ClinVar Miner

Variants in gene PCARE with conflicting interpretations

Y axis minimum submission review status: Y axis collection method:
X axis minimum submission review status: X axis collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than two submissions, it may have multiple conflicts and therefore be counted in more than one conflict column. If this is the case, the "Variants with any kind of conflict" cell will be less than the sum of the conflicted variants cells to its left.

Variants with only 1 submission per condition Variants with at least 2 submissions on the same condition and no conflicts Variants with a synonymous conflict
(e.g. benign vs non-pathogenic)
Variants with a confidence conflict
(e.g. benign vs likely benign)
Variants with a benign or likely benign vs uncertain conflict Variants with a category conflict
(e.g. benign vs affects)
Variants with a clinically significant conflict
(e.g. benign vs pathogenic)
Variants with any conflict
501 23 0 7 8 0 0 15

Significance breakdown #

In the table below, cells that correspond to a term paired with itself represent synonymous conflicts, i.e. variants that have been annotated with different terms that map to the same standard term. To compare the terms that were actually submitted, check the box in the filters section at the top of this page.

pathogenic likely pathogenic uncertain significance likely benign benign
pathogenic 0 1 0 0 0
likely pathogenic 1 0 0 0 0
uncertain significance 0 0 0 4 4
likely benign 0 0 4 0 6
benign 0 0 4 6 0

All variants with conflicting interpretations #

Total variants: 15
Download table as spreadsheet
HGVS dbSNP
NM_001029883.3(PCARE):c.1297C>T (p.Pro433Ser) rs200696965
NM_001029883.3(PCARE):c.2063G>A (p.Cys688Tyr) rs149601594
NM_001029883.3(PCARE):c.2191G>A (p.Val731Ile) rs201790782
NM_001029883.3(PCARE):c.2418C>T (p.Pro806=) rs189042259
NM_001029883.3(PCARE):c.2600C>T (p.Pro867Leu) rs182248363
NM_001029883.3(PCARE):c.2864G>A (p.Arg955Gln) rs184249075
NM_001029883.3(PCARE):c.3058C>A (p.Gln1020Lys) rs201355503
NM_001029883.3(PCARE):c.3059A>G (p.Gln1020Arg) rs200367963
NM_001029883.3(PCARE):c.3114G>C (p.Val1038=) rs140790266
NM_001029883.3(PCARE):c.3178C>A (p.Pro1060Thr) rs72861054
NM_001029883.3(PCARE):c.3447G>A (p.Pro1149=) rs200278694
NM_001029883.3(PCARE):c.3669-2AGC[4]
NM_001029883.3(PCARE):c.3739G>A (p.Gly1247Ser) rs187333111
NM_001029883.3(PCARE):c.920T>A (p.Leu307Ter)
NM_001029883.3(PCARE):c.99G>A (p.Gln33=) rs146455733

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