Variants in gene LYST with conflicting interpretations "benign" and "likely benign"

Submission 1 (benign) minimum review status:		Submission 1 (benign) method:
Submission 2 (likely benign) minimum review status:		Submission 2 (likely benign) method:
Gene type: Distinguish antisense genes from sense genes
Show significances as they were submitted (without aggregation into standard terms)
		ClinVar version:

Total variants with conflicting interpretations: 47

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HGVS	dbSNP	gnomAD frequency
NM_000081.4(LYST):c.2355T>C (p.Leu785=)	rs3768066	0.10928
NM_000081.4(LYST):c.4392C>T (p.Asn1464=)	rs11583387	0.09239
NM_000081.4(LYST):c.5024-43T>G	rs7543060	0.04336
NM_000081.4(LYST):c.3989A>C (p.Asp1330Ala)	rs74641549	0.04030
NM_000081.4(LYST):c.3713-26G>A	rs9803890	0.04021
NM_000081.4(LYST):c.5923-19G>T	rs141197189	0.03063
NM_000081.4(LYST):c.7137A>C (p.Leu2379=)	rs61738992	0.02884
NM_000081.4(LYST):c.10374+33A>G	rs17615059	0.02070
NM_000081.4(LYST):c.9C>T (p.Thr3=)	rs33998267	0.01172
NM_000081.4(LYST):c.5945C>T (p.Thr1982Ile)	rs146591126	0.00669
NM_000081.4(LYST):c.10941-7C>A	rs72761794	0.00614
NM_000081.4(LYST):c.5518T>G (p.Ser1840Ala)	rs115330112	0.00485
NM_000081.4(LYST):c.-5C>T	rs141317482	0.00475
NM_000081.4(LYST):c.10800+4G>T	rs41308172	0.00441
NM_000081.4(LYST):c.6482A>C (p.Glu2161Ala)	rs147756847	0.00416
NM_000081.4(LYST):c.1686G>C (p.Gln562His)	rs77091385	0.00394
NM_000081.4(LYST):c.4863-19T>C	rs150288597	0.00393
NM_000081.4(LYST):c.5291G>C (p.Gly1764Ala)	rs35413645	0.00350
NM_000081.4(LYST):c.6292G>A (p.Ala2098Thr)	rs146091043	0.00315
NM_000081.4(LYST):c.5223T>C (p.Leu1741=)	rs7530527	0.00277
NM_000081.4(LYST):c.2363+4T>C	rs201398337	0.00252
NM_000081.4(LYST):c.8487C>T (p.Ile2829=)	rs144597913	0.00126
NM_000081.4(LYST):c.7506A>G (p.Gln2502=)	rs140434436	0.00106
NM_000081.4(LYST):c.6588A>G (p.Gly2196=)	rs34423788	0.00093
NM_000081.4(LYST):c.3507C>T (p.Leu1169=)	rs74861744	0.00083
NM_000081.4(LYST):c.8368A>C (p.Lys2790Gln)	rs138506576	0.00061
NM_000081.4(LYST):c.2363+10dup	rs760632806	0.00058
NM_000081.4(LYST):c.2946T>C (p.Tyr982=)	rs145892183	0.00034
NM_000081.4(LYST):c.2313G>A (p.Gln771=)	rs147220685	0.00031
NM_000081.4(LYST):c.6782G>A (p.Arg2261His)	rs147791378	0.00031
NM_000081.4(LYST):c.368A>G (p.His123Arg)	rs3768067	0.00027
NM_000081.4(LYST):c.1494A>G (p.Arg498=)	rs201412615	0.00013
NM_000081.4(LYST):c.6258G>A (p.Glu2086=)	rs771882274	0.00006
NM_000081.4(LYST):c.8607A>G (p.Gln2869=)	rs369484787	0.00004
NM_000081.4(LYST):c.9804A>G (p.Pro3268=)	rs368740409	0.00004
NM_000081.4(LYST):c.11085C>T (p.Leu3695=)	rs767062870	0.00001
NM_000081.4(LYST):c.9045-4A>G	rs769310836	0.00001
NM_000081.4(LYST):c.11268-5del	rs36014994
NM_000081.4(LYST):c.11268-6_11268-5del	rs36014994
NM_000081.4(LYST):c.5023+14G>A
NM_000081.4(LYST):c.5461-13_5461-12dup	rs557545474
NM_000081.4(LYST):c.5461-3del	rs557545474
NM_000081.4(LYST):c.5461-3dup	rs557545474
NM_000081.4(LYST):c.6122-13del	rs201404906
NM_000081.4(LYST):c.6570C>T (p.Val2190=)	rs1572170906
NM_000081.4(LYST):c.9162+11G>A
NM_000081.4(LYST):c.9785-21_9785-17del	rs547173744

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