ClinVar Miner

Variants in gene TECPR2 with conflicting interpretations

Y axis minimum submission review status: Y axis collection method:
X axis minimum submission review status: X axis collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than two submissions, it may have multiple conflicts and therefore be counted in more than one conflict column. If this is the case, the "Variants with any kind of conflict" cell will be less than the sum of the conflicted variants cells to its left.

Variants with only 1 submission per condition Variants with at least 2 submissions on the same condition and no conflicts Variants with a synonymous conflict
(e.g. benign vs non-pathogenic)
Variants with a confidence conflict
(e.g. benign vs likely benign)
Variants with a benign or likely benign vs uncertain conflict Variants with a category conflict
(e.g. benign vs affects)
Variants with a clinically significant conflict
(e.g. benign vs pathogenic)
Variants with any conflict
354 50 0 2 28 0 0 30

Significance breakdown #

In the table below, cells that correspond to a term paired with itself represent synonymous conflicts, i.e. variants that have been annotated with different terms that map to the same standard term. To compare the terms that were actually submitted, check the box in the filters section at the top of this page.

pathogenic likely pathogenic uncertain significance likely benign benign
pathogenic 0 1 0 0 0
likely pathogenic 1 0 0 0 0
uncertain significance 0 0 0 24 4
likely benign 0 0 24 0 1
benign 0 0 4 1 0

All variants with conflicting interpretations #

Total variants: 30
Download table as spreadsheet
NM_014844.5(TECPR2):c.1335C>T (p.Asn445=) rs778115838
NM_014844.5(TECPR2):c.1397AGA[5] (p.Lys471del) rs572609303
NM_014844.5(TECPR2):c.1546G>A (p.Val516Met)
NM_014844.5(TECPR2):c.1606G>C (p.Gly536Arg) rs186595127
NM_014844.5(TECPR2):c.1788A>G (p.Gly596=)
NM_014844.5(TECPR2):c.1792G>A (p.Gly598Arg)
NM_014844.5(TECPR2):c.1872G>A (p.Ala624=) rs145129878
NM_014844.5(TECPR2):c.2514G>C (p.Pro838=) rs140913653
NM_014844.5(TECPR2):c.2700C>T (p.Ser900=) rs545614481
NM_014844.5(TECPR2):c.2967G>A (p.Thr989=)
NM_014844.5(TECPR2):c.3108G>A (p.Gln1036=) rs140351132
NM_014844.5(TECPR2):c.3282G>A (p.Lys1094=) rs199835341
NM_014844.5(TECPR2):c.3399G>A (p.Thr1133=) rs765318084
NM_014844.5(TECPR2):c.3416del (p.Leu1139fs) rs751970061
NM_014844.5(TECPR2):c.3474G>T (p.Ser1158=) rs376646346
NM_014844.5(TECPR2):c.3507C>T (p.Ala1169=) rs775448295
NM_014844.5(TECPR2):c.3790-8G>A rs772801372
NM_014844.5(TECPR2):c.3990C>T (p.Asn1330=) rs757779692
NM_014844.5(TECPR2):c.4033G>A (p.Ala1345Thr) rs77170608
NM_014844.5(TECPR2):c.4161G>A (p.Ser1387=) rs150885756
NM_014844.5(TECPR2):c.423A>G (p.Lys141=) rs756199626
NM_014844.5(TECPR2):c.516A>G (p.Pro172=) rs142385149
NM_014844.5(TECPR2):c.623C>T (p.Thr208Ile) rs144870163
NM_014844.5(TECPR2):c.669A>C (p.Pro223=)
NM_014844.5(TECPR2):c.726A>T (p.Leu242=) rs748794723
NM_014844.5(TECPR2):c.846C>T (p.Cys282=) rs201691545
NM_014844.5(TECPR2):c.879A>G (p.Ser293=) rs770891190
NM_014844.5(TECPR2):c.952-5G>A rs55716270
NM_014844.5(TECPR2):c.978C>T (p.Ser326=) rs142082203
NM_014844.5(TECPR2):c.999G>A (p.Ser333=) rs369972265

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