ClinVar Miner

Variants in gene SLX4 with conflicting interpretations

Y axis minimum submission review status: Y axis collection method:
X axis minimum submission review status: X axis collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than two submissions, it may have multiple conflicts and therefore be counted in more than one conflict column. If this is the case, the "Variants with any kind of conflict" cell will be less than the sum of the conflicted variants cells to its left.

Variants with only 1 submission per condition Variants with at least 2 submissions on the same condition and no conflicts Variants with a synonymous conflict
(e.g. benign vs non-pathogenic)
Variants with a confidence conflict
(e.g. benign vs likely benign)
Variants with a benign or likely benign vs uncertain conflict Variants with a category conflict
(e.g. benign vs affects)
Variants with a clinically significant conflict
(e.g. benign vs pathogenic)
Variants with any conflict
863 37 0 35 8 0 0 43

Significance breakdown #

In the table below, cells that correspond to a term paired with itself represent synonymous conflicts, i.e. variants that have been annotated with different terms that map to the same standard term. To compare the terms that were actually submitted, check the box in the filters section at the top of this page.

uncertain significance likely benign benign
uncertain significance 0 8 2
likely benign 8 0 35
benign 2 35 0

All variants with conflicting interpretations #

Total variants: 43
Download table as spreadsheet
HGVS dbSNP
NM_032444.4(SLX4):c.*8A>G rs3751839
NM_032444.4(SLX4):c.1152A>G (p.Pro384=) rs112511042
NM_032444.4(SLX4):c.1153C>A (p.Pro385Thr) rs115694169
NM_032444.4(SLX4):c.1156A>G (p.Met386Val) rs113490934
NM_032444.4(SLX4):c.1163+10C>T rs80116508
NM_032444.4(SLX4):c.1366+11T>C rs76350200
NM_032444.4(SLX4):c.1371T>G (p.Asn457Lys) rs74319927
NM_032444.4(SLX4):c.1372A>G (p.Lys458Glu) rs149126845
NM_032444.4(SLX4):c.1637A>G (p.Tyr546Cys) rs150547487
NM_032444.4(SLX4):c.1755C>T (p.Pro585=) rs114016359
NM_032444.4(SLX4):c.1803G>A (p.Ser601=) rs144892556
NM_032444.4(SLX4):c.1925-30G>A rs149916101
NM_032444.4(SLX4):c.2012T>C (p.Leu671Ser) rs77985244
NM_032444.4(SLX4):c.2013+23G>A rs112226642
NM_032444.4(SLX4):c.2160+50C>T rs75762935
NM_032444.4(SLX4):c.2359G>A (p.Glu787Lys) rs140600202
NM_032444.4(SLX4):c.2681T>G (p.Val894Gly) rs145137472
NM_032444.4(SLX4):c.2746G>T (p.Ala916Ser) rs79448721
NM_032444.4(SLX4):c.2786C>T (p.Pro929Leu) rs117707719
NM_032444.4(SLX4):c.2824G>C (p.Glu942Gln) rs114014006
NM_032444.4(SLX4):c.2924C>T (p.Pro975Leu) rs114472821
NM_032444.4(SLX4):c.3162G>A (p.Ser1054=) rs76488917
NM_032444.4(SLX4):c.3365C>T (p.Pro1122Leu) rs714181
NM_032444.4(SLX4):c.3368C>A (p.Ser1123Tyr) rs144647122
NM_032444.4(SLX4):c.3662C>T (p.Ala1221Val) rs3827530
NM_032444.4(SLX4):c.3783G>A (p.Pro1261=) rs77699867
NM_032444.4(SLX4):c.3812C>T (p.Ser1271Phe) rs3810813
NM_032444.4(SLX4):c.3963G>A (p.Pro1321=) rs116781836
NM_032444.4(SLX4):c.4115G>A (p.Arg1372Gln) rs79174372
NM_032444.4(SLX4):c.4261A>T (p.Ile1421Phe) rs141567438
NM_032444.4(SLX4):c.4338C>T (p.Thr1446=) rs77718962
NM_032444.4(SLX4):c.4500T>C (p.Asn1500=) rs3810812
NM_032444.4(SLX4):c.4581G>A (p.Pro1527=) rs78635099
NM_032444.4(SLX4):c.5029C>T (p.Pro1677Ser) rs7196345
NM_032444.4(SLX4):c.5501A>G (p.Asn1834Ser) rs111738042
NM_032444.4(SLX4):c.555C>T (p.Asp185=) rs74640850
NM_032444.4(SLX4):c.590T>C (p.Val197Ala) rs147826749
NM_032444.4(SLX4):c.610C>T (p.Arg204Cys) rs79842542
NM_032444.4(SLX4):c.678C>T (p.His226=) rs28516461
NM_032444.4(SLX4):c.708G>A (p.Ala236=) rs765742613
NM_032444.4(SLX4):c.710G>A (p.Arg237Gln) rs138615800
NM_032444.4(SLX4):c.753G>A (p.Ala251=) rs8061528
NM_032444.4(SLX4):c.90C>T (p.Ser30=) rs118089506

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