terms that map to the same standard term. To compare the terms that were actually submitted, check the box in the filters section at the top of this page.

pathogenic likely pathogenic uncertain significance likely benign benign
pathogenic 0 1 1 0 0
likely pathogenic 1 0 0 0 0
uncertain significance 1 0 0 5 2
likely benign 0 0 5 0 4
benign 0 0 2 4 0

All variants with conflicting interpretations #

Total variants: 13
Download table as spreadsheet
HGVS dbSNP
NM_001004334.3(GPR179):c.1478A= (p.His493=) rs4550493
NM_001004334.3(GPR179):c.2022C>T (p.Asp674=) rs79623844
NM_001004334.3(GPR179):c.2392G>A (p.Ala798Thr) rs78470373
NM_001004334.3(GPR179):c.3454T>C (p.Ser1152Pro) rs149252987
NM_001004334.3(GPR179):c.3847C>T (p.Pro1283Ser) rs150125328
NM_001004334.3(GPR179):c.4709C>T (p.Thr1570Met) rs187512697
NM_001004334.3(GPR179):c.4888G>C (p.Glu1630Gln) rs149998444
NM_001004334.3(GPR179):c.5563C>G (p.Leu1855Val) rs79954845
NM_001004334.3(GPR179):c.5605C>G (p.Gln1869Glu) rs4399578
NM_001004334.3(GPR179):c.5975G>A (p.Gly1992Asp) rs200936863
NM_001004334.3(GPR179):c.6824T>C (p.Leu2275Pro) rs148601715
NM_001004334.3(GPR179):c.799_803delCAGGTinsTGATCTAC (p.Gln267_Leu602delinsTer) rs886043488
NM_001004334.3(GPR179):c.984delC (p.Ser329Leufs) rs770066665

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