ClinVar Miner

Variants in gene SLX4 with conflicting interpretations

Y axis minimum submission review status: Y axis collection method:
X axis minimum submission review status: X axis collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than two submissions, it may have multiple conflicts and therefore be counted in more than one conflict column. If this is the case, the "Variants with any kind of conflict" cell will be less than the sum of the conflicted variants cells to its left.

Variants with only 1 submission Variants with at least 2 submissions and no conflicts Variants with a synonymous conflict
(e.g. benign vs non-pathogenic)
Variants with a confidence conflict
(e.g. benign vs likely benign)
Variants with a benign or likely benign vs uncertain conflict Variants with a category conflict
(e.g. benign vs affects)
Variants with a clinically significant conflict
(e.g. benign vs pathogenic)
Variants with any kind of conflict
328 44 0 40 21 0 0 55

Significance breakdown #

In the table below, cells that correspond to a term paired with itself represent synonymous conflicts, i.e. variants that have been annotated with different terms that map to the same standard term. To compare the terms that were actually submitted, check the box in the filters section at the top of this page.

uncertain significance likely benign benign
uncertain significance 0 15 12
likely benign 15 0 40
benign 12 40 0

All variants with conflicting interpretations #

Total variants: 55
Download table as spreadsheet
HGVS dbSNP
NM_032444.2(SLX4):c.*8A>G rs3751839
NM_032444.2(SLX4):c.1637A>G (p.Tyr546Cys) rs150547487
NM_032444.2(SLX4):c.422G>T (p.Gly141Val) rs77306735
NM_032444.2(SLX4):c.5501A>G (p.Asn1834Ser) rs111738042
NM_032444.3(SLX4):c.1152A>G (p.Pro384=) rs112511042
NM_032444.3(SLX4):c.1153C>A (p.Pro385Thr) rs115694169
NM_032444.3(SLX4):c.1156A>G (p.Met386Val) rs113490934
NM_032444.3(SLX4):c.1163+10C>T rs80116508
NM_032444.3(SLX4):c.1366+11T>C rs76350200
NM_032444.3(SLX4):c.1371T>G (p.Asn457Lys) rs74319927
NM_032444.3(SLX4):c.1707G>A (p.Pro569=) rs141687678
NM_032444.3(SLX4):c.1755C>T (p.Pro585=) rs114016359
NM_032444.3(SLX4):c.1803G>A (p.Ser601=) rs144892556
NM_032444.3(SLX4):c.1898G>A (p.Gly633Asp) rs1056085
NM_032444.3(SLX4):c.1911G>T (p.Ser637=) rs200013924
NM_032444.3(SLX4):c.2012T>C (p.Leu671Ser) rs77985244
NM_032444.3(SLX4):c.2034T>G (p.Val678=) rs200278096
NM_032444.3(SLX4):c.2235C>T (p.Thr745=) rs75184268
NM_032444.3(SLX4):c.231A>G (p.Gln77=) rs143279888
NM_032444.3(SLX4):c.2359G>A (p.Glu787Lys) rs140600202
NM_032444.3(SLX4):c.2746G>T (p.Ala916Ser) rs79448721
NM_032444.3(SLX4):c.2786C>T (p.Pro929Leu) rs117707719
NM_032444.3(SLX4):c.2824G>C (p.Glu942Gln) rs114014006
NM_032444.3(SLX4):c.2844G>A (p.Ala948=) rs376877866
NM_032444.3(SLX4):c.2854G>A (p.Ala952Thr) rs59939128
NM_032444.3(SLX4):c.2854_2855delGCinsAT (p.Ala952Met) rs863224277
NM_032444.3(SLX4):c.2855C>T (p.Ala952Val) rs78637028
NM_032444.3(SLX4):c.2924C>T (p.Pro975Leu) rs114472821
NM_032444.3(SLX4):c.2975G>A (p.Gly992Glu) rs139287784
NM_032444.3(SLX4):c.3162G>A (p.Ser1054=) rs76488917
NM_032444.3(SLX4):c.3662C>T (p.Ala1221Val) rs3827530
NM_032444.3(SLX4):c.3783G>A (p.Pro1261=) rs77699867
NM_032444.3(SLX4):c.3812C>T (p.Ser1271Phe) rs3810813
NM_032444.3(SLX4):c.3857C>T (p.Ala1286Val) rs149011965
NM_032444.3(SLX4):c.3868C>A (p.His1290Asn) rs112596894
NM_032444.3(SLX4):c.3963G>A (p.Pro1321=) rs116781836
NM_032444.3(SLX4):c.4068G>A (p.Pro1356=) rs115491049
NM_032444.3(SLX4):c.4115G>A (p.Arg1372Gln) rs79174372
NM_032444.3(SLX4):c.4241C>T (p.Pro1414Leu) rs140892471
NM_032444.3(SLX4):c.4338C>T (p.Thr1446=) rs77718962
NM_032444.3(SLX4):c.4347G>A (p.Leu1449=) rs373300793
NM_032444.3(SLX4):c.4494G>A (p.Leu1498=) rs146532299
NM_032444.3(SLX4):c.4581G>A (p.Pro1527=) rs78635099
NM_032444.3(SLX4):c.4600G>A (p.Gly1534Ser) rs78770603
NM_032444.3(SLX4):c.4648C>T (p.Arg1550Trp) rs77021998
NM_032444.3(SLX4):c.467C>A (p.Thr156Lys) rs144614070
NM_032444.3(SLX4):c.5029C>T (p.Pro1677Ser) rs7196345
NM_032444.3(SLX4):c.5146T>A (p.Ser1716Thr) rs75182789
NM_032444.3(SLX4):c.5281C>T (p.Arg1761Cys) rs143818824
NM_032444.3(SLX4):c.555C>T (p.Asp185=) rs74640850
NM_032444.3(SLX4):c.590T>C (p.Val197Ala) rs147826749
NM_032444.3(SLX4):c.610C>T (p.Arg204Cys) rs79842542
NM_032444.3(SLX4):c.710G>A (p.Arg237Gln) rs138615800
NM_032444.3(SLX4):c.718A>G (p.Asn240Asp) rs114744903
NM_032444.3(SLX4):c.742G>A (p.Glu248Lys) rs148547201

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