ClinVar Miner

Variants in gene IL7R with conflicting interpretations

Y axis minimum submission review status: Y axis collection method:
X axis minimum submission review status: X axis collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than two submissions, it may have multiple conflicts and therefore be counted in more than one conflict column. If this is the case, the "Variants with any kind of conflict" cell will be less than the sum of the conflicted variants cells to its left.

Variants with only 1 submission per condition Variants with at least 2 submissions on the same condition and no conflicts Variants with a synonymous conflict
(e.g. benign vs non-pathogenic)
Variants with a confidence conflict
(e.g. benign vs likely benign)
Variants with a benign or likely benign vs uncertain conflict Variants with a category conflict
(e.g. benign vs affects)
Variants with a clinically significant conflict
(e.g. benign vs pathogenic)
Variants with any conflict
214 20 0 3 11 0 0 14

Significance breakdown #

In the table below, cells that correspond to a term paired with itself represent synonymous conflicts, i.e. variants that have been annotated with different terms that map to the same standard term. To compare the terms that were actually submitted, check the box in the filters section at the top of this page.

uncertain significance likely benign benign
uncertain significance 0 8 3
likely benign 8 0 3
benign 3 3 0

All variants with conflicting interpretations #

Total variants: 14
Download table as spreadsheet
NM_002185.5(IL7R):c.1007A>G (p.Glu336Gly) rs770237630
NM_002185.5(IL7R):c.1020T>G (p.Leu340=) rs138731184
NM_002185.5(IL7R):c.1096T>C (p.Ser366Pro) rs201671392
NM_002185.5(IL7R):c.1165G>C (p.Asp389His) rs143596606
NM_002185.5(IL7R):c.1316C>G (p.Thr439Ser) rs148931962
NM_002185.5(IL7R):c.132C>T (p.Ser44=) rs11567704
NM_002185.5(IL7R):c.152C>T (p.Ser51Leu) rs138482569
NM_002185.5(IL7R):c.197T>C (p.Ile66Thr) rs1494558
NM_002185.5(IL7R):c.339A>C (p.Glu113Asp) rs11567735
NM_002185.5(IL7R):c.412G>A (p.Val138Ile) rs1494555
NM_002185.5(IL7R):c.561G>A (p.Lys187=) rs11567764
NM_002185.5(IL7R):c.602A>G (p.Tyr201Cys) rs145810271
NM_002185.5(IL7R):c.707G>A (p.Gly236Glu) rs201084372
NM_002185.5(IL7R):c.778G>A (p.Ala260Thr) rs147153824

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