ClinVar Miner

Variants in gene LRRC6 with conflicting interpretations

Y axis minimum submission review status: Y axis collection method:
X axis minimum submission review status: X axis collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than two submissions, it may have multiple conflicts and therefore be counted in more than one conflict column. If this is the case, the "Variants with any kind of conflict" cell will be less than the sum of the conflicted variants cells to its left.

Variants with only 1 submission Variants with at least 2 submissions and no conflicts Variants with a synonymous conflict
(e.g. benign vs non-pathogenic)
Variants with a confidence conflict
(e.g. benign vs likely benign)
Variants with a benign or likely benign vs uncertain conflict Variants with a category conflict
(e.g. benign vs affects)
Variants with a clinically significant conflict
(e.g. benign vs pathogenic)
Variants with any kind of conflict
40 5 5 4 3 0 1 13

Significance breakdown #

In the table below, cells that correspond to a term paired with itself represent synonymous conflicts, i.e. variants that have been annotated with different terms that map to the same standard term. To compare the terms that were actually submitted, check the box in the filters section at the top of this page.

pathogenic uncertain significance likely benign benign
pathogenic 5 1 0 0
uncertain significance 1 0 2 1
likely benign 0 2 0 4
benign 0 1 4 0

All variants with conflicting interpretations #

Total variants: 13
Download table as spreadsheet
HGVS dbSNP
NM_012472.6(LRRC6):c.1162G>A (p.Gly388Ser) rs77289466
NM_012472.6(LRRC6):c.1245A>G (p.Lys415=) rs149631064
NM_012472.6(LRRC6):c.1391C>T (p.Pro464Leu) rs139131485
NM_012472.6(LRRC6):c.1397T>C (p.Ile466Thr) rs9297853
NM_012472.6(LRRC6):c.220G>C (p.Ala74Pro) rs397514596
NM_012472.6(LRRC6):c.283C>T (p.Leu95=) rs74599901
NM_012472.6(LRRC6):c.436G>C (p.Asp146His) rs200321595
NM_012472.6(LRRC6):c.574C>T (p.Gln192Ter) rs141945265
NM_012472.6(LRRC6):c.576dup (p.Glu193fs) rs397515425
NM_012472.6(LRRC6):c.598_599del (p.Lys200fs) rs397515424
NM_012472.6(LRRC6):c.609C>T (p.Asn203=) rs35956157
NM_012472.6(LRRC6):c.77_78TC[1] (p.Ser27fs) rs769220870
NM_012472.6(LRRC6):c.914+13A>G rs113135637

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